BGIOSGA030421

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Revision as of 09:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030421| Description = BGIOSGA030421| Definition = Oryza sativa Indica Group BGIOSGA030421, complete gene.| tag = | tid = BGIOSGA030421-TA|...")
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Gene Name

BGIOSGA030421

Description

BGIOSGA030421

Definition

Oryza sativa Indica Group BGIOSGA030421, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA030421-TA

Ensembl Protein ID

BGIOSGA030421-PA

Length

1695

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:5336252..5337946

Sequence Coding Region

5336252..5337946

Genome Context

<gbrowseImage1> name=IndicaChromosome09:5336252..5337946 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:5336252..5337946 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAACACGCGCACTGGCACTGGAAGTGGAAGTGGAAGTGGAGCCAATAACAATGAGGGAGAACCCACGCTAGCTCAGATTTTGGCCCAACAAACACAATTGATTAATCTGTTAGTGCAGCAGGCACAGAATCAGCAGGGAAACAATCAGAACCAGAATCCACCCCCTCCTCCCCAAAATAAGTTGGCAGATTTCTTACGAGTGAGACCCCCTACCTTTTCAAGCACCACCAATCCAGTAGAAGCAGGAGATTGGCTGCATGCGGTGGAGAAGAAGTTGGATTTGATCCAGTGTACTAAGCAGGAGAAGGTTTCTTTTGCTTCGCATCAGTTGCATGGACCTGCTGCTGAATGGTGGGATCATTTTCGCCAAGGCAGGGCTGGAGGAGAACCTATCACTTGGCAGGAATTCACAGCTGCTTTTAAGAAGACGCACATACCAACGGGTGTTGTAGCTCTAAAGAAGAGAGAGTTTAGAGCACTCAACCAGGGATCTCGTTCGGTTACTGAGTATCTCCATGATTTTAACCGTTTAGCACGCTATGCTCCAGAAGATGTTCGCACTGATGAAGAACGTCAGGAGAAATTTTTGGAAGGACTAAATGATGAGTTGTCCTATACTTTGATGTCTACGGAATTCCGGGATTTCCAGCAGTTGGTGGACAAGGCAATTCGTCAGGAAGACAAGTATAACCGCATGGAGCAGAAGAAACGCAGGGCTGCCCAATTCAAGGCACAACAGGGCAGTAACCAGAGGCCGCGTCTCGTTACTGGACCTCAAGCTCCATCGTACCCGCAAGGAGGATCTTCATCAGTTGTCCGTCCTCAACGCCAGTTCTACAACAACAATACTGGTAATCGTGGCAATGATAACCGCAACGTGGTTGTTCGTCCTGCAGTAACTCCAGTTCAGAACCAGCCCGTTAGGAAGGAACAGGGAAGCAAGCCGGTGATATGCTTCAATTGCGGTGATCCAGGACATTATGCTGATAAGTGTCCGAAGCCTCGGCGTGTGAAGAACGCTTCAGTCCCGAATAACTCCAATATTCCAGCACCAAAGGCACGTGTTAATCATGTTGCAGCAGCAGAAGCTCAGAATGCACCAGACGTTGTTTTGGGTACGTTTCCTGTTAACTCTATACCCGCAACTGTGCTTTTTGATTCCGGTGCTACACATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCTAAGCCCATGACACGACTGCTTCAGAAAGATGTGAAGTACAAGTGGTCAGAAGAATGTGAGCAGAGTTTTCAAGAGTTGAAGAATCGCTTAATATCAGCTCCCATTTTGATTTTACCTGATCCAAAGAAGGGTTTCCAAGTGTATTGCGATGCATCCAAACTTGGGTTAGGTTGTGTTCTGATGCAAGATGGGAAGGTGGTTGCCTATGCATCTCGTCAGTTACGCCCGCATGAGAAGAACTACCCTACTCATGATCTTGAGTTAGCTGCAGTGGTTCATGCGTTGAAGATTTGGCGTCATTATCTTTTCGGTACTCGTACAGAGGTGTACACCGATCACAAGAGTTTAAAGTATATCTTTACTCAGCCGGACCTGAACATAAGACAAAGGAGATGGTTGGAATTAATTAAGGATTATGACATGGGAATTCATTATCACCCGGGTAGGCTAATGTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MVNTRTGTGSGSGSGANNNEGEPTLAQILAQQTQLINLLVQQAQNQQGNNQNQNPPPPPQNKLADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTKQEKVSFASHQLHGPAAEWWDHFRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRMEQKKRRAAQFKAQQGSNQRPRLVTGPQAPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNVVVRPAVTPVQNQPVRKEQGSKPVICFNCGDPGHYADKCPKPRRVKNASVPNNSNIPAPKARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSXXXXXXXXXXXXXXXXXAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNIRQRRWLELIKDYDMGIHYHPGRLML</aaseq>

Gene Sequence

<dnaseqindica>1..1695#ATGGTGAACACGCGCACTGGCACTGGAAGTGGAAGTGGAAGTGGAGCCAATAACAATGAGGGAGAACCCACGCTAGCTCAGATTTTGGCCCAACAAACACAATTGATTAATCTGTTAGTGCAGCAGGCACAGAATCAGCAGGGAAACAATCAGAACCAGAATCCACCCCCTCCTCCCCAAAATAAGTTGGCAGATTTCTTACGAGTGAGACCCCCTACCTTTTCAAGCACCACCAATCCAGTAGAAGCAGGAGATTGGCTGCATGCGGTGGAGAAGAAGTTGGATTTGATCCAGTGTACTAAGCAGGAGAAGGTTTCTTTTGCTTCGCATCAGTTGCATGGACCTGCTGCTGAATGGTGGGATCATTTTCGCCAAGGCAGGGCTGGAGGAGAACCTATCACTTGGCAGGAATTCACAGCTGCTTTTAAGAAGACGCACATACCAACGGGTGTTGTAGCTCTAAAGAAGAGAGAGTTTAGAGCACTCAACCAGGGATCTCGTTCGGTTACTGAGTATCTCCATGATTTTAACCGTTTAGCACGCTATGCTCCAGAAGATGTTCGCACTGATGAAGAACGTCAGGAGAAATTTTTGGAAGGACTAAATGATGAGTTGTCCTATACTTTGATGTCTACGGAATTCCGGGATTTCCAGCAGTTGGTGGACAAGGCAATTCGTCAGGAAGACAAGTATAACCGCATGGAGCAGAAGAAACGCAGGGCTGCCCAATTCAAGGCACAACAGGGCAGTAACCAGAGGCCGCGTCTCGTTACTGGACCTCAAGCTCCATCGTACCCGCAAGGAGGATCTTCATCAGTTGTCCGTCCTCAACGCCAGTTCTACAACAACAATACTGGTAATCGTGGCAATGATAACCGCAACGTGGTTGTTCGTCCTGCAGTAACTCCAGTTCAGAACCAGCCCGTTAGGAAGGAACAGGGAAGCAAGCCGGTGATATGCTTCAATTGCGGTGATCCAGGACATTATGCTGATAAGTGTCCGAAGCCTCGGCGTGTGAAGAACGCTTCAGTCCCGAATAACTCCAATATTCCAGCACCAAAGGCACGTGTTAATCATGTTGCAGCAGCAGAAGCTCAGAATGCACCAGACGTTGTTTTGGGTACGTTTCCTGTTAACTCTATACCCGCAACTGTGCTTTTTGATTCCGGTGCTACACATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCTAAGCCCATGACACGACTGCTTCAGAAAGATGTGAAGTACAAGTGGTCAGAAGAATGTGAGCAGAGTTTTCAAGAGTTGAAGAATCGCTTAATATCAGCTCCCATTTTGATTTTACCTGATCCAAAGAAGGGTTTCCAAGTGTATTGCGATGCATCCAAACTTGGGTTAGGTTGTGTTCTGATGCAAGATGGGAAGGTGGTTGCCTATGCATCTCGTCAGTTACGCCCGCATGAGAAGAACTACCCTACTCATGATCTTGAGTTAGCTGCAGTGGTTCATGCGTTGAAGATTTGGCGTCATTATCTTTTCGGTACTCGTACAGAGGTGTACACCGATCACAAGAGTTTAAAGTATATCTTTACTCAGCCGGACCTGAACATAAGACAAAGGAGATGGTTGGAATTAATTAAGGATTATGACATGGGAATTCATTATCACCCGGGTAGGCTAATGTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030421