BGIOSGA030405

From RiceWiki
Revision as of 09:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030405| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030405, complete gene.| tag = B1008E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030405

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030405, complete gene.

LocusTag

B1008E06.22-1

Ensembl Transcript ID

BGIOSGA030405-TA

Ensembl Protein ID

BGIOSGA030405-PA

Length

5044

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4627645..4632688

Sequence Coding Region

4627645..4627780,4627881..4628200,4630722..4631156,4632044..4632688

Genome Context

<gbrowseImage1> name=IndicaChromosome09:4627645..4632688 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:4627645..4632688 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTCGGCACCGTTCCCAATAGCCAGGATCTTCCACGCCGCTATGGTGGAAGGGTCACCACCTTCGTCGTGCTCTCCTGCATCACCGCGGGCATGGGAGGCGTCATCTTCGGGTATGACATCGGCGTCTCTGGTGGTGTGACCTCGATGGACGGATTCCTGAGCAAGTTTTTCCCGGAGGTATACCGGCGGATGAAGGGGACGAGCGTCAGCAACTACTGCAAGTTCGACAGCGAGCTGCTCACCGCCTTCACGTCATCGCTCTACATCGCCGGCCTCCTCACCACCTTCCTGGCTTCGTCAGTCACCGCTAGGTGCGGCCGCCGGCCGTCGATGGTCATCGCGGGGAGCGCGATCCTCGCCGGCTCAGCGATCGGAGGAACCGCGGTGAATGTCTCCATGGTGATCTTGGGCAGGGTGCTGCTCGGCGTCGGGCTGGGCTTCGGCAATCAGGCCGTGCCGCTGTACCTGTCGGAAATGGCTCCTCCGCTGCACCGAGGAGCGTTCAGCAACGGCTTCCAGCTCTGCGTCGGCATCGGCGCCGTCACTGCCCGCCTCACCAACTTCTTCACGCAGAAGATCAGGCAAGGCTGGGGATGGCGCGTCTCGCTCGCCGTCGCCGCCGTCCCCGGCGGGTTGCTCACCCTCGGCGCGCTCTTCCTCCCGGAGACGCCCAACAGCCTACTGCAGCAAGGCAGAGACAAGCGCAGAGTCAGGGTGCTTCTCACCACGATCCGAGGTGTCAGCGACGTGGAGGACGAGCTGGAGGACATTGTGGCCGCCAATAGCGACAAGGCGAACAGCAGCCGCGGCCTGCAGATGATCGTCACCCAGCGGCAGTACCGTCCCCAGCTCGTCATGGCCATCATGATACCCTTCTTCCAACAGGTGACCGGCATCAACGCGATTTCGTTCTACGCGCCGGTGCTGCTGCGCACGATCGGAATGGGGGAGAACGCGTCGCTGCTGTCGGTGGTGGTGACGGGCTTGGTCGGCACGTCGTCGACGTTCGTCTCCATGTTCCTCGTCGACCGGTTCGGCCGGAGGACGCTCTTCCTCGTCGGCGGCGCCCAGATGCTGGTGTCACAGCTCATGATCGGAGGCATCATGGCCACCCAGCTGGGCGACCACGGGCAGGTGAGCAAGACGTGCGCGCTGGTGCTCATCTTCCTCATCGCCGTCTACGTGGCCGGGTTCGCGTGGTCGTGGGGCCCGCTCGGGTGGCTGGTGCCGAGCGAGGTGTTCCCGCTGGAGGTGAGGTCGGCCGGGCAGAGCATCACGGTGGCGGTGAACTTCCTGATGACGACGGCGGTGGCGCAGTTGTTCCTGGCCACGCTGTGCCGCATGAGGGCCGGCATCTTCTTCTTCTTCGCGGCGTGGCTGGTGGCCATGACCGCCTTCGTCTACCTCCTGCTGCCGGAGACCAAGGGCCTACCCATCGAGCAGGTCCGGAGGCTGTGGGCGCAGCACTGGTTCTGGAGGAGGTTCGTCGACACCGCCTCCAACGGGGAGCAAGCTAAGCTAGACTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAVGTVPNSQDLPRRYGGRVTTFVVLSCITAGMGGVIFGYDIGVSGGVTSMDGFLSKFFPEVYRRMKGTSVSNYCKFDSELLTAFTSSLYIAGLLTTFLASSVTARCGRRPSMVIAGSAILAGSAIGGTAVNVSMVILGRVLLGVGLGFGNQAVPLYLSEMAPPLHRGAFSNGFQLCVGIGAVTARLTNFFTQKIRQGWGWRVSLAVAAVPGGLLTLGALFLPETPNSLLQQGRDKRRVRVLLTTIRGVSDVEDELEDIVAANSDKANSSRGLQMIVTQRQYRPQLVMAIMIPFFQQVTGINAISFYAPVLLRTIGMGENASLLSVVVTGLVGTSSTFVSMFLVDRFGRRTLFLVGGAQMLVSQLMIGGIMATQLGDHGQVSKTCALVLIFLIAVYVAGFAWSWGPLGWLVPSEVFPLEVRSAGQSITVAVNFLMTTAVAQLFLATLCRMRAGIFFFFAAWLVAMTAFVYLLLPETKGLPIEQVRRLWAQHWFWRRFVDTASNGEQAKLDC</aaseq>

Gene Sequence

<dnaseqindica>1..136#237..556#3078..3512#4400..5044#ATGGCGGTCGGCACCGTTCCCAATAGCCAGGATCTTCCACGCCGCTATGGTGGAAGGGTCACCACCTTCGTCGTGCTCTCCTGCATCACCGCGGGCATGGGAGGCGTCATCTTCGGGTATGACATCGGCGTCTCTGGTGCGTGCTTACAATTACAAATCGGTCAATCGAACAAGCGCGGCAAACACCGTGATTCGAGCACGATGAACGAGGACGATGACATGGCTGGTATATGCAGGTGGTGTGACCTCGATGGACGGATTCCTGAGCAAGTTTTTCCCGGAGGTATACCGGCGGATGAAGGGGACGAGCGTCAGCAACTACTGCAAGTTCGACAGCGAGCTGCTCACCGCCTTCACGTCATCGCTCTACATCGCCGGCCTCCTCACCACCTTCCTGGCTTCGTCAGTCACCGCTAGGTGCGGCCGCCGGCCGTCGATGGTCATCGCGGGGAGCGCGATCCTCGCCGGCTCAGCGATCGGAGGAACCGCGGTGAATGTCTCCATGGTGATCTTGGGCAGGGTGCTGCTCGGCGTCGGGCTGGGCTTCGGCAATCAGGTGCACATAATATCTTAAACATTTTGTCTGGCAAATGGGCTTCAAAAACGTTTCTTGCATTTGATTTTCGGCCCTGTAGATAATAGGCTGTGCAGATTAATTAGGCTCGAACAGATGAGCACTCCAAATAATGGGCTTCCATTGAGCTGTTGGAAACAAACCATCGAGGATTAGGAATTGAGCTCACTGTTTACGAAATGGAACAAGTTTACTTTGCATCCCTTATCTCTTGCTTTGGATTGAATAGGCTCCCTCGACCATAAATCTGGGTATTAACACCTTATCCATCTTCAAAAACCCATACAAACTGATTTGGGAAGCAGTTTCTGCTGAAGTGATAGGTTGACTGTGGTTGACTTATTGAATCAACAGGTGGGATCCACGTGTCAGCAACTTCCACCCCATCTCATCTTCAATTCTTCCTCACTTCCCTCTATTTCTCTCTATGTTTCTCCTATCTTACCTCTTCCCTCGCACGCGCCGGTGGCCCCTCCGGGGACCGCACTCTGGCAACTGGCCAACCTCGCTGCCTGCTCGACGTTGCCCACGAGCTCCCCGTCCACAAACAACGGTGTCCCGCCCGCGGCCGTGGAGTTCGTCGAGGAATCCGCGGTCGGTGTACCGCCCTAGGCCCGTGGAATTCGTCGTGGAATCCGCGGTGCACGACGTCTAGTTCGTTGGCACGGTTGTGGCGAACGACGTTGGCCGTGTTGGCGATGATACCGCGCGCAGCGCTTGGGTTACGGACTTACGGGTTCATGGTGTGGTCGACGCATTGTGGTGCGACGGAGGTGGTCGCGTGACACGACGGTGTGCTGCACGTTTCGAGACGCGGTGGGACCACGGCTGCCGTGGGTGGCAGGGGCGTCCTCCTTCCCATGTGGATGGCGTGGCGTCCGGTGCGAGTCCCATCCCAAGAAGGCAAGAACCAGCCCAAGAAACCAGGGGCATAGCCTTTTCACACCTGGCCATGCAGCTAGTAACCTTAAAAAAAGTACACCGGAGGACACATCTTATCACCGAATTATAAAATCATCTTTCAACAAAAAAAAAAAAACTAGATAGAACTCATCCTCCAACCTCCAAAACCAGTACAAACAGAGCTCCCTTAGTGGTATTGTTCTTAATTTTGGCTAACATGGTTTTTACCTGGCTCCTTTGACTACGTCTTCGTCTCACATGACGCTTACATGGTATTTTCATCTGGAAAATAAAATAAAATAACACAACAAATTGGTGGGGCCCACTAGTCAGATCCGCTTCTTCCTTTTCTCTATTCTTCCTCTCTTTCTTACGTCAGGCAGGGAGGAAGGGCAGAGATGGGAGATAGCCAGCCCTCGTGCCACGTCCCGACCGTGCTGCTCGAGCTTGCTGGTATAGGCCTGGTGAGGGGGTCACGCACCGGAAGCTCCTCAATGTCGACAGGAAGCAGCTCGGCCCAAGGGAGCGGGCGAGCTCGCCGGCCTCCCCGTCTCCTCCCTCTTTGTGCGCGCTCACCGCTGGCCTCCTTGCCTCCTTCCTCTCCACGCATGCTCGCCGCCGGCGGTCACCCTTCCCCTTTCCCTCCTCCGCCTCCCCCACCTCCACGGTGATGACGGCGACTGTATTAACACGAGCACCTCCTTCCCCTCTGCCCTGAGCACTGCCATCGCCACCACCCACCGCCACTGCTAGCGACAACGAGGGATGCAACTTGCCCTTCCCTATTTCTTTCCCAAGATTCTCGATTCTTCCGCTGGTGATGCCGCCCATCCCCTCTTTGCCGCCCTACTCCTCTTTGCCGCCGCAAACATCTTCCTTGATCCACGACGTGGCCGCCATGGGCCGCCTCCTCTCCCGCCTCGCCCCGCCAGCCTCCTTTGCACCTGCCGCTTCCCCCTGCCCAGGGCCGCTGCGTTGCCTAGTGTCGGCTACTGGACCTCCTTCTTTCTGCACCGACCGACAATCCGGCCCAGACGATGACGAGAAAGGTGAGAGTGAGGAGGAAGGGAGAGAATAGGAGAAAGAGAGAGAGAGAGAGAGAGGGCGATGACGTGGTCACCTTGACATGTGGGGCTCCTGTGCTAATTCAGCCACCATGTCAGATAAAACCGGGGTCAAAATCACCTAAGAACTCAGAGTGACCCAGTTTTGTAAGTTGAGAGATTCTATATATTTGTTTTATTATTTTGTTGAGGGAAGATTTTGTAATTCGGTAACAAGACGAGGGATCTCATATATACTTCTTCCTATGATCTTTCCACATCAGATGGTTCATATAGACAGCGCATATAGCCGGTCATTGGTTTGGCTATTTCAAATATATTCGAATAATTAATGATTTAATTCGAAAGATAAACGTATACAATAATGTGGATGGTATTAATCTGTCCCGATCTGTTGATTAACAAATATAGTAACAAAATGTTCTCTCTCTCAGTGCCATATAAAATCCGACATCTTCTCCTAAATGCTTTACGTTGTACCATTGTTTTTGCCCTCCTGTCATTCGTAACGCGCACTATATTGCACGTACACACAGGCCGTGCCGCTGTACCTGTCGGAAATGGCTCCTCCGCTGCACCGAGGAGCGTTCAGCAACGGCTTCCAGCTCTGCGTCGGCATCGGCGCCGTCACTGCCCGCCTCACCAACTTCTTCACGCAGAAGATCAGGCAAGGCTGGGGATGGCGCGTCTCGCTCGCCGTCGCCGCCGTCCCCGGCGGGTTGCTCACCCTCGGCGCGCTCTTCCTCCCGGAGACGCCCAACAGCCTACTGCAGCAAGGCAGAGACAAGCGCAGAGTCAGGGTGCTTCTCACCACGATCCGAGGTGTCAGCGACGTGGAGGACGAGCTGGAGGACATTGTGGCCGCCAATAGCGACAAGGCGAACAGCAGCCGCGGCCTGCAGATGATCGTCACCCAGCGGCAGTACCGTCCCCAGCTCGTCATGGCCATCATGATACCCTTCTTCCAACAGGTCACTCCTCATCCCCTGTTTTCTTTAGATATGTGAATTTTTTTTTATTCTGGTCTCGGCATAAGGCATTCCCTCAACCATCCATTATTACAAAATTTAAACCATATGCTAGCCACAAATACTATATACTTAATTAAGCTTGAATGAAAACCACGTAAGCACAAAGCCTATCATCGACCACCCACCGATGCTTGAATATAAGCATTTTTAAAGCACCGTTTACTCCACCAACCACAACTCATTTACTACTTTTTTAATAGAGAAATTTCATGTGTATACTGAAATTTCACCTAATCCCCTTTATATCTTGAATTTTGCTATTTCTCATGTATAGCACCGAATTTTGGTTACCCTTTTTTTGTTAGTTTGACCGTTCAATTTCTATGGAAAGGATCATTTTGCCCTTAGGTAAGGAAGAAACATAAATTTTGTGAAGTATATTGTTGAAGTGTAGAAATTTATTGTACGACACTATTATATTCGTGAGTTTGTGATGCGAGACATTATTTATGACAAACCTTATATATAAATATGAAATAAAAAGTATTATTTACTTTTTAGTTATTAAAAATTATATATGTGGCATATTTTTGTGATAGTAGTACAACCGATTTACCATCTGTCCTATATATTGTCTACTTAAAATCTATATATTATCTACTTAAAACAGTGTTGTAGAAGATTAATTGGTTTTTCCAATTTTAAAAAATACTACTCATACTTTTTGTTGATGATATACAAAGCTTATATAGGTGGGAAGAGAGGAAAGGTGGACGACCGCATCTTTAAAATTATAGAGAAACCTAAAAATTGTAGACGATATATATATGGAGTTTTAATTACTAGTACGTACCAGCTAATTGGCGTGCATGAACGAAAATGTATAGGTGACCGGCATCAACGCGATTTCGTTCTACGCGCCGGTGCTGCTGCGCACGATCGGAATGGGGGAGAACGCGTCGCTGCTGTCGGTGGTGGTGACGGGCTTGGTCGGCACGTCGTCGACGTTCGTCTCCATGTTCCTCGTCGACCGGTTCGGCCGGAGGACGCTCTTCCTCGTCGGCGGCGCCCAGATGCTGGTGTCACAGCTCATGATCGGAGGCATCATGGCCACCCAGCTGGGCGACCACGGGCAGGTGAGCAAGACGTGCGCGCTGGTGCTCATCTTCCTCATCGCCGTCTACGTGGCCGGGTTCGCGTGGTCGTGGGGCCCGCTCGGGTGGCTGGTGCCGAGCGAGGTGTTCCCGCTGGAGGTGAGGTCGGCCGGGCAGAGCATCACGGTGGCGGTGAACTTCCTGATGACGACGGCGGTGGCGCAGTTGTTCCTGGCCACGCTGTGCCGCATGAGGGCCGGCATCTTCTTCTTCTTCGCGGCGTGGCTGGTGGCCATGACCGCCTTCGTCTACCTCCTGCTGCCGGAGACCAAGGGCCTACCCATCGAGCAGGTCCGGAGGCTGTGGGCGCAGCACTGGTTCTGGAGGAGGTTCGTCGACACCGCCTCCAACGGGGAGCAAGCTAAGCTAGACTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030405