BGIOSGA030340

From RiceWiki
Revision as of 09:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030340| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030340, complete gene.| tag = OsI_305...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030340

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030340, complete gene.

LocusTag

OsI_30502

Ensembl Transcript ID

BGIOSGA030340-TA

Ensembl Protein ID

BGIOSGA030340-PA

Length

4310

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2827628..2831937

Sequence Coding Region

2827628..2828107,2828579..2828662,2829645..2829814,2831502..2831937

Genome Context

<gbrowseImage1> name=IndicaChromosome09:2827628..2831937 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:2827628..2831937 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGAAGCCACGAAGCGCTATGACTTCATTTGGGGTCTTGGGGGTCAAAGATGGCCTTCATCCTCCACGTGAACCTGTGCCCTCCAGGCTAGTGTTCGGGCGAGATGGCTGCTGCTCTCACTCCCGTTCCGCGCTGGCAGGGGAAAGACATAGGCCGTCGAGCTGGGACGTCCCTCCAGTGCACGGGGCTACGCCCACAAGGAGCTCTTCCTCCAGGCTGCAAGAAAACAAGGGCAGGTACTATGGAGGTGGCTACTGTCATGCGGCAGGTTCACCAATCAAAAGGGAAAGAACAAGGTCCCCATGGGGCAGGCGATCTCCATCCCCAGAGCTGCCGATGGCCCCTCGGGTGTTGCCGATGCTTTCTCTAGCTTCGCTAACGTCAGTGACTGTGCCACAGCAGGCGTCGCCCCTCGTTGTACATCCAGGCCCAGATCCAGCGCGCCCACTGCTACCTGATCCTCTATCCCCGTCGCAGGAAACAGAACTTGAATTTTTTGATCAAGACACAGTGAACAGGGTTCTAGGGCCTGCTTTTGTTGATAATTTATACTTCCTGCAGGAGGACAAAGAAAAGGAACCACTCAACTTCTACCGACAGCATTTAGGTGAACATAGGGAGCACACCTCTACGACTAACTTCGGCTTCTTACAGGAACTAGTACAAGACCTTTCAGAACTCGATGAACCTTTCACAAAGGATGAAAACAAAATAGCAGTCTTCCAATCTAGCTGGCTAATGGTGCAAAAGAAAATCCTATCCTCGGACAAGCTTCAGTTTAGGGGCTGGGATAAAAGCCCAATTTGCTCACTCTGTGGTATAGAGCCTGAAACAAGTGTGCACCTCTTCATGGAGTGCTTTTATGCGAGACATGTATGGAACAACATCTGGCTGAAGCTAGGCCTTCAGATTCCATCACTGTCTCCCTTTAATGGTGACATGCTTGAGTGGGGGAAAGCTTCTAGGAAGCAAATGATCAAAGAACAAAGGAGGTATTTCAACGGTTTAATCATCTACACAACATGGGGAATTTGGCTCCAAAGAAATTATCAAGTCTTTAATGATGCACATGGCTCGGTGCAACAAGTGGTGAATTCCATCATCACCATGTGCAAAGCCTACGATGAAGCCTACGATGAAGCGATCAGTTGTCTTTGCAACATTTGA</cdnaseq>

Protein Sequence

<aaseq>MKKPRSAMTSFGVLGVKDGLHPPREPVPSRLVFGRDGCCSHSRSALAGERHRPSSWDVPPVHGATPTRSSSSRLQENKGRYYGGGYCHAAGSPIKRERTRSPWGRRSPSPELPMAPRVLPMLSLASLTSVTVPQQASPLVVHPGPDPARPLLPDPLSPSQETELEFFDQDTVNRVLGPAFVDNLYFLQEDKEKEPLNFYRQHLGEHREHTSTTNFGFLQELVQDLSELDEPFTKDENKIAVFQSSWLMVQKKILSSDKLQFRGWDKSPICSLCGIEPETSVHLFMECFYARHVWNNIWLKLGLQIPSLSPFNGDMLEWGKASRKQMIKEQRRYFNGLIIYTTWGIWLQRNYQVFNDAHGSVQQVVNSIITMCKAYDEAYDEAISCLCNI</aaseq>

Gene Sequence

<dnaseqindica>1..480#952..1035#2018..2187#3875..4310#ATGAAGAAGCCACGAAGCGCTATGACTTCATTTGGGGTCTTGGGGGTCAAAGATGGCCTTCATCCTCCACGTGAACCTGTGCCCTCCAGGCTAGTGTTCGGGCGAGATGGCTGCTGCTCTCACTCCCGTTCCGCGCTGGCAGGGGAAAGACATAGGCCGTCGAGCTGGGACGTCCCTCCAGTGCACGGGGCTACGCCCACAAGGAGCTCTTCCTCCAGGCTGCAAGAAAACAAGGGCAGGTACTATGGAGGTGGCTACTGTCATGCGGCAGGTTCACCAATCAAAAGGGAAAGAACAAGGTCCCCATGGGGCAGGCGATCTCCATCCCCAGAGCTGCCGATGGCCCCTCGGGTGTTGCCGATGCTTTCTCTAGCTTCGCTAACGTCAGTGACTGTGCCACAGCAGGCGTCGCCCCTCGTTGTACATCCAGGCCCAGATCCAGCGCGCCCACTGCTACCTGATCCTCTATCCCCGTCGCAGGTGTTGCCGTTGATTGCGCCAGCCGCCGCTGGCCCGATTTTAGATGAGATCGCCCTTCTCCCTTAGGTATGGCGGGTGGAGCAGCCACTACAGAAGCCAAACCAGGAAATGCAGGGGAAGCTCGTGGCTTTCCTAAGTTAAGTTTTTGAGCAGGTCTAGCCCCCTCTGTTCCCAACTTCTCCAAGACAGGCGCCCAAAGGCAGGGTGCTCAAAAGGAGCCCCACCAGGCTCTCACAGGGAGGGAGGAGAAGCGAGCGCTTGGCCAGAAGTCGATGGAGAATTTTGTTGTGCCATAACAGTCTTGTGCCTAGACAACAGCTAGCCTCAATTACTCAGGTGTTTGCTTCCAATGATGACAACAAATGAATGTGCACTCCTAAGTTGGAATGTTAGGGGTCTAAATTCAAATGCGTGTCAACAGGTGGTCAAAATTTGGTGAGACACATGAAGTGCTCTTGTGTGTGCTTGCAGGAAACAGAACTTGAATTTTTTGATCAAGACACAGTGAACAGGGTTCTAGGGCCTGCTTTTGTTGATAATTTATACTTCCTGCAGGTACTGAGAATAAGGTGGAGGCATTATACGGGCTGCCTCGGATAGAAAATATTTAATAAGCATGGTCCAGGTGAGCACACATACAGTCTCGGCAACATTAACAGAATTGGAAGATGGCTCAGTATGGAGTATCACAGGTGTTTATGTCCCATAACTTGACAACGAAAAATGAGAATTCATGGAGGAGCTGAAACAAATAAAAAAGGAAATGAATCCAAATTGGATTATTGTTGGTGACTTCAACTTGATAGTGCAGGACAATGACTAAAACAACAACAACCTCAACAGGGGTCTAATGCAATCCTTCAGGGCTACCTTAAACTTTATCGAGGTGATAGAAATCAAGCTAAATGGTCGACGCTACACTTGGTTTAGTGAAACAGACTCACCGACTTTATCGAAGATAGACAGGGTGTTCTGTACTCAAAACTGGGAGGAGCGCTTCCCCAATTGCCTACTAGCTGCAGTCTCCACCTTGGTGTCAAACCACCGCCCGCAGCTCTTCACTACCAATCCCGAGCGACCCAAAAGTAACTTCTTCACATTCTAACAATACTAGACTCGTCTTGTAGGGTTCATCGAGACGGTGCAGTAGGCTACAGTTTTCTCAATAGATGCAATCAAGTGCCTGCATACTAAGCTAACAAGAAATGCAAACGTGCTGAAAGGATGGAACAGGGGCAGGATCGGAATAATAAAAACCAGAATAGAGATAGCTCGCGAGCTAATCTACAGGCTTGACTTAGCATAGGAATAAAGATGTCTCTCACAGGAGAAGATTGCTTTCAGGCAGTTCCTAAAACAAAAACTGCTAGACCACACTGCCTTGGACAAAGTCCGCTTATGTCAATGATCCAGACAAAGTTAGATTAGAGCACGGGATGCAAATACCTGGTTCTTCCAAATAAAAGCTAGTGCAACGAAAAGAAAAAAAAACTTCATTCAGCATCTTCTGACCGACGATGGCTTGGTTCATAAACAGGAGGACAAAGAAAAGGAACCACTCAACTTCTACCGACAGCATTTAGGTGAACATAGGGAGCACACCTCTACGACTAACTTCGGCTTCTTACAGGAACTAGTACAAGACCTTTCAGAACTCGATGAACCTTTCACAAAGGATGAAAACAAAATAGCAGTCTTCCAATCTAGGTCAGACAATGCCCCAGGATCAGATGGCTTTACAGGCGCTTTCTTCAAAAAAAAATGCTGGGAGATCATATAGGGCGACCTGACACAAGCTATAAATCAGGCAACAAACCTCTCCTCACACAGCCTGTGGCTACTAAATTCTGCCTACTTTGCCCTTTTGCCTAAGTGAGCGACTTCAGATCGATAAGCCTCATCCATGCCTTCAGAAATTTTTTTCTTCAAACTCCTTGCAAACAAGTTGGCTCCAAAGCTGCAACATATGGTCTCCAAGAACCAAAGTGCCTTATTAAAGGGAAGGAACATACATGACACTTCCTTTTCATCAACAACATGGTTAAAGAGCACCACTCCTCCAAAACTCCAGTGATCCTTCTCACTTGACATAGGAAAGGCCTTCGATTCTATCAGTTGGCCATACCTCCTCAACCACTTGAGATCACATGGTTTTGGGCACAGGTGAATCGGCTAGGTAACGTCTATCCCAGTGAGTGCTTCCTCAAAGGTGCTTCTAAATGGCAGGGCAGGGAAGTGTTTCACGCATGGTCGGGGTCTCTGACAGGGTGACCCCCTCTACCCAATGTTGTTCATCCTGGCAATTGACCCATTGCAAAAGCTCTTACTCGCAGCTCAAGAAGCAAGCCTTCTTCAATCGCTCCACCATCGAGCTACTCGCTTCAACATAGCCCGGCCTATATGTATATGGCATGGTGGTGTTCACACATTCGGACTGATAGGAACTCCAAACAGTGCAGGCCATACTACAAAGCTTCGGGAGTGCTACAGGAATGGTCACCAATCTAACAAAGAGCGAAGTATATGCCATTAGGTGTGAAAACCACAATTTACAGGACATCCTGGCCCCGTTCCCAGCTCAACAAAAATCCTTCCCCTGCACTTACCTTGGACTACCTCTGCACATAAGAGAACTTCAAAAATTGGATGTTAAACCTTAATTCATAGGCTTTCCGTAAGGCTCCCGACTTGGAAAGGGAAGCTTCTAAACAAGACAGGTCGCTCCGTTTTGGTAAATCAACCCTTTCGGCCCTACCAACATACCACCTCACAGTTTTCTCTCTCAAGAAGTGGGCGAAAAAAAAGATGGACAAATTTCATCTAGGGTTTCTCTAGACAGGTTCAGAATAGGCCCAATGTGGACATTGCCTTATCAATTGGAAGAAGGTTTGCAGGCCAAAGAACCTAGGGGCCTTAGCATGATTGGACAGCGGATGATAAACCTTGCCAAGGCTACAACCTGCCTTGTGATGAAACTGACAAGCAGTCTGTCAGGGCATCAACGATAATAACCCTAGGGAATGGAGGCAAAGCCAAATTCTGGCATGATAGATGACTAAAGGGAAATCACCGAAGAAACTCTCACCATCACTTTACCAGCTGGCGACAAGGAAGAACAGGACAGTGGCATAGGAACTACAGGTACACCGCTGGTTGAGACCACTGAGGAGAATGAACTCGACTACTCAAGTTAGAGAATTCATCCTTCTATGGAATCTCATCATACAGTTTCATCTAGAGGAAGGGACATAGGATAAATTAACTTGGAGGTGGACACCAAATGGGATTTACTCGGCTAGTTCAGCATAGTGCATCCAATTCACAGGAAGCTTACAAGATGTCAGGTTCGGCTACATTTGGAAAGCAAAACTGAAAACAGGTGCAAATTTTTTAGCTGGCTAATGGTGCAAAAGAAAATCCTATCCTCGGACAAGCTTCAGTTTAGGGGCTGGGATAAAAGCCCAATTTGCTCACTCTGTGGTATAGAGCCTGAAACAAGTGTGCACCTCTTCATGGAGTGCTTTTATGCGAGACATGTATGGAACAACATCTGGCTGAAGCTAGGCCTTCAGATTCCATCACTGTCTCCCTTTAATGGTGACATGCTTGAGTGGGGGAAAGCTTCTAGGAAGCAAATGATCAAAGAACAAAGGAGGTATTTCAACGGTTTAATCATCTACACAACATGGGGAATTTGGCTCCAAAGAAATTATCAAGTCTTTAATGATGCACATGGCTCGGTGCAACAAGTGGTGAATTCCATCATCACCATGTGCAAAGCCTACGATGAAGCCTACGATGAAGCGATCAGTTGTCTTTGCAACATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030340