BGIOSGA030324

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Revision as of 09:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030324| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030324, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030324

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030324, complete gene.

LocusTag

OSJNBA0020P07.10

Ensembl Transcript ID

BGIOSGA030324-TA

Ensembl Protein ID

BGIOSGA030324-PA

Length

2276

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2311989..2314264

Sequence Coding Region

2311989..2312257,2312334..2312544,2312691..2312884,2313107..2313184,2313324..2313571
,2313711..2314264

Genome Context

<gbrowseImage1> name=IndicaChromosome09:2311989..2314264 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:2311989..2314264 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATGGGGAGGTCTCTTCTTGAGCTTCAGCCGTCCCTCACAGGACCAACAGAAGTCATGCCTTTCAGCTGCTGGTGGTTTCAACTATGATGCGCCTCTCCATGGTGCCTCAAGACCAAAATCAGTAGCTAAATTGACTGCGGGAGATACTGAAGCAAGTGACAAAGCGCTTGTCGAGCGCGGCTTCTTCGTGAACCGTTCACGTGTTCTGGTTGGCTCTGGCACTACCACCTTCAACCATGCCAAATCCGCGCTTCTCTCCTGGAAGCATTTGGCACTAGGCTGGGCAAATGTGGAACCCGACACACCGGTGAAGGCTGGAACAAGGTTCTGCATTTGTTACAAGGAGCTGATCCCTTGGGTCATGTTGCCCCTCCAGATTGCCTATGTGACCGATGGCAATGGAGGCAACTCCTCAGGCCATGGAAAAGGCTGCGTTTTTGCTTATGGTAGCGGCACTCTACAAGGCCATCTGCTGGCAGGGGAGGAGAGGTTCTCGGTGCAGCTGGACGAAGACGATCAGGTGTGGTACGAGGTGATGTCCTTCTCGAAGCCAGCACACATCCTGTCCAGCCTCTGCTACCCGTACGTGCAGCTGAGGCAGAAGCATTTCGCGCATCAATCAGGGCAGGCACTGCTCAGGCATGTTGCCAGCCGCTCCAGGGACACACGATTTCCATGGTTTGTTACTAAATCAAAAGGAAGAATGAAAGATAAGCACAAGAGGAACCCCACAGTTCCACGGAACAGAAGAAGCTTTGCTAGTGCAAGTGTTCACTGTCACAACTTTCTTCGAAACTCGCAGCCAGACATTGCTGCACCAGGGGTTGCGATTTTAGCTGCTTCACCAAATACTCTAGAGTTCAAAGGTGTCCCCTACCATTTTGCTTCTGGAACATCTATGGCTTGCCCACATATATCTGGGATCATTGCCGTGCTCAAGTCCCTTCATCCTGAATGGTCCCCTGCTGCCCTCAAATCCGCAATCATGACTACAGCAAATACCTTTGACAACAATGGGATGCCTATACAAGCTAATGGAAGAGTTCCAAAGATTGCCGATCCCTTTGATTATGGAGCAGGCTTTGTTAATCCGATCATGGCAGCTGATCCAGGCCTCATCTATGACATCAACCCTTCTGATTACCTCAAGTTCTTCAACTGCATGGGAGGGCTAGGCTCACATGACAATTGCACGACGATAAAAGGACCCGTGATTGACTTGAACCTGCCATCGATTGCCATTCCCAACCTCAGGACATCCCAAACTGCAGTGCGCACTGTCACTAACGTTGGTGACCAGCATGATGCTGTGTACAAAGCTTTCCTCGAGCCTCCTGCAGGAATCGAGATGGCCGTGGAGCCACCAGAGCTGGTGTTCAGCAAGGACAAGAAGGATCAGAGCTTCAAGGTGACCTTCAAGGCGACACGGAAGGTCCATGGGGACTACACATTTGGAAGCTTGGCATGGCATGATGGAGGCAGCCACTGGGTTCGCATCCCCATCGCCGTTCGCAATGTGATTGAAGAGATATATTCCAATATTTCCTAA</cdnaseq>

Protein Sequence

<aaseq>MAWGGLFLSFSRPSQDQQKSCLSAAGGFNYDAPLHGASRPKSVAKLTAGDTEASDKALVERGFFVNRSRVLVGSGTTTFNHAKSALLSWKHLALGWANVEPDTPVKAGTRFCICYKELIPWVMLPLQIAYVTDGNGGNSSGHGKGCVFAYGSGTLQGHLLAGEERFSVQLDEDDQVWYEVMSFSKPAHILSSLCYPYVQLRQKHFAHQSGQALLRHVASRSRDTRFPWFVTKSKGRMKDKHKRNPTVPRNRRSFASASVHCHNFLRNSQPDIAAPGVAILAASPNTLEFKGVPYHFASGTSMACPHISGIIAVLKSLHPEWSPAALKSAIMTTANTFDNNGMPIQANGRVPKIADPFDYGAGFVNPIMAADPGLIYDINPSDYLKFFNCMGGLGSHDNCTTIKGPVIDLNLPSIAIPNLRTSQTAVRTVTNVGDQHDAVYKAFLEPPAGIEMAVEPPELVFSKDKKDQSFKVTFKATRKVHGDYTFGSLAWHDGGSHWVRIPIAVRNVIEEIYSNIS</aaseq>

Gene Sequence

<dnaseqindica>1..269#346..556#703..896#1119..1196#1336..1583#1723..2276#ATGGCATGGGGAGGTCTCTTCTTGAGCTTCAGCCGTCCCTCACAGGACCAACAGAAGTCATGCCTTTCAGCTGCTGGTGGTTTCAACTATGATGCGCCTCTCCATGGTGCCTCAAGACCAAAATCAGTAGCTAAATTGACTGCGGGAGATACTGAAGCAAGTGACAAAGCGCTTGTCGAGCGCGGCTTCTTCGTGAACCGTTCACGTGTTCTGGTTGGCTCTGGCACTACCACCTTCAACCATGCCAAATCCGCGCTTCTCTCCTGGAAGTAAAGCCCAAGAACTACAAATTTTGTTATGTTGTTCATCTGGTCTCCATAACCAAGCAAACTGGTGTATATCTAGGCATTTGGCACTAGGCTGGGCAAATGTGGAACCCGACACACCGGTGAAGGCTGGAACAAGGTTCTGCATTTGTTACAAGGAGCTGATCCCTTGGGTCATGTTGCCCCTCCAGATTGCCTATGTGACCGATGGCAATGGAGGCAACTCCTCAGGCCATGGAAAAGGCTGCGTTTTTGCTTATGGTAGCGGCACTCTACAAGGCCATCTGCTGGTACGCCTGCCTCCTAATCTCATCAAGTAACAATGAAACATTGTAGTACTCACTACTCAGTAATGTAAAATGTTCAGAATGCAGTGCAGAGTTGCAGGTGTTTTTTTACTGAATGAGTTGGATGATCATATTTTGATGGTTTGCAGGCAGGGGAGGAGAGGTTCTCGGTGCAGCTGGACGAAGACGATCAGGTGTGGTACGAGGTGATGTCCTTCTCGAAGCCAGCACACATCCTGTCCAGCCTCTGCTACCCGTACGTGCAGCTGAGGCAGAAGCATTTCGCGCATCAATCAGGGCAGGCACTGCTCAGGCATGTTGCCAGCCGCTCCAGGGACACACGGTGATCGACTTCGTCTCTGCAGATTTGATCTTTTCTTCAGGAGTAATCTTCGCATGTTGTGAGTGAGCCTGCTTGTATGTTCCTGTATCTATGTCCGAATCTGCTCCTGAGAGCATTATTAGTTTGTAGTTTGAATTTTTGAGCTCAGGGTAATTATTTAGCATTTGTGCTTTGTTGTTAAGTTTTAGATCAAATTGAGGTGTTATGGTGATGTAAATTCAGATTTCCATGGTTTGTTACTAAATCAAAAGGAAGAATGAAAGATAAGCACAAGAGGAACCCCACAGTTCCACGGAACAGGTAGAAGAGACGTCTTGCACCAGGCAAACGCCCCTTGTTTATAGTGATGAGAGTATGGATTATCTGTTTGTCCCCTTTACCATGGTAGTAGAGTACTCAATGGATTAGCAACTTTTTCCATGTCTGTCACTGTCACTAGAAGAAGCTTTGCTAGTGCAAGTGTTCACTGTCACAACTTTCTTCGAAACTCGCAGCCAGACATTGCTGCACCAGGGGTTGCGATTTTAGCTGCTTCACCAAATACTCTAGAGTTCAAAGGTGTCCCCTACCATTTTGCTTCTGGAACATCTATGGCTTGCCCACATATATCTGGGATCATTGCCGTGCTCAAGTCCCTTCATCCTGAATGGTCCCCTGCTGCCCTCAAATCCGCAATCATGACTACAGGTAACAGATTAATTTGTTTTCAAAAGAACATGTTGGACCTAGAGTTTTTACACTAATATTGCATGTCAAACCTGGCATCTAGACATCATTTGATGTATAGAATTAATAACATTTTAATCAATATATATCTTGCATGCAGCAAATACCTTTGACAACAATGGGATGCCTATACAAGCTAATGGAAGAGTTCCAAAGATTGCCGATCCCTTTGATTATGGAGCAGGCTTTGTTAATCCGATCATGGCAGCTGATCCAGGCCTCATCTATGACATCAACCCTTCTGATTACCTCAAGTTCTTCAACTGCATGGGAGGGCTAGGCTCACATGACAATTGCACGACGATAAAAGGACCCGTGATTGACTTGAACCTGCCATCGATTGCCATTCCCAACCTCAGGACATCCCAAACTGCAGTGCGCACTGTCACTAACGTTGGTGACCAGCATGATGCTGTGTACAAAGCTTTCCTCGAGCCTCCTGCAGGAATCGAGATGGCCGTGGAGCCACCAGAGCTGGTGTTCAGCAAGGACAAGAAGGATCAGAGCTTCAAGGTGACCTTCAAGGCGACACGGAAGGTCCATGGGGACTACACATTTGGAAGCTTGGCATGGCATGATGGAGGCAGCCACTGGGTTCGCATCCCCATCGCCGTTCGCAATGTGATTGAAGAGATATATTCCAATATTTCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030324