BGIOSGA030266

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Revision as of 09:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030266| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030266, complete gene.| tag = OsI_303...")
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Gene Name

BGIOSGA030266

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030266, complete gene.

LocusTag

OsI_30352

Ensembl Transcript ID

BGIOSGA030266-TA

Ensembl Protein ID

BGIOSGA030266-PA

Length

7012

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:186344..193355

Sequence Coding Region

186344..186397,189838..190088,190991..191143,191561..191719,191814..191955
,192128..192179,192294..192335,192449..192497,193205..193355

Genome Context

<gbrowseImage1> name=IndicaChromosome09:186344..193355 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:186344..193355 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGGGAGATGCAGACACATACCGTTACAGCGAAGTAATAATATGGAAACAGGCTACGCTAGGAAATTTTGACCATTCTGGTTGGGTCCTTGTTGAATGCAAGGTTGGTGACCAGGGGCTCGTGAAGGTTGCTGCCCTAAATCCTGAAACTGCTCCAGTTGCCCCCCTAGAGCTGGAATTTGAGGAGAACAAGAATGTGGTTTTATCAGTCCATGGTCAGAACTCAGTACACTTATCAGGATACTACATCTGTTCTTACAATGGTGACTATGGTGAAAACAGCAAACAAGCCACTAAAGAAACGGTCTCGAAAGATGATGGTGCTGCTGAAAACAATGATGAAAAACAAGGGGATGAAGCTAAACAGTCTAAAAATGTACAGGCCGAACTGCAGCCTCACATTCGCGTACTTGATAGTGACCATGGTGAAAACAGCAAGCAAGCCACTAAAGAAATGGAATCCAATGCAATGGATGAAGATGCATCTCTTGGCCTAGAGCATACTCTGGGAGGCAATGTGGTTCAAGCTGCTAGTCAGGAGGAAAATGCTTCACAAACTCCTGAGGATAATGATGCTGCAGATCATATTATCCAACAAACTGACCCTCCTATCCTGGTCTCAGAAGATGATGGTACTGCCGAAGACAATGATGAGGCCGAACTGCAGCCTCGCATTCGTGTACTTGATAGTGGTATGACAATAGAAGATCTGGCCAAGGGAAATGTTGGTGCCAAAATTGCATCTTGTGGCAAAAAGGTTTATGTGAAGTATGTCTGTATGTTGAGCAATGGTGATGTTGATCCTACCGGTGCTGGAGAAGTCATTAGTGGATGGGATCTTGGTATCGATGGCATGCGTGTAGGTGGAATAAGGAGACTTGGCATTCCTCCCCATCTAGGCTATGGTGATGTTGGAAGAGGAAACATACCACCAAACGCGTGGCTCAACTTTGATATCGAACTGCTGAAAGTCAAGAGTGGACGCAAGAAGGCACGGAAAGTAAAGAAGTCTAGGAGAGCGGCAGCAGAAACTTCTTCCACTGCACGCTAG</cdnaseq>

Protein Sequence

<aaseq>MWGDADTYRYSEVIIWKQATLGNFDHSGWVLVECKVGDQGLVKVAALNPETAPVAPLELEFEENKNVVLSVHGQNSVHLSGYYICSYNGDYGENSKQATKETVSKDDGAAENNDEKQGDEAKQSKNVQAELQPHIRVLDSDHGENSKQATKEMESNAMDEDASLGLEHTLGGNVVQAASQEENASQTPEDNDAADHIIQQTDPPILVSEDDGTAEDNDEAELQPRIRVLDSGMTIEDLAKGNVGAKIASCGKKVYVKYVCMLSNGDVDPTGAGEVISGWDLGIDGMRVGGIRRLGIPPHLGYGDVGRGNIPPNAWLNFDIELLKVKSGRKKARKVKKSRRAAAETSSTAR</aaseq>

Gene Sequence

<dnaseqindica>1..54#3495..3745#4648..4800#5218..5376#5471..5612#5785..5836#5951..5992#6106..6154#6862..7012#ATGTGGGGAGATGCAGACACATACCGTTACAGCGAAGTAATAATATGGAAACAGGTAATTACACCTACGCTGTACTCTTTGACAGGCGGTACTGCTTAAGTCGTCAGAAAAATCATGGTTTCAAGCTAAAGTAAAGGCGCTCAAACATCAGGTGCATTACATCAAGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGAGCCCTCCGCCCTCCGTATGTCCCCGCTTGCTCGGTCGGCCTCCGCCTCCGTCGCCGGCCGCCGTCGTCCTTGGGCCCCTTCCGCCACCCACAACTGGCTCTGCCCCCGCGCGCTGCCGTCCTCACCTCACCGCCCCCACGCTCCTCCGCCGCCTCCGCCTCCTCCTCCGCACCGACGTCCTGAGCGTCGACGTCCACGCCGTCCGCGCCGCCCTCTGCGCTGTCCTCGCCGACCGCCCACACCGACCACCCATCCCCGCGCCGTCCTCGCTGACCGCCCGCGCCCACCGCCTGTCCTTGTTGTGTTCGCTGCGCGAGAGAGATAATAGAGAGGGGAAGAAAGTATGACATGTGGGTCCCACGTTTTTTATTAAATAAAATGCTGACTGGACTGCCACGCGTACGCCACGTAGACTAAAACCACCATGAATTGGGCCGAGGGGGGTAATTCGTTCAGTTTGCATAGTTGAGGGTGAAGAATGTCCGATTTTGTGGTTCAGGGGGTAATTCGGACGACCGTGATAGTTCGGGGGGTAATTCGTAATTTTTCCAACTAATAATAATAATACAAATACATTTTTTTAAGAGATGCATTTGATTTGATAGTGCAGTAGCGAGGTGTGCGTGGTTTCAGCCCTAAGATCCCGTGTTCAATCCCAACACACTCACAATTCCTTCTTAAAAAAATGTTTTCTCGTGCCAAATCTTTTTTTTTCTTCAAAGTTTTTTTTTTTTTTTTTGCTTCGTTTACTCTTCTACGGCCCAGCCAGTCAGAGCCCAATAATTGCAAGACATCACAAGGCTTTGAAAATTTTTACCATGTTTTCGCAATGATTGAATGAATTTTATGAGATGTCTGTATGTTCGATGCATGATGTTGTGTGGTTGAAGCGAAATTTATTTGGATCCTACTAGTAGATGGAAAGTGAAAGTGTGTGCGTTGAAACCGGAATTTATCGTTTGCGGGGAAAATTTAGCATTTGCTTAAACTTTACGTGGAATATCAATTGGAGTAGTAATATACTCCGACGACACTACACTAATGCGTACTCCCTCCGTTAAAAAAAAAGACAAACCCTGGTTTCCATGTCCAACGTTTGACCATCCGTCTTATTTGAAAAAAATATGAAAAAAATTAAAAAAACAAGTTACGCATAAAGTATTAATCATGTTTTATCATCTAACAACAATAAAAATACTAATTATAACAAAATTTCATATAAGACGAACAGTCAAACGTTAGCACGGAAACCTAGGGTTTGACTTTTTTTTTTTTGACGGAGGGAGTAATTAAGGAGCTAGCTAGCCGTCCAAGTGAGAGTGACTGACACAGACACAGGATGAGAGCGGCTGTTGGGCTTCTTCCCCTTCAACCCACTACCACTAGCAGGCAGCAGCGTCCTTTCCGCTTCCTCCTTTCTTCTCTTATATATAGCACCACACCTCTTCCTTGGCTCTTCCGCCGGGGCAGTGCAGTGGAGCTCCCAGCTTAGATCATGTCGTTCTGGGTACTCCTACTAGCCTACTATTACTCTGCTTCCATTTTCATATACTACTCCTACATTACTTCATAATCTATCTATCTATCCCTACATTGGTTGATTGATTCTTTGTTTGCTACTCCGATCCTACATTGGATTGGATTGGATTGGATGTTGCAGGCGCGGTGGTGAGTGCGGGGAAACCCTACGTCGTTCGGCCCTCCGACGCCGGCGGCCGTCGCCTTCGGGTTACCCAGGTCCCTCCCTCCCGCAGCTTAATCCTTTCTTCTCTTGCCTTAATTACATGCATTAATCTAGCTCTCTTCTTTCCCAGTTTTCCATGTCTTCTTTCTTGCTCTTTATACCAATCTACTACTCCACCACTATTTTTTTTCCTTTGGTTTTCTTTAATGTCTGTTTTGCTCGCAAACATCATGATTTCTACAGGAAAAGAACATGGCCTTTAATTATTCCAAGTGTACATATTTTCTTGACAAACTTTTACTACTTCATACATCTCACATGCATTATGCATGAGTTATTCAGAAATTTTAACTGCATGTTCTCGCAAGTCGCAAACTGATCACTATCTGAAGAGTTGCAGAATTTCTTGTTTGCAAATATGGGTTTAGTAGTTCTATAGCAGTTTTTATTGTACTCTTCATACATTACACTAGCATATATACGTCTAATATATGGAGGAGACCCTAAACATTAATGGTACTTGAAGTTGTAATTAACCCACAATTTGGTCCCGCAAACTTGGTTACCATTTTGCTCTGCCTCCAGTATATTTTTTCTTTACCCAGAACAGACATCGTAACCATCCTTCAGTTTTTTTTTTTAACCATTCACCTATCCAACTTTCAATATTATTAGCTATGTATTTTTCTTTAATTCCTGTCCTTGTGCAATCATATGCACCGCTGTATTGATTTTGCAGTTCCCTGCCGCTCAATTAAATACACAATTTTATTCAATTATATATATGGATTTCCAAGTTTGTAACTTGAAAAAGTAAGAGTGACATGTCTATTCTATAACATAGACGAATGATCTAAACATTCTCACCCAGATTTAATAGGACCAACACCAGAGTTTACCTTGGTTAATTAAGTATGTTTTATATTTCCCTATCCTTTTACAAAGCTTCAAAATTCATTTCAGACTATGACTCGGTTAATTTCATTTTATTGTACCAATTTGCACTTCCACAGTAGTTTAGAACTGGTGCATAGACTAATTGATCCAAATAGTGGTTCATAACAATGTGCAAATGCAATGTAATTATACCTATCTCAATTTTAGTTAGTCCATTTTGTTTTAGAACTAGAAGTCATTAAACTGGAAACTTTTAAACAACAAAAAATGCTTCAGGCTTATTCTGATAGTTTTAGTTTTTTGGTAACCTTGTGGATAAAATCTTAATATAAGCTGTGCAATTTTCATAAAATGCAAATTCTATGATTTGAAACACTAAAACTGCTTGTCATCCAGCACTCTCTCGTTTATAATTCAACTTCATAGTACGATTGTTTAATTAGCTTGCTGGTGGCAAAAAGCCAAATTGCTTGCATTCATCTAAAACTTTTCATAAATTAATGATTGTTCATGTTTTGCTATTGATTATTGTGGACTCAGTCAAGAATTATGCGACCTTAGCACTATCACATGTACTATTTGTATAGATAAAGTAATCTGTGTTTCTGTTTCTGCACTAAATTAACCCCATCAAAACAAGTTTTTCACAACTAAATTAATATTCAGACCTGATGGTTTATTATTTCAGGCTACGCTAGGAAATTTTGACCATTCTGGTTGGGTCCTTGTTGAATGCAAGGTTGGTGACCAGGGGCTCGTGAAGGTTGCTGCCCTAAATCCTGAAACTGCTCCAGTTGCCCCCCTAGAGCTGGAATTTGAGGAGAACAAGAATGTGGTTTTATCAGTCCATGGTCAGAACTCAGTACACTTATCAGGATACTACATCTGTTCTTACAATGGTGACTATGGTGAAAACAGCAAACAAGCCACTAAAGAAACGTAATGTATCTTCTGAATTCAATCTTCGGTGTTTACATTTTTTTGTGAATTTTTGTAGCTCTTTGCTTAAGTATGCAAGCGGATTGCCCTGCAAACCTGTGCTCATAGGCCAATTTCGCAGGCCAGTGTTGGCTTGTGAAAATTGCCTAATAAGCAGGTTAGCGGTCCAGCCCACTTGTATCCCTATCTTTTCTTTGTAAGGAGTCCTTTTTTTTTTTGGTATTAATAGAAGGTAGTGTAAGATGGTAGCTGGTGAAAATATTGCTATAGATCAAGTGAATGAGAAAATGAATTTTAAAATCATCTAAGTATGTATTCCAAAAATCTGGAAAAATTGAATGATTCACATTTCCCTATTTTTTGTTATGGTACTCTTTTATCTATAATGCGGTGTTTTCCTTGTTCAATAGGAAGTCCAATATATGCAATAGATGGAAATGCATATCTTGACCTAGAGCATACTCTAGGAGGCAATGTGGTTCAAGCTGCTAGTCAGGAGGAAAATGCTTCACAAACTCATGAGGATTTTTTTTTTTAGATAATGGAAGCTTTATTAATCTCAGTAAATTTCATCAAGTGATACAACTATTCTTAGAGCACCTCCGGCTTCTGCACCTAAAGAGTGCACACAGCCAACAAGAACGAAACAAAAGATAAACTCATTATCCAAAATAGCAGGAACAAAAATAACTTCAGGAGCCCTCTAACCATAGCCTAGAACGCCACCCATGTGCCGGGGTAGAAAACTCATGAGGATAATGATGCTACACGTCACATTATCCAACAAACTAAACCTCCTATCCTGTAAATAAAATCTGTCACCTCCCTTGTCATCATATATTTTTTCGTGATCTGTAACTATATATGTGTTGCTACAATGTAGTTGATTTATATCTTTGTAGGGTCTCGAAAGATGATGGTGCTGCTGAAAACAATGATGAAAAACAAGGGGATGAAGCTAAACAGTCTAAAAATGTACAGGCCGAACTGCAGCCTCACATTCGCGTACTTGATAGTGACCATGGTGAAAACAGCAAGCAAGCCACTAAAGAAATGTAATGTATCTTCTGAATTCAATCTTCCAGTTCCTTGGTCAGTGTACAATATAAAATGAATCAGTGTTTACATTTTATGTGAAATGTTATAACTCTTTGCTTAAGTATGCAAGTGGAATATACCCTTCAAAAACCTGTGCTTATAGACCATTTTTGCGGGCCAGTGTTGGCTCGTGAAAATTGCCTATAATAAGGAATCATTTTTCTATGTACGGAATTATTATTTTAATATTGATAGAAGGTAGTGTAAGATGGTAGCTGGTCAAAATGTTGCTATAGATCAAGTGAATGAGAAAATGAATTCTAAAATCATCTAAGTATATATTCCAAAAATCTGGAAAAATTGAATGACTCACATTTCCCTATATTTTTGGATTGTTACTCTATCTATAATGCGGTGTTTTCCTTGTTCAATAGGGAATCCAATGCAATGGATGAAGATGCATCTCTTGGCCTAGAGCATACTCTGGGAGGCAATGTGGTTCAAGCTGCTAGTCAGGAGGAAAATGCTTCACAAACTCCTGAGGATAATGATGCTGCAGATCATATTATCCAACAAACTGACCCTCCTATCCTGTAAATGAAATCTGCCACCTCTCTTGTCAGAATATTTTCATGATTCGTAACTATATATGTGTTGTCACAATATATTTGATTTATATCTTTGTAGGGTCTCAGAAGATGATGGTACTGCCGAAGACAATGATGAGGCCGAACTGCAGCCTCGCATTCGTGTACTTGATAGTGGTATGACAATAGAAGATCTGGCCAAGGGAAATGTTGGTGCCAAAATTGCATCTTGTGGCAAAAAGGTCATTCCAAACCTTCTTCTGCATCTTACTAGACTCTGTCTAGGATAGACAAATATGCAGACTGTATTAATTAGCACTTCACTAGTTCTGCAAGTATCTCTTTCTTTATATGTTATGAAGATTTATCAGGCGAAAAAAAATCGTTTTAACCAATCCAACAATACTTATTCAGGTTTATGTGAAGTATGTCTGTATGTTGAGCAATGGTGATGTTGATCCTACCGGTGAAAGTTCCACTTGCAAATTCAAACTTGGTAAAAGATTAACGAATGCCCTCTTCTCTGTTTCATTATTGATTTCTTTGATACTCACACAAGAAACTTCCTTGTTGGTTGCAGGTGCTGGAGAAGTCATTAGTGGATGGGATCTTGGTATCGATGGTTATAATCTTAACACAAAAGCTAATATTTTATATATGGGAATACAGCAGTCTGAAATTTCACCCTTTTTTAATGATTATTGTTGGAATTAAGTTCTATCCCACATTTTGTAGGCATGCGTGTAGGTGGAATAAGGAGACTTGGCATTCCTCCCCATCTAGGGTAAGCATGTGAATTTCTTCCCTTCTCATTGTTATTATTAATTGATAATCTATCAATAGTTCTACTGATTATGAACAAATTGACTAAACTTTTCATATTACTGTGCATCATGGTGCCATGTCTATATATATAGCATAATAGCACTATCTTTAGAGGTTGTATCAGACGGTGGTGTGTGTTTTGGTAAGCATTAAGTCTTTACCTGTTGTTATTTCTAAGAAGCCATTGATTTTACCAATTGATTCACTAGAGTGCAATTCACTAGAGTCAATGCACTTCTTTTAATTCACTAGTCTTCTGTAGAACTTTTTTTAGAATTATTTATTGTTTAGTACTCTTATCAGAAATGGTGATACCTGAATCACAAATTCACAATGGTTATTTTGATTTACAATACCTGCCTATCAGTGTCGAGAAGTGGCTGTTGTAGGGCTTAATAGGAATGTAACCTATCAAAAGCTACTGTATAAGTGGCCCCATAATTCTTTTATAATTACTACTTTCTGGGTGACCAAATGAATAGTTGTATATTTTTTCTTGAATGTGCGATAGAGCTGTATATATTCGATTTCATGAACATGCAACTCATTATCTTTTCTCTCGAATATGTGTGCAGTTTTCTATTAATTTGCTTTTACAATTTCTGGTTGAAATGAAATTAAGATGATACCTCGTTTAATTAATTTCTTGGGTGCACTTGTTTCCAGCTATGGTGATGTTGGAAGAGGAAACATACCACCAAACGCGTGGCTCAACTTTGATATCGAACTGCTGAAAGTCAAGAGTGGACGCAAGAAGGCACGGAAAGTAAAGAAGTCTAGGAGAGCGGCAGCAGAAACTTCTTCCACTGCACGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030266