BGIOSGA030302

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Revision as of 09:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030302| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030302, complete gene.| tag = P0415D0...")
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Gene Name

BGIOSGA030302

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030302, complete gene.

LocusTag

P0415D04.44

Ensembl Transcript ID

BGIOSGA030302-TA

Ensembl Protein ID

BGIOSGA030302-PA

Length

5482

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:1463309..1468790

Sequence Coding Region

1463309..1463494,1463841..1463886,1463959..1463978,1464185..1464271,1465578..1465754
,1465927..1466013,1466087..1466158,1466913..1468790

Genome Context

<gbrowseImage1> name=IndicaChromosome09:1463309..1468790 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:1463309..1468790 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCCAAGGAGGCGCCCCCGCCGCCGCCGCCCCAGTCCCCGTCCTCCACCGAGGAGGAAGGGATGCTCTCCGTCACGGCCGCTATGGCCAGAGACGCCGCCGTGCTGTTCCAGAGCCGCCGCTACGCCGACTGCGCCGAGGTGCTCGCGCAGCTCCTGCTCAAGAAGGAGGGCGACCCCAAGTTTCATGTTGTGTTTGATGCATGCGTAGACATGGATGTCCACACTGGGCATGATCTGTTTAATAAGGTCCTTCACAATATGGCTATTGCAGAATCTTTCTTGGATGGTTGTCCTGACCCAAAGAAATTGCTTGAAATTCTAGGCAATGTTAAGAGAAGAAGTGAAGAGCTTGCCTGTGCATCTAGACAACAAACTGATTCTGCCAATGGGACAGGAAACAGTGTTTCTTCTGGATCAAGAGGGAGTGGCATTATACCTCTGATTTCTGCTGCAAATAATGCGACAACCTATGGGGATGAGTTTGACACAACCATAATAACATTCAACACTGCTGTTATCCTTTACCATCTTCACGATTATGAATCTGCACTATCTATTTTGGATCCACTCTACCGAAATATTGAACCAATTGATGAGACAACTGCTCTTCATGTATGCTTTCTGTTGTTGGATATTACATTAGCTTTGCAAGATGCATCGAATGCCGCGGATATAATTCAGTACTTGGAAAGGTCATTTGGAGTAGTTAGCGCAACAAACCAGAATGAAAATGCTAATACAGCTCAGCAGCAGCAGTCAGCTCAACCAAAGCCTTCTGCAAAGATTAGCACACCTCCAGATTCTGATTCAAATACTTGTGCTGGTGGATCTGAGAACCTTTCAGCAGGAAATTTTTCTGATGATACACTTGAGTTTGAATCTTTTTACTCTACCTTGGATGGTGGTAATCAGAACTTGGGCAGACCAATTTTAAATGATTTCTCAAGGGCTTCAGCTGATCTTGCTGCCACTGCTGCTGATTTGAAAGTTAGACTGCAAATATACAAGGTCCGGCTTCTGCTTCTTACTAGGAACCTTAAGGTTGCAAAGCGAGAACTGAAAGTTCTGATGAACATGGCACGTGGTAGGGATTCATCAACAGAGCTTCTCCTGAAATCTCAGTTGGAATATGCCAGAGGAAACTATCGCAAGGCTGTGAAGCTGCTGAGCACACCCAATAATCGGAGTGAACCAGCAATGCTGGCCATGTTCTACAATAATCTTGGTTGCATACTCCACCAACAGAGATCTATTCAAACCTCAGTATGGTGCTTCAGCAAAGCATTGAAATATAGCTTATCACTTCGTTCAGAGAAACCATGCAAGCTGACCGCAATATCGCAAGACAAATCTTGTCTTATTTCATACAACTGCGGCATCCAACATTTGATGTGCGGGAAACCTTTGTTAGCAGCTCGCTGTTTTCGTGAAGCCATGCCGCTCTTGTGCAACAGGTCCCTCTTTTGGCTCCGTTTTGCTGAGTGTAGCCTGCTAGCTCTGGAAAAGGGTATCCTGACTTCAAGTGGTGCTACTTCGTGCAATGATGAGATTGAAGTTGATGTTATGGGGTCAGGAAAATGGCGGCACTTAGTTATAAACCCAGTGAAGCCAAGTCATTCTTCAGAATCTGGGGAGGAGGTAAGTTTGGACAAATATGGAAATCTGATATCCCTTAGATTTGCTAGACAGTGTCTACTCAATGCCCAAATTTTATTGGATCCCTCTACGAAGGAAAATCTGGTGATTGCATCAGGCACAGAGGAGTCGAATCAAACATCACTGCAAGGCCAGAAAGGCTCAGGTCAGAAGAACACCACTAATACAGATTCCAAACCGCCTGGTCCAGCACTAACTAATGCAAATGGAGAACAGAAGGGAATTTCAAACTTGAATGTCACCTTGCAGAGCTCTCTTGCTTTGTATGATGACATATGTAGAAAAGAGAACCTCAAAATTAAACAAGCCATCTTGGGGGACCTTGCATTTATTGAGTTGTGTCTTCAGAATCACTTGAAAGCTTTGTCTATTGCCAAGTTGCTACAGCAGCTGCCAGAATGTTCCAGGATGTATGTTTTCCTCAGCCATGTATACGCAGCTGAAGCTCTTTGTGCACTGAATAGACCAAAGGAGGCTGCTGAGCAATTAACTGTTTATTTGAGAGATGGCGATGATATTGAGTTGCCTTACAGCATTGAGAACTGCGAGAAAGCCCTTGTTGAGAAAGACAGCGATGGTGAAGATTCAGTTGCTCCGGTAGTCACAAAATTGTCCTCAGGAGAATCTCAGTATTCAGAAAGCCTCAAGCCTGAGGAAGCTCAGGGTGTTCTTTATATTGACCTAGGCATGACAGCTGCAGTGCAGGGAGAGCTTGAGCAGGCTAACTATATGGTAAGCCGTGGCGTTGCCTTGTTGCCCAACAACCCCAGGGCAGTGCTAGCATCAGTTTATGTGGACCTTCTTCAAGGGAAGGCACAAGAAGCAATCGCCAAGTTGAGACGATGTAGAACTGTGAGATTTAGGAGGCATAGTGTAGCAGTCAGCAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MEPKEAPPPPPPQSPSSTEEEGMLSVTAAMARDAAVLFQSRRYADCAEVLAQLLLKKEGDPKFHVVFDACVDMDVHTGHDLFNKVLHNMAIAESFLDGCPDPKKLLEILGNVKRRSEELACASRQQTDSANGTGNSVSSGSRGSGIIPLISAANNATTYGDEFDTTIITFNTAVILYHLHDYESALSILDPLYRNIEPIDETTALHVCFLLLDITLALQDASNAADIIQYLERSFGVVSATNQNENANTAQQQQSAQPKPSAKISTPPDSDSNTCAGGSENLSAGNFSDDTLEFESFYSTLDGGNQNLGRPILNDFSRASADLAATAADLKVRLQIYKVRLLLLTRNLKVAKRELKVLMNMARGRDSSTELLLKSQLEYARGNYRKAVKLLSTPNNRSEPAMLAMFYNNLGCILHQQRSIQTSVWCFSKALKYSLSLRSEKPCKLTAISQDKSCLISYNCGIQHLMCGKPLLAARCFREAMPLLCNRSLFWLRFAECSLLALEKGILTSSGATSCNDEIEVDVMGSGKWRHLVINPVKPSHSSESGEEVSLDKYGNLISLRFARQCLLNAQILLDPSTKENLVIASGTEESNQTSLQGQKGSGQKNTTNTDSKPPGPALTNANGEQKGISNLNVTLQSSLALYDDICRKENLKIKQAILGDLAFIELCLQNHLKALSIAKLLQQLPECSRMYVFLSHVYAAEALCALNRPKEAAEQLTVYLRDGDDIELPYSIENCEKALVEKDSDGEDSVAPVVTKLSSGESQYSESLKPEEAQGVLYIDLGMTAAVQGELEQANYMVSRGVALLPNNPRAVLASVYVDLLQGKAQEAIAKLRRCRTVRFRRHSVAVSS</aaseq>

Gene Sequence

<dnaseqindica>1..186#533..578#651..670#877..963#2270..2446#2619..2705#2779..2850#3605..5482#ATGGAGCCCAAGGAGGCGCCCCCGCCGCCGCCGCCCCAGTCCCCGTCCTCCACCGAGGAGGAAGGGATGCTCTCCGTCACGGCCGCTATGGCCAGAGACGCCGCCGTGCTGTTCCAGAGCCGCCGCTACGCCGACTGCGCCGAGGTGCTCGCGCAGCTCCTGCTCAAGAAGGAGGGCGACCCCAAGGTAGCCGATTCGCCATCTCTGCTTCGGGGTGATTAGTTGGGTTAGGTCCTTCCTCGCTAAACGACAAAATCTTTTACCGAATCCATCTGCTTCTCTAGGTTATATCTTGCTTGCTAGGTGTTCGTTAGTGGAGCTGCTTCCGCAGCATTATGGGTTGAGCTCGTGGGGTGAGTTGCGAGTTTGCGTATGTTAATCTAGGCAGTTGGGTGCATCTTGCCTCCGTGTTTGCGTAGATGTCTGCATATTTCACCTGTATGTGCGTTATGGTCTGTGTGTGATATGCAGGTGGGTGCATCTTGAATTATTGGGTTTGTGTTTGCATGCTTGTTAATTTGTATTTCATCAGTTTCATGTTGTGTTTGATGCATGCGTAGACATGGATGTCCACACTGGTATGTGTCACCCAGTATGTGCTTCTCCTCGTGCATGATTCTAATTACTTATCTTGTCCATTTCATGTATAGGGCATGATCTGTTTAATAAGGTTATAAGTCTGAAAGAACAATATGCATACAAATAGGACAAAAAACAATTACCCGATATCTGTGTATACTGCATATTATGCTCTTAGATGCTTTTCTACGGTGGTTATCTTGAACTGGTAGCTTTTCCACTATATCTTGATAAAGAGATGATACTCTGATCATGTATTATTTTGGCATCTGATATTGCATTTTTATAATCTTTCAGGTCCTTCACAATATGGCTATTGCAGAATCTTTCTTGGATGGTTGTCCTGACCCAAAGAAATTGCTTGAAATTCTAGGCAATGTTAAGGTTAGTGAATTTGCATTAGTTTGTTTGACTTTTGATGTTCATATTTCCATTGAGGCTATGTACTAGAAATATCCATTCTTTTGTCAGTAGAGAACTCTACAGCTAAGTTACTGTTTGTACAGGAGTTTCTGATTTTTTTTGGGTGAAATTTCTGTTTTCCAAATGTACCTAAAATTTTCTTGGCAACAATAATTCAAACCTAAAACTATGTTTACTTTTTTTTTCTTATATAAATTCATTCCAATTGTAAATTTGGTTATACAAGAAATGATATAATTTTGATGTTTGTCACTTTAGTCCAATCATTTAGTTAGTGTCAATTATATGTTACTAACTATACTTAGTTCTCAAAAGGACAGTCTTCTTGTTCTGCCCTGTTTTCCTTCATCCATTCGCCGTGGGTCTTATCATTTTGCACAACTCATCTATGTTTCAGTTCCAATTTCAAATTTGTTCTTTTCCTTCTTCTGGGTTGATGAAGATATTTGTCACATGCTACATGCACGAAAATTTATTTTGTTTTGTGTATAGTAAACTTTAACATCTACATTTTATTTGTGTTTGTTGTATGTGTATATGTTGTATATGGTAAAAGCATCCCTCATTAGTCAGGAGTTATGTGATGCATTAATGCACAAAACAGAAGGCATATAACATGCTACATGTTGAGAGTAGTCATAATATCTTGACTTGCGTGCATTTTGATCGACATCTATCAGTGAGGGGCTCAAAACTTATATTTAGTTATGAGCCATTATTTCTTCTTTTTTGAATAAATCTGGACCTAACGGTAGTCTTTGTATTCCACAATTTACGATTCTTCATTGATGGGAAGTAAGAAACAATATTACAAATGCTGGTTTTGTCAAAGGTTTCTAACTTTTATGTAAATGCTGTTAATGCTGACCAAAGAAAACCATATATTCTTTTTTGTAGTGGATGAACTTATACCTATATTTTTTTCAGATGTGATATCATCACTATATGTTTGGAACTCACATTAGGTTCTCAGACTCCATTTTTATTCGTCATTCAAGTTGCGCATATAAATATCTAATATTATGCAGCATGCCAGTTATTCAGTCATTTACACAACTGCACACATATCACTGTAACGTGTTATGGTCGTCCCCTAACCACTTACATCTACTTATAGCATTGGAGCCATCTACTTTTGTGTGGCTTTAAGCCTTAATTTATGGTGCCTGTTTTGATTTCTCATTTTCTCTTATTATGTCATTGTTTTATTCTCCTGATTTAATAATTATTTACGAAAATTCTAATGTTCCACCTTACATGCATCCAGAGAAGAAGTGAAGAGCTTGCCTGTGCATCTAGACAACAAACTGATTCTGCCAATGGGACAGGAAACAGTGTTTCTTCTGGATCAAGAGGGAGTGGCATTATACCTCTGATTTCTGCTGCAAATAATGCGACAACCTATGGGGATGAGTTTGACACAACCATAATAACATTCAACACTGTATGATCTTTTCTTTTGCAAAAGTAATTATTTGATTGTTTGATGTTTCTGGTCTATGGCTTGCATTAATTGTAGTACTGCTTTAGCCAATCAACCATGGTAAGCATTGTAATTGGTGTGAGCTTTAACTGAAGAGGTGATTGATTTGTTTATGGCATTTTTGAATTTGCAGGCTGTTATCCTTTACCATCTTCACGATTATGAATCTGCACTATCTATTTTGGATCCACTCTACCGAAATATTGAACCAATTGATGAGGTATTATTAGTTATAAGATGCTTAACTTGGAAACCAGGTTGTTACATTTTCTAATATTTCTTCAATACTGCAGACAACTGCTCTTCATGTATGCTTTCTGTTGTTGGATATTACATTAGCTTTGCAAGATGCATCGAATGCCGCGGTAAGTTTTAACATCTCAGTATATCGTGAGTTGATGCTACAAATACTACATTAGCTTTGTGGGCTTATGGGTATTTTGTCAATAGATTCTCCTGAAAATGCAATACATGCTGTGTCTCGTCTGTTTGATGCATAAAAATTAAAAAAAATGTCTTCCTCCTTGGCATTGGTGCATATGCCAATATTTACCACTTATGATGTTTTACATTCATTGTTATCTACATTTTTTCCCAAAAATATGCTCCATGGTGTCAAAATACCCTTCCATAACTAGTTCCCTTTTTTGTCAAATTTTGACTGGAATGCATTTCGTGCAATTTTTCCCTATATTTATTTAATATTACAAAATAGAACTACCATATATTGTTTTCTGTTTTGTCCTAAATTGCAGTATTAACACAACAATCCAAGATGACCAAATTCTCATGTTTTCATATGTTGTTAATTTTAGAAGTACCATGCGTGAACACTCATTGTAACAAAAAAGAAGTGATTCAATGCAAAAAATTCACATTTACCTGTTCTGAACGATTTTAGGGCTTCCATTATTCACTTTTATCCATTCCAAATGATGATTATGCCTTTCCACGTGAGAATTACTGAACTCAAGTGCCTAAGATTGTCAGATATAGTTGTGATCTTAACTTGTATGGCGAACCGTACCATTTTTGTTTGTCCTTTTTATTCAAAGTTGCAGCATTAGCTCTTGTATAAAGCATCTTATTCAACTGCATGCATCACATATGTTTGTACAGGATATAATTCAGTACTTGGAAAGGTCATTTGGAGTAGTTAGCGCAACAAACCAGAATGAAAATGCTAATACAGCTCAGCAGCAGCAGTCAGCTCAACCAAAGCCTTCTGCAAAGATTAGCACACCTCCAGATTCTGATTCAAATACTTGTGCTGGTGGATCTGAGAACCTTTCAGCAGGAAATTTTTCTGATGATACACTTGAGTTTGAATCTTTTTACTCTACCTTGGATGGTGGTAATCAGAACTTGGGCAGACCAATTTTAAATGATTTCTCAAGGGCTTCAGCTGATCTTGCTGCCACTGCTGCTGATTTGAAAGTTAGACTGCAAATATACAAGGTCCGGCTTCTGCTTCTTACTAGGAACCTTAAGGTTGCAAAGCGAGAACTGAAAGTTCTGATGAACATGGCACGTGGTAGGGATTCATCAACAGAGCTTCTCCTGAAATCTCAGTTGGAATATGCCAGAGGAAACTATCGCAAGGCTGTGAAGCTGCTGAGCACACCCAATAATCGGAGTGAACCAGCAATGCTGGCCATGTTCTACAATAATCTTGGTTGCATACTCCACCAACAGAGATCTATTCAAACCTCAGTATGGTGCTTCAGCAAAGCATTGAAATATAGCTTATCACTTCGTTCAGAGAAACCATGCAAGCTGACCGCAATATCGCAAGACAAATCTTGTCTTATTTCATACAACTGCGGCATCCAACATTTGATGTGCGGGAAACCTTTGTTAGCAGCTCGCTGTTTTCGTGAAGCCATGCCGCTCTTGTGCAACAGGTCCCTCTTTTGGCTCCGTTTTGCTGAGTGTAGCCTGCTAGCTCTGGAAAAGGGTATCCTGACTTCAAGTGGTGCTACTTCGTGCAATGATGAGATTGAAGTTGATGTTATGGGGTCAGGAAAATGGCGGCACTTAGTTATAAACCCAGTGAAGCCAAGTCATTCTTCAGAATCTGGGGAGGAGGTAAGTTTGGACAAATATGGAAATCTGATATCCCTTAGATTTGCTAGACAGTGTCTACTCAATGCCCAAATTTTATTGGATCCCTCTACGAAGGAAAATCTGGTGATTGCATCAGGCACAGAGGAGTCGAATCAAACATCACTGCAAGGCCAGAAAGGCTCAGGTCAGAAGAACACCACTAATACAGATTCCAAACCGCCTGGTCCAGCACTAACTAATGCAAATGGAGAACAGAAGGGAATTTCAAACTTGAATGTCACCTTGCAGAGCTCTCTTGCTTTGTATGATGACATATGTAGAAAAGAGAACCTCAAAATTAAACAAGCCATCTTGGGGGACCTTGCATTTATTGAGTTGTGTCTTCAGAATCACTTGAAAGCTTTGTCTATTGCCAAGTTGCTACAGCAGCTGCCAGAATGTTCCAGGATGTATGTTTTCCTCAGCCATGTATACGCAGCTGAAGCTCTTTGTGCACTGAATAGACCAAAGGAGGCTGCTGAGCAATTAACTGTTTATTTGAGAGATGGCGATGATATTGAGTTGCCTTACAGCATTGAGAACTGCGAGAAAGCCCTTGTTGAGAAAGACAGCGATGGTGAAGATTCAGTTGCTCCGGTAGTCACAAAATTGTCCTCAGGAGAATCTCAGTATTCAGAAAGCCTCAAGCCTGAGGAAGCTCAGGGTGTTCTTTATATTGACCTAGGCATGACAGCTGCAGTGCAGGGAGAGCTTGAGCAGGCTAACTATATGGTAAGCCGTGGCGTTGCCTTGTTGCCCAACAACCCCAGGGCAGTGCTAGCATCAGTTTATGTGGACCTTCTTCAAGGGAAGGCACAAGAAGCAATCGCCAAGTTGAGACGATGTAGAACTGTGAGATTTAGGAGGCATAGTGTAGCAGTCAGCAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030302