BGIOSGA030498

From RiceWiki
Revision as of 09:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030498| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030498, complete gene.| tag = OsI_308...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030498

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030498, complete gene.

LocusTag

OsI_30849

Ensembl Transcript ID

BGIOSGA030498-TA

Ensembl Protein ID

BGIOSGA030498-PA

Length

7152

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7656923..7664074

Sequence Coding Region

7656923..7657637,7657734..7658302,7659755..7660221,7660567..7660948,7663475..7664074

Genome Context

<gbrowseImage1> name=IndicaChromosome09:7656923..7664074 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:7656923..7664074 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATCGGTACAGCTGCAACTAGTAATAACTTAGGAGAATCAAGTATCGACAAGTGTGTCCCGGAAGCAAAGGTAATCAGTGATACCGCCGGATTAGAAGAATCCAAAGATAATGTTGGCAGCAGTACTTCTTCACCAGCAATAGACCCAGAATGCCTGAAAGCAGCGATATCTGGTGATGCAACATCAATGCATGACATGGCTTCACAGGATCCAAACGTGCTGCTTGGAACAACCGCGGCCGGCAACACCTGCCTCCACATATCCTGCACCCAGGGTCACGAGGAGTTCTGCAAGACTGTAGTGGTGTTGAAGCCGTCTCTCCTCGCTGCCGTCAACGCACACAATGAAACACCCCTCATCACAGCTGCCAAACATGGAAGCCGTGCTTCCTTATCATTAGCTTCTCTTTTGCTGAAGTTTTGCCAATGTCACCAGCTGAGCGAGGCAATCACACAGAAAGACAAGAAAGGATGCAACGCGCTGCACCACGCCATCCGCAGCGGCGACAGCAAGCTCGCGCTGGAGCTCATAAAGGCGGAGCCAGCATTGTCGCGAGTTCCCAACAACGACCAAGAGTCACCCATGTTCATTGCAGCGGTGAGGAATCTTACAGATGTCGTCGGGAGACTGTTGGAGATTTCTGATGCTGCTCATGGGGGATCTGGTAAGCAAAATGCTCTGCATGCCGCCGTGAGAAATGGCAATCCAGATATTGCTAAAAGGATTATGGAGGTACATCCTTGGATGGCCAGAGAAGAGATTGGTGATGACAAGCCTGCAGCTACTCCAATGTGGCGAGCAGTAAATGATGGCAAGATCGATGTCGTAACAGTACTGTTGAAATATGATCCGTCTCTAGGGTATCTAATGAACAGAGAAGGCAGTAGTCTTCTTTGTACCGCCGGACGTAACGGCCATGTTGCTGTTGCTCGAGAGCTTCTTAAGCATTGTCCAGATACTCCATACTGCAGCGAAACAGGCTGGACGTGTCTTCACGCAGCTGCATACACTGATCGCATAGAGTTTGTTCGGTTTGTTCTGGGGTCAGAACAACTACGGCATCTCGTTAACATCCAAGATAAATACGGACGAACTGCTCTGCATCTTGCAGCAGAGAAGCTTAATTCGAGGATAATTTCTGCTTTATTGCTTCACCAAGGCATAGACGTCACACTGATTAGCAACAACGGTCAGACGGCCACCTCGGTTTTAACTGCAGCTTTAGCTAGCAGAAAGGACAAGGACAAGGATAAGGACGACGACATCAACGCGTTCTGGATTCCAGACAGCAAAGCAACTGCAGATTCGCCAGGGATGGACAGAGGTCTGCTGGAAGCAGCCACATCAGGTAAGAAGCCGGCTCTGCATGACCCAGGACTTCTGCTTGGAAGGACAGTGCAGGGGAACACCTGCCTCCACATAGCATTGGTCCATGGCCACGAGGAATTCTGCAAGGATATCTTGAAGCTGGACCCGTCCCTCCTCTGCACTGTAAACGCGGAGGGCGAGACGCCGTTGCTCGCCGCCATAGAAAGTGACAATGTCTATTTAGCTTCTTTTCTTCTCAGTCACTGCTGCCGCCGCCACGACGATCTCGATATGAGGGAGGCGATGGTGAGGCAAGACAAGCAAGGATGCAATGCGCTGCACCACGCCATCCGCAGGGGACACAGGAAGCTTGCGCTCGAGCTGATAGAAAAAGAGCCTGCGTTGACGAAAGCTGTTAACAAACACGATGAATCGCGCACAAGTGGTGACCCTCTTCTCTGTACTGCCGCATACCGGGGCCATGTTGGTGTTGCTACAGAGCTTCTTAAACATTGTCCAGATGCTCCATTTCTAGATGAAAAAGATGGCACCACATGTCTCCACACAGCTGTAGAACAAGGTCACATAAAGTTTGTGGAATTCGTTTTGCAGTCAAAGGAGCTTCGGAAACTCATTAACATGCGAGACAGTGACGGAGAAACTGCCCTTCATTATGCAATCCGGAAGTGCCATCCGAAGATCGTCTCTCTTTTACTGCAATGTAAAGCCCAGCTGGATCTCACAATGCTCGACAGCAATGGTAACCCCCCAATCTGGGTACCAGATGATGCCACCGACCACGCTAAGACGCTCAACTGGGGTGAAGTCTCCATGCGTATGTTGAAAGCTGATCCGCAGGACAAAGGTGAAATCTATAATCTTATAAAGACAATCAAAGATCAAGTAACTGAGAAAGCAAGGAAGGATATAAGGACATTGACTCAAACATACACAAGCAACACTTCTTTAGTAGCAATCCTCCTTGCAACAATCACCTTCGCCGCTGCTTTTACCTTGCCTGGAGGATACAGTAATGATGCTGGAAGTGAGGGGCTTCCTATCATGGGTAGAAAGCTTGCATTTCAGGCATTCTTGATATCTGACACCTTGGCAATGTGCACGTCACTTACTGTTGCCTTCGTATGCATCATAGCAAGGTGGGAGGATCTTGAGTTCTTGCTTTACTACAGATCTTTTACTAAGAAGCTCATGTGGTTTGCATATTTTGCAACCACTACCTCATTCGCAACTGGTTTATATACAGTTTTGGCCCCTCACCTTCCATGGTTGGCCATTGCAATTTGCGTTGTGTCAGTTTTGGTGCCCATTCTCACTAAGCTTATTGGTGAATGGCCAGTATTGAAGCTCAGGATTCGATTGCTTGGATCTTTCGAGTCCGATCTCATCGATATGGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAIGTAATSNNLGESSIDKCVPEAKVISDTAGLEESKDNVGSSTSSPAIDPECLKAAISGDATSMHDMASQDPNVLLGTTAAGNTCLHISCTQGHEEFCKTVVVLKPSLLAAVNAHNETPLITAAKHGSRASLSLASLLLKFCQCHQLSEAITQKDKKGCNALHHAIRSGDSKLALELIKAEPALSRVPNNDQESPMFIAAVRNLTDVVGRLLEISDAAHGGSGKQNALHAAVRNGNPDIAKRIMEVHPWMAREEIGDDKPAATPMWRAVNDGKIDVVTVLLKYDPSLGYLMNREGSSLLCTAGRNGHVAVARELLKHCPDTPYCSETGWTCLHAAAYTDRIEFVRFVLGSEQLRHLVNIQDKYGRTALHLAAEKLNSRIISALLLHQGIDVTLISNNGQTATSVLTAALASRKDKDKDKDDDINAFWIPDSKATADSPGMDRGLLEAATSGKKPALHDPGLLLGRTVQGNTCLHIALVHGHEEFCKDILKLDPSLLCTVNAEGETPLLAAIESDNVYLASFLLSHCCRRHDDLDMREAMVRQDKQGCNALHHAIRRGHRKLALELIEKEPALTKAVNKHDESRTSGDPLLCTAAYRGHVGVATELLKHCPDAPFLDEKDGTTCLHTAVEQGHIKFVEFVLQSKELRKLINMRDSDGETALHYAIRKCHPKIVSLLLQCKAQLDLTMLDSNGNPPIWVPDDATDHAKTLNWGEVSMRMLKADPQDKGEIYNLIKTIKDQVTEKARKDIRTLTQTYTSNTSLVAILLATITFAAAFTLPGGYSNDAGSEGLPIMGRKLAFQAFLISDTLAMCTSLTVAFVCIIARWEDLEFLLYYRSFTKKLMWFAYFATTTSFATGLYTVLAPHLPWLAIAICVVSVLVPILTKLIGEWPVLKLRIRLLGSFESDLIDMV</aaseq>

Gene Sequence

<dnaseqindica>1..715#812..1380#2833..3299#3645..4026#6553..7152#ATGGCCATCGGTACAGCTGCAACTAGTAATAACTTAGGAGAATCAAGTATCGACAAGTGTGTCCCGGAAGCAAAGGTAATCAGTGATACCGCCGGATTAGAAGAATCCAAAGATAATGTTGGCAGCAGTACTTCTTCACCAGCAATAGACCCAGAATGCCTGAAAGCAGCGATATCTGGTGATGCAACATCAATGCATGACATGGCTTCACAGGATCCAAACGTGCTGCTTGGAACAACCGCGGCCGGCAACACCTGCCTCCACATATCCTGCACCCAGGGTCACGAGGAGTTCTGCAAGACTGTAGTGGTGTTGAAGCCGTCTCTCCTCGCTGCCGTCAACGCACACAATGAAACACCCCTCATCACAGCTGCCAAACATGGAAGCCGTGCTTCCTTATCATTAGCTTCTCTTTTGCTGAAGTTTTGCCAATGTCACCAGCTGAGCGAGGCAATCACACAGAAAGACAAGAAAGGATGCAACGCGCTGCACCACGCCATCCGCAGCGGCGACAGCAAGCTCGCGCTGGAGCTCATAAAGGCGGAGCCAGCATTGTCGCGAGTTCCCAACAACGACCAAGAGTCACCCATGTTCATTGCAGCGGTGAGGAATCTTACAGATGTCGTCGGGAGACTGTTGGAGATTTCTGATGCTGCTCATGGGGGATCTGGTAAGCAAAATGCTCTGCATGCCGCCGTGAGAAATGGCAATCCAGGTGAGACCGTGAGAGTCTAGCTAGTATTGATCGATCGTTACATACCATATTAATTTACTTGATCTTCTTGTTTTGCCATTTTTCATTTCCTTCCAGATATTGCTAAAAGGATTATGGAGGTACATCCTTGGATGGCCAGAGAAGAGATTGGTGATGACAAGCCTGCAGCTACTCCAATGTGGCGAGCAGTAAATGATGGCAAGATCGATGTCGTAACAGTACTGTTGAAATATGATCCGTCTCTAGGGTATCTAATGAACAGAGAAGGCAGTAGTCTTCTTTGTACCGCCGGACGTAACGGCCATGTTGCTGTTGCTCGAGAGCTTCTTAAGCATTGTCCAGATACTCCATACTGCAGCGAAACAGGCTGGACGTGTCTTCACGCAGCTGCATACACTGATCGCATAGAGTTTGTTCGGTTTGTTCTGGGGTCAGAACAACTACGGCATCTCGTTAACATCCAAGATAAATACGGACGAACTGCTCTGCATCTTGCAGCAGAGAAGCTTAATTCGAGGATAATTTCTGCTTTATTGCTTCACCAAGGCATAGACGTCACACTGATTAGCAACAACGGTCAGACGGCCACCTCGGTTTTAACTGCAGCTTTAGCTAGCAGAAAGGACAAGGACAAGGATAAGGACGACGACATCAACGCGTTCTGGGTATGTACTTCCACCATCCTATACTTGTCTTTATAATATTTAAAAGTTCTATTAAAATAGTTATCACTATAACATCACTAGTACATAAAAGATTTTTCCTTGCGAGCAAAATGTATTTCTCCGTGCGGAGGTAGCACCCGTCTGCACCTAGGGGTCTGTGAAATCAATATTTTCACGTGCAGGCAGCTCAACCGTACGGGATAATGTATTATCCCAGTCGGCTAGCATGTCCTAGGACGACCGCACGGGATTAGTCACCTTAGCACGTGCTAGCCGTTACGGAAGATGTACGCATTTTTTTGTGTGTTCTTTTCAATTGTAACGTTAGATATAAATTACACGAGCTCAATTAGAAACATCGAAATATCTAATTACGTAGCATATGTACATGTCTAGTGTTCATAATATTACAAATTTCTCCCTCCGAAATATATCTTTTTTAGTCTATAGCATGTTCTCTCTCTCACTCTCTTAGGTTTTCGAATTTGGGGTCCGTAACAAGTTCGCTATAAGGGTCGGAGAACTCCCCTAGATGGTTACAGATATTGCGACGAATGAACTGGCATAAGTCTGCGCAGAAGTTGAGAAGTATTTTTTGATCGAACCGACTTACGGCGTATGGTATTCTCAGGAGCTATGGAAAATATAAGAAAAATGATATGTGTTAAAATCAATTTAAATGAATTATTTCCTATATGTAATGAGCACGATGACTTACATCTGTAAACTCAGTTTTGTATCTCTCACAGACCCTAAGCACCTCACACACGTAATATCCATATAGATTGGTGGTGCTAGGTTGCTTGTAACACTGTGTAAGAATAGTAGACACGCCATTATTTAGAACTGACAATCACATTATATATTTAACGAATATATGATCACATACCGGCCATCGTCCCTTTACGATAAGCTACAGAGAAGAGAGAATAGAGAGAGAGAGGGACAGGATGGGACGGGACGGGAGGGAAGCGTGGAGAGGAGGGAGGCCTAGGCGGCGGCGTGCATTGGCTCCCACGCGCTGGGAGGGAGGTGGGCCCAGGCGGTGTCAACCTCGCCTACCGCACATGTGCGCCTAGAGGGGGCTGGGCGGGAGGTGACGGGTCGGCTGGGTTGGGTTGGATAGGGAGGGATCCCGGGTGTACAATAGTCTTGTCATATACTCCCTCCATCCCAAAATGTTTGACCGTTCGTCTTATTCAAAAAATTTAAGTAATTATTAATTATTTTCCTATCATTTGATTTATTGTTAAATATACTTTTATGTATATATATAGAGTTTTACACATTTAACAAAAGTTTTTGAATAAGACGAACGGTCAAACATGTTTAAAAAAGAATAGCGTTAAACATTTAGGGAATGAGGGAGTATACATATATATATATATATTTATTTATTTATATATCGTGTAATTAAGGAAGGAATCATATTCATTTGTTACTTGCATGCAGATTCCAGACAGCAAAGCAACTGCAGATTCGCCAGGGATGGACAGAGGTCTGCTGGAAGCAGCCACATCAGGTAAGAAGCCGGCTCTGCATGACCCAGGACTTCTGCTTGGAAGGACAGTGCAGGGGAACACCTGCCTCCACATAGCATTGGTCCATGGCCACGAGGAATTCTGCAAGGATATCTTGAAGCTGGACCCGTCCCTCCTCTGCACTGTAAACGCGGAGGGCGAGACGCCGTTGCTCGCCGCCATAGAAAGTGACAATGTCTATTTAGCTTCTTTTCTTCTCAGTCACTGCTGCCGCCGCCACGACGATCTCGATATGAGGGAGGCGATGGTGAGGCAAGACAAGCAAGGATGCAATGCGCTGCACCACGCCATCCGCAGGGGACACAGGAAGCTTGCGCTCGAGCTGATAGAAAAAGAGCCTGCGTTGACGAAAGCTGTTAACAAACACGATGAATCGCGGTGATGAGGAATTTCACCGATGTGTTCGACAAACTGTTGGAGGTTCCTGATTCTGCTCACGGTGGAACCTCCGGATACAATGCTCTGCATGCTGCCTTCAGAAATAACAATACTGGTGAGACCCTCATCGATCTAGCTATATGTGCTTGTTAACCATTAATATTATCCATGCCTTCACATTTTTTTCTTAGATATCGCCAAAAAGATTATTGAGACTCGCCCTCAATTGGCAAGAGAAGAGAACAGCGCACGGGTTACTCCAATGCAATTTGGTGTGCTTGAGAACAAGATTAACGTGCTAAACGTATTGTTGGAACATGATTTCTCTTTAGGATATATAATCAGCACAAGTGGTGACCCTCTTCTCTGTACTGCCGCATACCGGGGCCATGTTGGTGTTGCTACAGAGCTTCTTAAACATTGTCCAGATGCTCCATTTCTAGATGAAAAAGATGGCACCACATGTCTCCACACAGCTGTAGAACAAGGTCACATAAAGTTTGTGGAATTCGTTTTGCAGTCAAAGGAGCTTCGGAAACTCATTAACATGCGAGACAGTGACGGAGAAACTGCCCTTCATTATGCAATCCGGAAGTGCCATCCGAAGATCGTCTCTCTTTTACTGCAATGTAAAGCCCAGCTGGATCTCACAATGCTCGACAGCAATGGTAACCCCCCAATCTGGGTACCAGATGATGCCACCGACCACGCTAAGACGCTCAACTGGGTACGTACGCATATGCTCTTCACAACATATATAGCGTCTATAAATACTAGACTAGTACATTCTCATTCCTATACATATGTCATCGATTTCTATTCTAATATATTAAAAAATAGTAAACGATGCTATAATGTTGAAAAATATCTCTTATTTAAGCAATTTGCAATGCAAGGTCTAATTTTCAGTTGTTAAAGAGAAAAGAGTCCCACTACATTCCTACCTACTAGTAATAGAAAGCAATCTTAACCGTTGATCTCATTTGATCGAAAGGTTGAGATTTATTTATACAACCATCCCAGTTAGCGGTACTAGAAACATGAAAGGGTATTATTGTCCGTGCAGAAGGGTATAATCATCATTTAGCAGTGACTACACCAACTTTTTCTTCGATTTTCGCATGCGGCTGGCCGACCCGCATGCGTGAAAAGGTTTGCGAAAATCGTTATTTTCCCATGCGGGTTGGGCAACCGCATGCCAAAACAGGATTTTCGCCTACAGGCACCTAAGCCAGCCGCATGCGAAAATATTTTTGGCAAAAAAAATAAATTCAAAAAAGGCAGAAACACTAGCCGCACGCCGCCTGCCACGCCAGATCCGCTTTGCACGGCCGCCTGCCACTAGCCGTGCCAGATCCGCTCTGCCGAGGCCGCCGTCGTTCCCCACAGCCGTCGTCGCCCGCCGCCGTCGTCGATCCGCAACCTCTGGCCGTCAAGCCTGCAGCCGCCATCGCCGTCACCAGATTCGCCGCCGCTCCCACCGTCACCGGCGCTAGATCCGCCATCGTGCGTGGGGGTGGGAGTGGCCGCCGTCGCCGATGTTGGCGCTGCCAGATCAGCAGCTCTCACCGGCCGCCGTCACGGGGGTCATAGCCGCAACGAGGTGTGACGGAACCCCCCTCCCCCGAAGAGCGCCGCCGCCCTCATCGTCCACCATCGCCGCCCACCATCGCCAAGGTCGCAGCCGCACCCAAAGATGGCAGATATCCCCCCTCCTGGAGGGCGTAACCGCCGGATCCGCCGCCCTCGCCGTCCACCGTCACCACCCGCCATCGCGAAGGCCGCAGCCGCACCTGAGGGCGGTGGATCCGGCCCTCTCGAGGGCGCCGCCCGCTGTCGCACCCTTGCCATCCACCTGCCGCCGCACCCAATGGCCGGCCTCCTCGTCGGCGTCACCGCCTACTGCCCCCCACGCTGATTTGGAGGAGGAGAGGAGTGAGAACACAAGGAGAGGAGAGGAGAGAAATATCAAGAGAGAGAGAGAGGAGAGGGGTGAAAAATTTTGAAGTGGTGAGGATGGTAAGAGAGAGCAGGAGAGAAAAAAAGTAGATTTTTGCATGCGACTCATTAAGAGGACCATATGCAATAATAGTCCTTTTTTTTTCATGCGGTTCCCTTAAAAGATCCGTCTGGAGAAATCAATTTTTGCATACGCGGGCACTTACGGGCTGTTTGGAAACTATTGGGAGTTTGGTCCAGAAAAACGTTTTCTGTAGTACAACATATCAGTATATCATGCCGAGCACCACCGTAGAAGACTTAATTAGCTTATGTGCAGGAGGTAGATAAATAACTGACCAAATATATATAGAAGAATATTAAGAGAAATTTATTCACGAGTGGAGAAAAATACACACTCACTGTTACAGAAATGAGCCTTCGTGACAGGTCATCCATCATAGGTGACTTCTCTCATTGGTTAAAAAGTAGCCCGTTTGATAAAATATACTTACGAGGGATAAGCCGTAGAAGACTTAATTAGTTATCATACGCTGATATGAGTTCATCTGACGGGAGTTATAACCCGTCACTGACCACAATAATGATAAGTCTTATATGACGGGTATAGAATCTCCTAAAAAACAAGAGATTGTATATTTCGAAAAAAAAAACAGGAGGTTGTGCGCATCGGGGTTTGAGTTGGCGTTTGCTCGTATGGATTTGTTGTGCACCGGATTTGAATGGACAAGTTGCTGCACCGGGACAACAGATTTACAAGTTATTGTCCCTATTTACACACCCCACCCACCATTATGTATGAGCACAATTCCCTTTTCTTAACTAGCAGACATTACTGCTCATTAACTATATTGACATTAATGACCAAAATGGTGCGTTATCACTCACCAAATGAGCAGGCAACTGCTGCTAACACGTAGCACACTCTCAAACCACAGGTAGAGCCATCGACTTAGGTCTGTTTAAGTAGCTTAATATTAAAAGTAGCTGGTTGGTAGCTAGTTTCTGAAAATTTAGAAAAAGATGTGTTTTTCAGCTTCTGGCTTTAGTTCATTTCTGGATTCTAAAACTATTTCTGTTATATTCAGCACGGTATAGGAATTACATCAATCATCAGTAATTCAAGGACACTTCAAATTGTTTAGTTTTATTTTAAATTTGCAAATTGTGGCAGACAAATTGAAACACACAGGTACAGGGAAGTGGGCGAGCACCAAAATTGTGTGTATAGCTCCTTGACTATCAATCATATTACTATCATGTCCACGCATAACTTTGTAATAAATTAATGCAGGGTGAAGTCTCCATGCGTATGTTGAAAGCTGATCCGCAGGACAAAGGTGAAATCTATAATCTTATAAAGACAATCAAAGATCAAGTAACTGAGAAAGCAAGGAAGGATATAAGGACATTGACTCAAACATACACAAGCAACACTTCTTTAGTAGCAATCCTCCTTGCAACAATCACCTTCGCCGCTGCTTTTACCTTGCCTGGAGGATACAGTAATGATGCTGGAAGTGAGGGGCTTCCTATCATGGGTAGAAAGCTTGCATTTCAGGCATTCTTGATATCTGACACCTTGGCAATGTGCACGTCACTTACTGTTGCCTTCGTATGCATCATAGCAAGGTGGGAGGATCTTGAGTTCTTGCTTTACTACAGATCTTTTACTAAGAAGCTCATGTGGTTTGCATATTTTGCAACCACTACCTCATTCGCAACTGGTTTATATACAGTTTTGGCCCCTCACCTTCCATGGTTGGCCATTGCAATTTGCGTTGTGTCAGTTTTGGTGCCCATTCTCACTAAGCTTATTGGTGAATGGCCAGTATTGAAGCTCAGGATTCGATTGCTTGGATCTTTCGAGTCCGATCTCATCGATATGGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030498