BGIOSGA030550

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Revision as of 09:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030550| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030550, complete gene.| tag = OsI_309...")
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Gene Name

BGIOSGA030550

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030550, complete gene.

LocusTag

OsI_30959

Ensembl Transcript ID

BGIOSGA030550-TA

Ensembl Protein ID

BGIOSGA030550-PA

Length

5040

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9150405..9155444

Sequence Coding Region

9150405..9151474,9155180..9155444

Genome Context

<gbrowseImage1> name=IndicaChromosome09:9150405..9155444 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:9150405..9155444 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGAGCCCATTCGAAATGTACGAGGAAGATATTATCCTTGTCATGAAGGAGGAGAAAGTATCCAGGGATGAAGCACTAAGGTTGTTACTTGAGGAATGGATGGATGCCAAGCGCAAATTAGAGGAGAAGCTCAACCGGGTCTTGGAGAAGTTTGAAGAGATGGAAGCTCACAATGGCGCAGAAGATGCAACTGTCATCATCAAGGCAGCCACAACCGACCTCAGGGAGGCATCATCTCCAACACCCAAGACATCGCTATCTCCAGTGTGCTTCAATGAAAACAGCATGCATGCGGCAACGAGCTCAAGCCACAACATCGAGCTGACTGCCTTGACGGTTGCCAAGTGCTTGAAGGGGTGCTCTAATCATGGAGTTGGAGCTGGTAGCTTGATGCCCACAAGGTGCCCGACGAATTGCTCAAGTCCTGGCGTCATACCCGACCACACCATGGCTACGGTGGTTGCATGTGCCACCACTTCTATGGCGTTCATGGAGTTGGTTGTTGGAGAGGAGGCAACCTGTGACACCTATACCGGGACCACTAATTGTCCTGAGGTGACACACACCAAGTGTTCGACATTGGGCCTTGACGTCAAGTGTGACACCGACCAAGTCATGGTCGCATTCCTGGCCCAGCCTTGTGTGTTCCTTCTCAACATGGACAACACAGGTACCAAACTAGTAAACATGGTAGAGGTGACTAGTCTACAGACTTGGGCACCTCCCTGTCGAGTCATATGCAAGGGTTCCCTGGTTAAGAAGCATCCAGCAACTTGGTTAGAGTTTGAGTGGAAACAACATGATGTGCAACAGATACAACCATGGCCACCGCCACAGTGGCTAGAAACTTGGTTATTCCTTAGTTGTTTTTCAGATGTAGCGCCACATGATTCAGTGAGCCCATTCATCATTGACATAATACCTTATGCACTAGATGATAGGGAAGAAATGCTCAGGAGATCAATTGAGCTGAGCCCCTGTACACATCCACAGTATTTGGGGAAGGGGAAATATTGGCCAGGAACAGCTATGTCCTATGGAGGCAATCACCTGTTAGCAGTCAAAAGTATCCTTGACGCAGTCGACCCGCGGCTGAGGGGCGACGACGATGACGAGGAGCACAGCGAGCTTTGGCAGATGGAGCGCGTGCTGGTCGTCGGCCTCTGGTGCGCGCACCCTGACCGGAGCGAGCGGCCGTCCATCGCACAGGCCATGCACGTTCTGCAGTCCGACGACGTGACGCTGCTGCGCGCCGGCGCTGCCGCGGCAGTTGTACAGGGCCGTGCCACAGCTCGCAATCACTGGACGTGCGTACGGGTCTCGATCGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MSSPFEMYEEDIILVMKEEKVSRDEALRLLLEEWMDAKRKLEEKLNRVLEKFEEMEAHNGAEDATVIIKAATTDLREASSPTPKTSLSPVCFNENSMHAATSSSHNIELTALTVAKCLKGCSNHGVGAGSLMPTRCPTNCSSPGVIPDHTMATVVACATTSMAFMELVVGEEATCDTYTGTTNCPEVTHTKCSTLGLDVKCDTDQVMVAFLAQPCVFLLNMDNTGTKLVNMVEVTSLQTWAPPCRVICKGSLVKKHPATWLEFEWKQHDVQQIQPWPPPQWLETWLFLSCFSDVAPHDSVSPFIIDIIPYALDDREEMLRRSIELSPCTHPQYLGKGKYWPGTAMSYGGNHLLAVKSILDAVDPRLRGDDDDEEHSELWQMERVLVVGLWCAHPDRSERPSIAQAMHVLQSDDVTLLRAGAAAAVVQGRATARNHWTCVRVSIG</aaseq>

Gene Sequence

<dnaseqindica>1..1070#4776..5040#ATGTCGAGCCCATTCGAAATGTACGAGGAAGATATTATCCTTGTCATGAAGGAGGAGAAAGTATCCAGGGATGAAGCACTAAGGTTGTTACTTGAGGAATGGATGGATGCCAAGCGCAAATTAGAGGAGAAGCTCAACCGGGTCTTGGAGAAGTTTGAAGAGATGGAAGCTCACAATGGCGCAGAAGATGCAACTGTCATCATCAAGGCAGCCACAACCGACCTCAGGGAGGCATCATCTCCAACACCCAAGACATCGCTATCTCCAGTGTGCTTCAATGAAAACAGCATGCATGCGGCAACGAGCTCAAGCCACAACATCGAGCTGACTGCCTTGACGGTTGCCAAGTGCTTGAAGGGGTGCTCTAATCATGGAGTTGGAGCTGGTAGCTTGATGCCCACAAGGTGCCCGACGAATTGCTCAAGTCCTGGCGTCATACCCGACCACACCATGGCTACGGTGGTTGCATGTGCCACCACTTCTATGGCGTTCATGGAGTTGGTTGTTGGAGAGGAGGCAACCTGTGACACCTATACCGGGACCACTAATTGTCCTGAGGTGACACACACCAAGTGTTCGACATTGGGCCTTGACGTCAAGTGTGACACCGACCAAGTCATGGTCGCATTCCTGGCCCAGCCTTGTGTGTTCCTTCTCAACATGGACAACACAGGTACCAAACTAGTAAACATGGTAGAGGTGACTAGTCTACAGACTTGGGCACCTCCCTGTCGAGTCATATGCAAGGGTTCCCTGGTTAAGAAGCATCCAGCAACTTGGTTAGAGTTTGAGTGGAAACAACATGATGTGCAACAGATACAACCATGGCCACCGCCACAGTGGCTAGAAACTTGGTTATTCCTTAGTTGTTTTTCAGATGTAGCGCCACATGATTCAGTGAGCCCATTCATCATTGACATAATACCTTATGCACTAGATGATAGGGAAGAAATGCTCAGGAGATCAATTGAGCTGAGCCCCTGTACACATCCACAGTATTTGGGGAAGGGGAAATATTGGCCAGGAACAGCTATGTCCTATGGAGGCAATCACCTGTTAGCAGTCAAAAGGTTATTGGCAAGGTTCAAGGAAGATTTCTCTATGGTTCCTAGTTGGATGAGCTGGAATTATGTGAGAAGAATATTGTGGTCTCCGGGCTGTTCTCTGCTTTCTGCTAGAGAACTTTGGAAGTGTTTACAGTTATTTTGTGGTAAAGGAGAATTGTTGGATGGTGAGAGTTTTATGCAGCGAAGGAGATCGAACATGACATCCTATGAGGTTTGCTGGGAAAGGAAATTTATATCAAAAACATATAGTGATTCTTCTCAGAATTGGTTCGAGTTGTATACTTCGCTCTCATCGGAATTATGGCAGAAGCCCACCTGGCTATAAACTGATGCAATCAGAAGCTACTTCTGGTGCAACATATTTAATTAGTGCGGATTGACTATAACCAGAGAGCTCCAAGTTATCATACCAAATAACACTTGAAGATGGTGAAGTAGATGTGTACTGGTTGAATACTAAGGACCAAGAATTCTCGTATGAACAATTGATATTCCACAAAGAGGAGCTTGCTACAGTTCGGGTTTATCAAAGTACTAGTTTTATCAAAAGTAAGGGCAGTGGCAGGGTTGTCACCATTGCAGCAAGTACCTCATTTACCAACTCTATACCAGTGCCACTAGCTAGTCATGTTTGGAAGGAATTTTCTTGGACACTACATTATTGGAATGATGGGTCTGTGTGGAAATTATGGTTATGTTATATGGTCTTTCTTATCAGTGTCAAACAAGCTGCGGTGCCTATGGATATCTTGGATGGAAACTTGGAAGAATCTGATCCAGCAAGATTAAAGATGTGGCCTGATCATCCAAAATATGTTCAGAGGCCGTGTGTAAATCAAAGGGATGAATTGCGTCTTAGTGCACCTGATCTACAAATATCATGGGATCCTGGTGGTTTATGTTTACTCAAGTTTCTAGCTATCTCTTCTCTTGGACAAGTCACATTTCAGTCAGTCAAATTCTCATTTCAAGACAGTTCTTCTCTCTTTCACATGCGAAGTGCCAGGATTTGCTTGAGCTGTTCTTTTGAGACGCAAGTTTTCTGTTGGCAAGCTGAAAACAATNTGGACATTGATGAAGCTTTTGGAACGATGCAGAATACTGGAGAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTACGATCCGATGCCTAGAGTTTGTGTGAAGTTGTCAGTTTCTCTGATTCCTTCGCTTCGTGCGGCTGTTTATTCTGAAAGTGATCTGCCCGACGGCAACCACCACTTGCATTGCAATGTGTTAATGCCAGCAATATCAGTTTTTCTGGGTTCTGCAAAGAAAACATATGGATCTGTAATTCAAAACTACTTAATTATTTTGCTTGGGGTGTACTGGAAAGTGGAAACACAAAAAGAGTGAGAAGTGTATTACCTTTACATAGTAAAACCCTTCATGAATCTTACTCTCTGCTATTTCTAAAGGAGTCTGCCCCCGATTATTTAGTATATTTAAGTTTACTTTCCTGTTCCTTAGTAAAATACAAAAAATGTACTTATTTCCATTCCGCACTGCTATATGCATTGCGGTGTTGCCATCATTGTCTTGCATATTGAAAATCCTAGCCAATGATCGAGTACGGTGAGCATACTCAACTATATTCCTTCTGCCCCTTTCAACAGCGACATGAAGGAAAGTCCTCCCCTTAAAATCTACAAGACCAGCGATCTCATCAGGTTGCTCCTCAATTAAATATTTGATAGTCCGAATGGCACCTGAGGATGCAGCAACGTGTATCGGATACAATCCTTCAGAATCTTGCTGGTACAACTGAACTGGGTTGGCTAGCAGTACTGGAATGAGCGGAGTGCGTGACATCCACGTTATTACAGTATATTCACTAAGTGATGCAGCGAAGTCTTTACAAAGTGATGCAGCGAAGTGAAGTGGCGTGCTTCGATTTTTGTCAACTTGTTCTGCGAGGTCCTTGTTCCAATTCAGTAACATTTCAGTCATCTCTGCATATGTGGTGTTCAAGTCAAACTAGGTTGTGGCATACAAACTTTGCAGTAGCTAAGAAGAGGAATTCAACATAAATATATTTTTATAGAATCCACTTCTACAGAACGAAAATTAGACCATCTATCTTCTATATCTTGGACGTAACTATACAGCCAGTGGTAGCTGATTTGCCACTTCATATATGAGAGACCCTATCCACCTATATTTCAAATAAAATTATCTCTTAAACTACTCATCCAATCTACGATCCGATTACATCGTTGTGTTCGTAACAATTAAATTTTTATAACAAGATCTCACATGATTATATTTTGATGAAAAATTATAAATTACTTTTATAATATATCTAAATTACTTTTAGATTTCACTAAATTACTTCTTCAACATATAAAAGTAAATTCAATAAAGCTTAAAAGTAATTTACATATAATATATTATAGAAGTAACTTATGAAAAAAAGAAAGTAACTTTAATGCATGCCTTTTTTTCATTGGACGTGACTACACAACTAGTGGTAGCTGGTTTGTACTCCATCTAGTGTTTCCTTTCAACTTGAAAAATGCAATAGTATGTTTCCGTTTTGTTTTAAGACACTTTTATAATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTCTCGCACTAGGCAGGCTGGGACCCGTGACGGACACGCCCGACGGCTTCTTGTTGTTCTGCTGAAATGGGTGTGGAACCTGTACGGCCGGAGCAGTATCCTTGACGCAGTCGACCCGCGGCTGAGGGGCGACGACGATGACGAGGAGCACAGCGAGCTTTGGCAGATGGAGCGCGTGCTGGTCGTCGGCCTCTGGTGCGCGCACCCTGACCGGAGCGAGCGGCCGTCCATCGCACAGGCCATGCACGTTCTGCAGTCCGACGACGTGACGCTGCTGCGCGCCGGCGCTGCCGCGGCAGTTGTACAGGGCCGTGCCACAGCTCGCAATCACTGGACGTGCGTACGGGTCTCGATCGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030550