BGIOSGA030461

From RiceWiki
Revision as of 09:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030461| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030461, complete gene.| tag = OsI_307...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030461

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030461, complete gene.

LocusTag

OsI_30760

Ensembl Transcript ID

BGIOSGA030461-TA

Ensembl Protein ID

BGIOSGA030461-PA

Length

3434

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6527375..6530808

Sequence Coding Region

6527375..6527387,6527473..6527546,6527953..6528188,6528285..6528466,6529061..6529361
,6529461..6529659,6529902..6529986,6530063..6530104,6530186..6530234
,6530382..6530451,6530737..6530808

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6527375..6530808 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6527375..6530808 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTCTGGGGTGTGGAGGTGAAGGCTGGGAAGCCCTACACCCACCGCCATGATCCCTCACATGGCCGCCTCCGCATTTGCCAGGCTACACTTGGAAGTTGCGATTCGGCTACCAGGACGATAGTACAATGTAATGTTGGTAGCAAGACGCCCATCATACTCTGTAGTCTGAATCCTAAATTGGCTGAGATGTGCCATCTAGAGGTTGAGTTGGAGGAGGACGATGAGGTTGTGTTTTCAGTACTTGGTCAGAGCTCCATTCATCTCTCAGGATATTACATTCGTTCAAGTGGCAGATCTAATGCAGGAGATGACGAATCAGAATCTTATGGGGAGGATGTTGGAGAGTCTGATACTGATGAGGAGTTTAACGCGAGTGACGACAGCTATGAATCTGACTTTATTGATGATGGTGATGTTGAAGTATCTGAGGATAAGTCCAGATCTGACTCTGTTGATGATGGTGATGCATGTTCCACCCCTGATCATCACAAAAAAAAGGATAAAGTTCAAAAGAGGCGTCGCTTGAAGAAGAAACACCCAGCTGATAGCAGTGATGATAACAATGATGATTCTTCCCACAGGCCTGTTGTCAGGCGTAAGGCTTATTCAATGTTTGATAGTTGCAGTGAAGATGAAGATAACATGTCTGTTCCTGTTTCTTTGGCTAAGAAAGAAAACACTAAAGATGTTGACGAAACAAAATACCCAAATGGTGAGTTAAATGATGACACCACGAAAAAGAGTAATGGTGCCAAGAAAAGAAAAGGTGATGCCATCAGTCAGGATCATGCACCTTTGATGGATCTAACAAATGCAGATGAACCATTGGTTTCAAAAGAAGGCAGAACAAAAAAGAAATCAAAGAAAAAGGGAGGAAAACAGTTAGAGGTAGGAGATGGAAAACATTCCAACAAGATAAGAACATTAGAAGATGGGTTGATAGTAGAAGATCTGTCAACAGGAAACCTAGATGCAGAAATGGCTTCTAATGGCAGCAAGGTTTCTATCAAATATGTTGGCACACTACAGGATGGGAAGATTGTTGAGTCTAATGTTGGTGAAAAGCCCTACAAATTCAAGCTTGGTGCTGGGAAAGTAATTCGAGGATGGGATGTCGGTATTTGTGGCATGCGTGTTGGGGACAAAAGAAAGCTCACCGTCCCACCAGCTATGTGTTATGGCAGTAAAGCAATAGGAGAAGTACCCAAAAATTCATCAATCATCTACGAAATCGAGTTAGTGAAGGCGATGAAACATTTTGTACGACTAAGTCCTTCAGTCTCTACAGGTCTGGGGACTTCTATGACACTTTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAFWGVEVKAGKPYTHRHDPSHGRLRICQATLGSCDSATRTIVQCNVGSKTPIILCSLNPKLAEMCHLEVELEEDDEVVFSVLGQSSIHLSGYYIRSSGRSNAGDDESESYGEDVGESDTDEEFNASDDSYESDFIDDGDVEVSEDKSRSDSVDDGDACSTPDHHKKKDKVQKRRRLKKKHPADSSDDNNDDSSHRPVVRRKAYSMFDSCSEDEDNMSVPVSLAKKENTKDVDETKYPNGELNDDTTKKSNGAKKRKGDAISQDHAPLMDLTNADEPLVSKEGRTKKKSKKKGGKQLEVGDGKHSNKIRTLEDGLIVEDLSTGNLDAEMASNGSKVSIKYVGTLQDGKIVESNVGEKPYKFKLGAGKVIRGWDVGICGMRVGDKRKLTVPPAMCYGSKAIGEVPKNSSIIYEIELVKAMKHFVRLSPSVSTGLGTSMTLC</aaseq>

Gene Sequence

<dnaseqindica>1..13#99..172#579..814#911..1092#1687..1987#2087..2285#2528..2612#2689..2730#2812..2860#3008..3077#3363..3434#ATGGCGTTCTGGGGTAAGCCTCCCCCGGATTCTTGCCTCCTAATGCTCGTCGTCGTTGTCGGCGTTCTTCCTAATAGCGCGTGGGTTTGTCTGTGCAGGTGTGGAGGTGAAGGCTGGGAAGCCCTACACCCACCGCCATGATCCCTCACATGGCCGCCTCCGCATTTGCCAGGTTCGTCGGGGCCTTCTCTTCTTCGTATGATCGCTGTAATGGTTCTTGAATGCTTCTGGAATGGTTCTTGAAATCAATATTCGTGAGATATAATGTTTGTCATAATTAATTTCTGTTTTAAGGGTTTTAGTATGAGCCAGTAAATCTGTATTAATGAAAACTTGAACTTCCAAATGCCATTGGAGCAATTACTTGGAATCTTGGATACTGAAGAAGTACAATACTTGATGTATTGACAGCCCTATTAGTGGCTCATTTTTCATTGCTCATTTGATTATCTGTATAGCTGTTGTTGCTCTAACTGATTATAGTTACTGAACTGGTTGAATGTTTGACTCGAGGCATCATAACCTTTTTTTTACATCTGTTTAGGAATATGCCACATTAATCCTTGTATGTTTTTCAGGCTACACTTGGAAGTTGCGATTCGGCTACCAGGACGATAGTACAATGTAATGTTGGTAGCAAGACGCCCATCATACTCTGTAGTCTGAATCCTAAATTGGCTGAGATGTGCCATCTAGAGGTTGAGTTGGAGGAGGACGATGAGGTTGTGTTTTCAGTACTTGGTCAGAGCTCCATTCATCTCTCAGGATATTACATTCGTTCAAGTGGCAGATCTAATGCAGGAGATGACGAATCGTATCCTTGTTGATACTTGATAGCCTCATCTCATTCTTTCACCTTTTTTTTCTTTGTCACGTTTCAAACTTAGTGTTCATTCTTAACATTGGTTAGAGAATCTTATGGGGAGGATGTTGGAGAGTCTGATACTGATGAGGAGTTTAACGCGAGTGACGACAGCTATGAATCTGACTTTATTGATGATGGTGATGTTGAAGTATCTGAGGATAAGTCCAGATCTGACTCTGTTGATGATGGTGATGCATGTTCCACCCCTGATCATCACAAAAAAAAGGGTATGTGATTGATTTGTGTGAAGCTGAATTCCTCAGCATATTATCACGTATTGATACCTGCTTTAGCATTCTTTCAACATTAGAGCTAGGAAATTTCTGATTAAACATAACAGTGTTCATGAAATCGCGCACTTATCTTTTTCATAGTATCTTTTTAGTTAAAAAGCTAAGAATAAAAATGACTTGGCTTATGAGTAAATTATCTTGCTATTGTATTTTGTCTCTCAAGAGAAGAATTGGGACTGCATTTCTTTTAGGCCCATAGAGATGCTGTACCTTTTCTCAAGGTTTAGCATGGCAACATGTTTTAATATTTTCATCTTCTCTGATCCTGCATGGCTATAATCTAGGAACACTAAGTGAACGTGTTTTTTTCTCCTCTTTTTTTTTGTAAAGTTAAAACGATAGCATGCCTTTGCCATCCTACCTAGGTTATTGCTGTCCTTTTTGTTTCTATTTTTGTTTTATGCTTATGTTCCTTGTAATTTGTATTCACCTACATCTATTGTTTACTGGCAATATGTCTAGTCTACAGATTACGCTGATAATGATGTCCCACTAAATTTTGCTGAATTTCTATTTTGATGCCAACAGATAAAGTTCAAAAGAGGCGTCGCTTGAAGAAGAAACACCCAGCTGATAGCAGTGATGATAACAATGATGATTCTTCCCACAGGCCTGTTGTCAGGCGTAAGGCTTATTCAATGTTTGATAGTTGCAGTGAAGATGAAGATAACATGTCTGTTCCTGTTTCTTTGGCTAAGAAAGAAAACACTAAAGATGTTGACGAAACAAAATACCCAAATGGTGAGTTAAATGATGACACCACGAAAAAGAGTAATGGTGCCAAGAAAAGAAAAGGTGATGCCATCAGTCAGGATCATGCACCTTTGATGTAAGTGTTGAGTCTAATGTTGCTCCATGTGTAGCTCAATCCTCTTATATGTTTCTGTTGTGGTTCCTGATACATAATTTCTTACAATGTCGTGAGCAGGGATCTAACAAATGCAGATGAACCATTGGTTTCAAAAGAAGGCAGAACAAAAAAGAAATCAAAGAAAAAGGGAGGAAAACAGTTAGAGGTAGGAGATGGAAAACATTCCAACAAGATAAGAACATTAGAAGATGGGTTGATAGTAGAAGATCTGTCAACAGGAAACCTAGATGCAGAAATGGCTTCTAATGGCAGCAAGGTAACCCCTGAGTTTCATCCCTGAACTGCATTTGATATTTTTGTATCTGTAGATTTTGCATCTATGCACCTGGCAATGTTCCCTTTCCTTATGATCATCTTGCAATCAGTACTCAGAATTACTGATAGTATTCATGGCAGTCTTTTGATTATACATGCTCTGCAGTCAGTGCATTAAGATTTCATGTACCAAGTTGTTTGTCCAAAAGATAAGGTGTAAGCAGCTCAGGTTTACTTGTGCAGGTTTCTATCAAATATGTTGGCACACTACAGGATGGGAAGATTGTTGAGTCTAATGTTGGTGAAAAGCCCTACAAATTCAAGCTTGGTAAATCACATTCACTTCTGCATTATTTTGAATTCTTAATATTGATACTAACAAATGTGTACCATCCTAACTCAAGGTGCTGGGAAAGTAATTCGAGGATGGGATGTCGGTATTTGTGGTAATAATTGTGGCGCTATTTATGTTTCATTGTCAATTTGGAGTATCTTTTATAATTAATTAGTATGATATTGACTTGTAGGCATGCGTGTTGGGGACAAAAGAAAGCTCACCGTCCCACCAGCTATGTGGTATGAATCGAATTGTTCGGTTTGCGGCTTTCAGTTCTATGTGCAAAATGTTATATGAAAGTTCTGTTTACACGTCTGTTTGCCATAATGCGTAAGGATCACCACTTATTTATTTTTTGACTGAATGGATCACCATTTATTCTGCAGTTATGGCAGTAAAGCAATAGGAGAAGTACCCAAAAATTCATCAATCATCTACGAAATCGAGTTAGTGAAGGTCAGATCCAAAAGCACATCATGAGCTTCTGCATACTCATGTCCTATGCCGAAGGCTGCGACACGGGCTCATGCATCTCTATGTAGCTACATGCCATGCTGGAATTTTGTTTCTCCCAGGTGATGGCATGCCCTGTCTTCTGCTTTTGTTCTAGAAGGAATTATTTTGTACTACCCTACAGATTGTAATCTGTGGTCAGACTACAACTCCAGCTGTCATCTGAGATCGCCTTCAGCAGAAGATTTTGTTTGACTTTCTAGCTAAAAATGTTCATATCTGTTGAAGGCGATGAAACATTTTGTACGACTAAGTCCTTCAGTCTCTACAGGTCTGGGGACTTCTATGACACTTTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030461