BGIOSGA030478

From RiceWiki
Revision as of 09:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030478| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030478, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030478

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030478, complete gene.

LocusTag

OSJNBA0024K20.16

Ensembl Transcript ID

BGIOSGA030478-TA

Ensembl Protein ID

BGIOSGA030478-PA

Length

3482

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7027337..7030818

Sequence Coding Region

7027337..7027376,7029371..7030818

Genome Context

<gbrowseImage1> name=IndicaChromosome09:7027337..7030818 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:7027337..7030818 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAGCCCCCAGGAGACAACCGATATGGAGCTTGCAGCAGAAGGCCAAGCAGAAATTTGCATTGAAACTCTGCTCACCAACTTGACGGCCTGCTGGGAGAGAAGCAGGACAGGGAGCAACCGACCCGAGTGTAAGATTCCGTTATTATGCCCTCCGCAGAGGCCGGCTGCGGTGTGCATCGGCCCCAACCACCACAATCCCTTCTACCACCTGATGGAGCAGGAGAAGAAGGTGATGCTCTACGGCATTCTGATCCTGGTGGACGAGCAGCACAAGGCTGCCGTGCTGAGGAGATTAGTGGATGCGGTCACTGCCCTCGAAAGCGTTGCGAAGGAGCATTATTACATGGAGCAGGTGCCTTGCGATGCCATGAGACGTACTGCGGGTTTCGTGCAGATGCTGCTCCTCGACGGATGCTACATCCTTGGCAAGTTCGTGCTCCATGACCTCTTACTCGTCAGGGCCAACGGTGCGGGGACGAGCCAGCAGCAGCAACATGGTACTGGAAGCGCGATGCAGAACATGGAATTGGTGCGCGACGTGTTCTACCGCCTGGATAACCAGATACCCTTCTGTGTCCTCCGCGCCATCTACGGGGTGCTCCGTGAATGTAGAACCACGCCGGGGGTGATGGCGAGGGAGCTCGATGAGACGTTGGCCGTCCAAGTCCAGGCACTTCTCAAACATTTCGGATACTCCATTAGGAACCAAGTGCCCCGCGAGATCTGGCACCTGCATCACATGCTGCACAAGCACTTCGTCCCACAGGACGATCCTATTCCTACCGGCGATGCTGTTCGGCTGCCGGTCGACGTCGTCGACACCGGCCGGAGATCAGCTACGGCAGCCGCCCCCACCTTGTACCGGTGGCGCGCAGCGACGTTCTACCATGCCACCGGCGTGATCTTCATGAAACGCCACCTCCGCCACGGCGCCAGCAGCGGCGCGTGGCGCTGGTTCGTCGACGGCGGCGGCGCCCGCTCCGTTCTGGACGTGAAGTTCCATCCGCTGACGCTGCGGCTGAGCATCCCGCCGCTCATGGTGGACATGAACACGTCCACGGTCCTCCGGAACCTGATGATGCTGGAGCAGCACAACCCGAGCCTGGGGAGCCAGGTCACGGCCTACTGCTACTTCCTGTCGCAGCTTGCCGGCACGGCGAGCGACGTCGCGCTCCTCGCCAAGAAGGGGATCATCGTGAGCCTCCTGGCCAGCGACGGCGACGTCGCCAGGATGCTCGGCGAGCTCTGCGTCGGCATCACCATCAACCCGGCCGACGAGCGCAGCCACAACTACCTGCTCGACACGAGGAAGGGCCTCGAACGTATGTACAAGACCCGCGTGATTAGGTGGATAGCGCAGCTCTACCACCGACACTTGAGCAATCCGTTCGTGCTGATGGTGCTGGTGGCTGCCATGGTTGGATTTGTCTGTGAACTTATACAGGCAATCTATGCAGTCAAGTCCTTCAAGCGCCAACCATAA</cdnaseq>

Protein Sequence

<aaseq>MDSPQETTDMELAAEGQAEICIETLLTNLTACWERSRTGSNRPECKIPLLCPPQRPAAVCIGPNHHNPFYHLMEQEKKVMLYGILILVDEQHKAAVLRRLVDAVTALESVAKEHYYMEQVPCDAMRRTAGFVQMLLLDGCYILGKFVLHDLLLVRANGAGTSQQQQHGTGSAMQNMELVRDVFYRLDNQIPFCVLRAIYGVLRECRTTPGVMARELDETLAVQVQALLKHFGYSIRNQVPREIWHLHHMLHKHFVPQDDPIPTGDAVRLPVDVVDTGRRSATAAAPTLYRWRAATFYHATGVIFMKRHLRHGASSGAWRWFVDGGGARSVLDVKFHPLTLRLSIPPLMVDMNTSTVLRNLMMLEQHNPSLGSQVTAYCYFLSQLAGTASDVALLAKKGIIVSLLASDGDVARMLGELCVGITINPADERSHNYLLDTRKGLERMYKTRVIRWIAQLYHRHLSNPFVLMVLVAAMVGFVCELIQAIYAVKSFKRQP</aaseq>

Gene Sequence

<dnaseqindica>1..40#2035..3482#ATGGATAGCCCCCAGGAGACAACCGATATGGAGCTTGCAGGTAAGTAATTAAGCACGTACGTACGATGTAATCTATGTATACGTCCGTCACATTTACGGCTTGTTTCTGCAGTGCATATATATCTATGTAATTAATGGTCACTGGGATCCGGAAAACGTAATTTGCTAAGAGAAATGTCGACTGGGAAGCATATATTAATTAATTTAATTTTACTGTAACAGTTTCAGAATAGTTATTACGGCTTGTTTCTTCAGTGCATTTGTATCTATGTAATTAATTAATGGTCACTGGGGTCATATTAATTTTACTGTGCAACAGTTTCAGAATAGTTTTTAACATAAACATGATTCTGTTGTGTTCTCTATAAATTATCAGTCGCCTGAAACTCTGACGTATCCGGCCCCAAAACCTAGATCTACGCTCCGGCCGTCCAATATATAGCCAATATATAGCATGCTACAAGACGCATATAATTTCAATTTAGAAGAGCACTGTTGTAATCTATTCTCAAATGTCCTCTATTTTTTTCTGTATTTCATGGGTCTTTCTTCCTTCTATTCTTCATAATGCTTAAAGTTTTATTATGTCCATGCAACATTTCTGAGCCATTAATTACTTACTTTAAATTTTAAAATTTGATTCAGGGTAAAGCTAAAAGTTAAAAAATCAGACTAAGCCAACGGATTAGGATATATATAGGATAGACTTGTTTCTTACTCGGTACGGTAGGAAAACCATTCTGTTAATATGATATGGGCTACAATTATCATTCATAAACGCTAAAAGACAATTAATTTCTAGTAATCAATCAGGCGATTTTTTTAATTGTTTCCATATTGCACTTGATGATCCAATATGAACCAAATAGTGAGCGTGAAATCTACTATCTCAATCCCAGAATATAAGAATTTTTAAAGTTAGATACAGTTATTAAGAAAGTAGGAATATTTAATAGAGGAAGGTTGACATTTGTTGAAAACTGGAGATAGGTAGGGATATTGAATGTTGGAAGGTGCGATTAGTTAGGAAGAGAATGCTGATGGAAAAATTGTTTCGTTTTAAGATAAATTGTAAAGTGTACAATTTGTTATATTTTTGGACGGATGGAGTACATTTTTTCGGATAATGTCAAGTTATAGTTGTTCAATTAAAAACAGTATTAACGTGTTTAATTATATAGTTATATACATTTAAATATGTATCAAGGCCCCCCTCAGTCGTATAGAAAGAACAACCTAATATAGCTGTCACAGATTTGCAGTAGATTGCAATTTGCAAGTGACAATTTTGCTAAATTGTTTGGCGATGCTGAATTTAGTGTGAACAATATATCTGTACTTTTATTTCCTCAGCTTGCTTTGTGGTCTTTTAATTAATTCAATAATTGCACCGCTGGCATATGAACTTGCGAGGTGGGTGCGATTTAGTACGTAAACAAGTAAATCACTTATTTTGATGCATAAACCTGTCTAGTGTGTACAATCCAAACCCAAAATAATACATCATAACTAATTTCACTAAGTTGAATACTGATTAGGATTGTTATATAGGCTTTCATGTCAAGATGAGGTTACCTAAATACACATATGTTCAATCAAATATATAAAAGTCATGTTAATTATACATATTAAAGGTGAATATATACAAAATAATAGAAGAAATAATTGTTACCCATTTACAAACACGACATTTGTCATGCCCTTGATCGTTTGTGCACGAAATTATATATCAGACTAACTCAACATGATTAGTCACAAATATATCGATTTGAACTATTTCGCACTACATACTAGACAAGTTTGCACATTATAATAAGCAATTTACAAGTTTATGTACTAAAATACATTCACTTCATAAGTTTGTATACCGGCGACACAATTTAATTACTCTCTAATTAATTTCTTCCTGCCGCGTATGAACAGTGTTTTTTTTAGCTATGCTTCATCGTCATCATGCAAACCTAAGTCTGCTAGTACGGCAGATATCCCTTAGTTTTTTGAATGCTTGCAACACTGACTGTAAACATTATTCAGCAGAAGGCCAAGCAGAAATTTGCATTGAAACTCTGCTCACCAACTTGACGGCCTGCTGGGAGAGAAGCAGGACAGGGAGCAACCGACCCGAGTGTAAGATTCCGTTATTATGCCCTCCGCAGAGGCCGGCTGCGGTGTGCATCGGCCCCAACCACCACAATCCCTTCTACCACCTGATGGAGCAGGAGAAGAAGGTGATGCTCTACGGCATTCTGATCCTGGTGGACGAGCAGCACAAGGCTGCCGTGCTGAGGAGATTAGTGGATGCGGTCACTGCCCTCGAAAGCGTTGCGAAGGAGCATTATTACATGGAGCAGGTGCCTTGCGATGCCATGAGACGTACTGCGGGTTTCGTGCAGATGCTGCTCCTCGACGGATGCTACATCCTTGGCAAGTTCGTGCTCCATGACCTCTTACTCGTCAGGGCCAACGGTGCGGGGACGAGCCAGCAGCAGCAACATGGTACTGGAAGCGCGATGCAGAACATGGAATTGGTGCGCGACGTGTTCTACCGCCTGGATAACCAGATACCCTTCTGTGTCCTCCGCGCCATCTACGGGGTGCTCCGTGAATGTAGAACCACGCCGGGGGTGATGGCGAGGGAGCTCGATGAGACGTTGGCCGTCCAAGTCCAGGCACTTCTCAAACATTTCGGATACTCCATTAGGAACCAAGTGCCCCGCGAGATCTGGCACCTGCATCACATGCTGCACAAGCACTTCGTCCCACAGGACGATCCTATTCCTACCGGCGATGCTGTTCGGCTGCCGGTCGACGTCGTCGACACCGGCCGGAGATCAGCTACGGCAGCCGCCCCCACCTTGTACCGGTGGCGCGCAGCGACGTTCTACCATGCCACCGGCGTGATCTTCATGAAACGCCACCTCCGCCACGGCGCCAGCAGCGGCGCGTGGCGCTGGTTCGTCGACGGCGGCGGCGCCCGCTCCGTTCTGGACGTGAAGTTCCATCCGCTGACGCTGCGGCTGAGCATCCCGCCGCTCATGGTGGACATGAACACGTCCACGGTCCTCCGGAACCTGATGATGCTGGAGCAGCACAACCCGAGCCTGGGGAGCCAGGTCACGGCCTACTGCTACTTCCTGTCGCAGCTTGCCGGCACGGCGAGCGACGTCGCGCTCCTCGCCAAGAAGGGGATCATCGTGAGCCTCCTGGCCAGCGACGGCGACGTCGCCAGGATGCTCGGCGAGCTCTGCGTCGGCATCACCATCAACCCGGCCGACGAGCGCAGCCACAACTACCTGCTCGACACGAGGAAGGGCCTCGAACGTATGTACAAGACCCGCGTGATTAGGTGGATAGCGCAGCTCTACCACCGACACTTGAGCAATCCGTTCGTGCTGATGGTGCTGGTGGCTGCCATGGTTGGATTTGTCTGTGAACTTATACAGGCAATCTATGCAGTCAAGTCCTTCAAGCGCCAACCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030478