BGIOSGA030565

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Revision as of 09:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030565| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030565, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA030565

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030565, complete gene.

LocusTag

OSJNBB0085I16.34-2

Ensembl Transcript ID

BGIOSGA030565-TA

Ensembl Protein ID

BGIOSGA030565-PA

Length

4000

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9343243..9347242

Sequence Coding Region

9343243..9343608,9343817..9344011,9344111..9344290,9344388..9344582,9346092..9346190
,9346285..9346791,9346901..9347242

Genome Context

<gbrowseImage1> name=IndicaChromosome09:9343243..9347242 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:9343243..9347242 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAATGGAGGTTGTTGGAACTGAGGCTGCACCAGCAGAGGTTAAAATAACTGATGGAGAAGTGAACCTTTTCCAAGAGAATGAAAGTAAAGCAACTGCCAAGGAACGTGAGGAGGCGGTTCTTTTTGGTTCAGATAACAGCACAGCTACAGCAAATGGAGCCGCAAATGGCGCTGATTTGGCACCCCCAAAGGATGCAGAGGAGGACTGGCCTGAAGCTAGGAAAACACATAGCTTCTTCTTTGTCAAGATCCGCTTACTTGAGGACCCTAAGCTGAAAATGAAGATTGATCAGGCAGAAAAGGACTTCCAGAAGAAGATTCAAGCTCGTTCTCAAATTTTTGAGGCTATAAAAGCCAAGAAGAATGAGCGCTTCGGTATTATCTCAGAGCTGAAGCCATTGGCTGCTGAGAACAAGCAATACAACGAAGCCGTAAGTGAGAAGTTGAAGGCGATAGAACCTCTTAGAAACCGTTTAGGAAAGTTCCGCGATGAAAACAATGCTATCCGGGCACAGGGTGCAGGCATATGTTCTTCAATTGAAGAGCTTGAGAAATCGATCAAGAGATTGAACGACCGCATATCTCATGAGAGCATACCCTTGGATGAGGAGAAGCGGTTGATCAAACAGATTAGAGAGCTTGAAAAGACCAGACCGAAAGTCATCTCCACTTCTGCTAACCGAGCTCAAATCCAAGATACAGTGGTCGAAAGAGACGCCATACAGGATCAGGTTAAAATCATCGGGGAGGGCATTGATGGAGTAAAGAAGGAGCGACAAGCAGTCAGGTCTAAAATTAAGGTCCTGGAGGATGAGCTAAAGGCTATTGACATGGAGATGGGTTCGCTTCAAGAAGATTTAACAGCTGCCACTGCCAGAAAGGACAAGGCACATGAATCATTGGTCCAATTGAGACATGCACGAGATGCCTATAACGCATCATTCCATCAAAACCGCCAACTTCTGAGCAAAGCTAGGGATCTTGCTTCTAGGAGTGAGCTTGCACAAGTGCAAGAGCTCTACAAGACACAGGTTGACGAATTCGTGGCAGAATGGTGCAACAGCAAGGCCTTCAGAGAGGACTACGAGAAAAGGATCCTCTCCTCCCTCAACAGTCGACAGCTTAGCCGAGATGGCCGGATGAGGAATCCTGATGAGAAACCTATATTTATTGAAACAGAGGCAGCAGCACCACCTGTAGAACAAGAGCCTATCCAATCAAAAATGCCTGCAAAACAAGCCAAGGAAGCGCCTGCTCCCCAAGCAGAGGTTTCTCCCAAAGATGAGTCCCGCGTGAAAGCAACAGCTAAGCCATCTAAGGCTAAATCCTCTCTGGATGCTGATGATGACTATGAGGCCGAGTCTCCCAAGGAGAAGCCAAAGCCTAAAGAGGTTGATGTAGCTAAGTTGAAAGAGATCAAGAGACAGGAGGAGATGGAGAAGAATAGACTTGCCCTGGAAAGGAAGAAGAAGCTGGCCGAGAAGCAAGCAGCGAAGGCAGCAGCCCGTGCACAAAAGGAGGCAGAGAAGAAACTCAAGAGAGAGGAGATGAGGGCCAGGAGGAGGGCTGGGGCAGCTGACACCGAGGCGTCCACTGAATCGGACAACAGGTCTGATGGAGCAGCGGAGGCACAAGCAGAGGACGACTCCGCTCCTGCTTCTGCTCCGGTGATGAGAGAACAGAGGGAGAGTGTCCGGTACAGCAGAAACGTCGTGACCAAGAGCAAGGCCCCGCTGCCGAAGGCGATCCTGAGGAGGAAGAAAGCCCAGTCGTACTGGTCCTGGGCTGGCCCTGCTGCTGCAGTGGCCGCCGCGCTCGTCGCCCTGCTTGCCGTGCTAGGCTACTACCAGTACTACCTCCCAGCGAGCGCTAGCAACTGA</cdnaseq>

Protein Sequence

<aaseq>MGMEVVGTEAAPAEVKITDGEVNLFQENESKATAKEREEAVLFGSDNSTATANGAANGADLAPPKDAEEDWPEARKTHSFFFVKIRLLEDPKLKMKIDQAEKDFQKKIQARSQIFEAIKAKKNERFGIISELKPLAAENKQYNEAVSEKLKAIEPLRNRLGKFRDENNAIRAQGAGICSSIEELEKSIKRLNDRISHESIPLDEEKRLIKQIRELEKTRPKVISTSANRAQIQDTVVERDAIQDQVKIIGEGIDGVKKERQAVRSKIKVLEDELKAIDMEMGSLQEDLTAATARKDKAHESLVQLRHARDAYNASFHQNRQLLSKARDLASRSELAQVQELYKTQVDEFVAEWCNSKAFREDYEKRILSSLNSRQLSRDGRMRNPDEKPIFIETEAAAPPVEQEPIQSKMPAKQAKEAPAPQAEVSPKDESRVKATAKPSKAKSSLDADDDYEAESPKEKPKPKEVDVAKLKEIKRQEEMEKNRLALERKKKLAEKQAAKAAARAQKEAEKKLKREEMRARRRAGAADTEASTESDNRSDGAAEAQAEDDSAPASAPVMREQRESVRYSRNVVTKSKAPLPKAILRRKKAQSYWSWAGPAAAVAAALVALLAVLGYYQYYLPASASN</aaseq>

Gene Sequence

<dnaseqindica>1..366#575..769#869..1048#1146..1340#2850..2948#3043..3549#3659..4000#ATGGGAATGGAGGTTGTTGGAACTGAGGCTGCACCAGCAGAGGTTAAAATAACTGATGGAGAAGTGAACCTTTTCCAAGAGAATGAAAGTAAAGCAACTGCCAAGGAACGTGAGGAGGCGGTTCTTTTTGGTTCAGATAACAGCACAGCTACAGCAAATGGAGCCGCAAATGGCGCTGATTTGGCACCCCCAAAGGATGCAGAGGAGGACTGGCCTGAAGCTAGGAAAACACATAGCTTCTTCTTTGTCAAGATCCGCTTACTTGAGGACCCTAAGCTGAAAATGAAGATTGATCAGGCAGAAAAGGACTTCCAGAAGAAGATTCAAGCTCGTTCTCAAATTTTTGAGGCTATAAAAGCCAAGAAGGTATGGTCCTAGTTCTTACAGTTCTAGTTCATATAAATATGGTCAATCTTGTTTAAATTTTATCCTAAATCAGCAAGAAGTTATATTCCTTACAACTTGTTTAAAACGACTGTCATCTGCTATTGATGCTAGAGCCTAGAATATGTTGCCAATTTGAGCAGACTACGAAATTTTGGTGATATGTCTGATTTCGGAACTTAATCTGCAGAATGAGCGCTTCGGTATTATCTCAGAGCTGAAGCCATTGGCTGCTGAGAACAAGCAATACAACGAAGCCGTAAGTGAGAAGTTGAAGGCGATAGAACCTCTTAGAAACCGTTTAGGAAAGTTCCGCGATGAAAACAATGCTATCCGGGCACAGGGTGCAGGCATATGTTCTTCAATTGAAGAGCTTGAGAAATCGGTACGGCAGTACGGTTAACCTATGATAATTTATTTTTCTGTTCTTCAGTCCAATATTTGATTACATGTTTGTGCCTTCTCCATTGCTTTGTCCTATTAGATCAAGAGATTGAACGACCGCATATCTCATGAGAGCATACCCTTGGATGAGGAGAAGCGGTTGATCAAACAGATTAGAGAGCTTGAAAAGACCAGACCGAAAGTCATCTCCACTTCTGCTAACCGAGCTCAAATCCAAGATACAGTGGTCGAAAGAGACGCCATACAGGATCAGGTTAAAGTAAGTATATACAACTAAATATTTGTTTGTGCATTTATCTTCTTGAAAAAAAAATAGAATTAATAATGGCCAAACTTGTTTGCAACTGTTACTTCAGATCATCGGGGAGGGCATTGATGGAGTAAAGAAGGAGCGACAAGCAGTCAGGTCTAAAATTAAGGTCCTGGAGGATGAGCTAAAGGCTATTGACATGGAGATGGGTTCGCTTCAAGAAGATTTAACAGCTGCCACTGCCAGAAAGGACAAGGCACATGAATCATTGGTCCAATTGAGACATGCACGAGATGCCTATGTAAGTCAATGTGTCTTTAATGTCTTTCATGCGGGGCATCATGTTTTCTCTTCTAATACTATCTACCTGGTATGCCTGGACTAAGAAGGAGCAACACCTAATTTTTTAAAGTTACTTCAGTTGTGTTGCACACAGTGTTACGGGACACACGGGTCCAAAGTTTTTGACATATCAACTTGTTTCTTTTTGCCAACATGTGTCTGACTCGACTCGACTGGTGGTGCATCTTCCAGCAGAGTGTAACTGGTAGTCAAGGCAGAAACGCATTGCTTTGTTGGGGAGGGGAAAGAAAAGGCATTGGGGATAGAATAATCAATAAGTGTGAAAATGAAGTCTGTCTAGGTTGTTTTTTTTTGTCAGCGGCCAACTTTCTATCCTCTCTAGAGACTTTTTTGTGGATAAGTGGATGGAACAGTTATAAATGTCCTGGGCTCCTGGTATGGATAAACAGACTAGATAATTTTCTGTGTGCTAGAAAAGCCTAGAATGATGTACCCCCTTTCGTCCCAAAACAGTCCCAAAATATAGCTACTTGTCACCACCTACTCCCCCATATCAACCAATTCCATCTCTCATTTAATCTCTACCATCCCTCTTCTCAACCAAGCACAACCATCCCCATTTAATTTCACTTCTCTCCTTAATCATCATGAAAATTCCAGAAAGTGCTTATATTTTGGGACAAGGGGAGTAGAACATATGCTGCGTACAAGAGATTTTGTGAAATGCTTAAGTCCTTATAACAGAATTAATTATATTAGGTGAATCCTTGACTATTTAGCATTTGCTAAATCAGATGCCTGAAAATCCATGACGGATACGGATTCCTATGTCTATGTGCCGGTAACACTGGATTTACAGTTCTCAGCAAATACATATATTTGCATGTCTTCACATAACCTCAGTTACACGTCCTTGAGCTGTAAGACAGATTAATTTTTGTTTTCCCCCCAAGTTTGGTGCTTTTCAATGTATATACTGACACTATAATTACCAATCGAATTTCCTTCATGATTCATTGATACCTCTGCATAAGGGTAACCTGTTAACATGTGGTGATGAAACATGTTTCTAGTAATTAATTGTCTCATAGTTACTACTCCCTCCATTCCAAATTGATCTACATATTTCATAGGTACACCAAGACCAATAAAAGCTAATAACTCTCTCATACTATATTTACTCTAGCAACAAACTCGATGCATGCACCATCCCCACTATCTCCTAGCCAATAGCAAATCAAGATATTGCATGTGGGTTATAAATACTTGTGTGCATGGATGCATGCATCAATGTCCATTTACTCCAATGCACAAATAACGAATAGACTTAATTTATGAACACAAATATATAGATCATTTAGGAATAACCTCAAAAAAACTATATGTAGATCAATTTGGAATGGAGGGAGTATATATTAGCATGCTTAAGCTAGCTGCTTTTGACTTTGAGGATGTGGAGTTCATTTGTCTTTCTACTGATACCTCTTATGCTCCCATGTTTATCTAGAACGCATCATTCCATCAAAACCGCCAACTTCTGAGCAAAGCTAGGGATCTTGCTTCTAGGAGTGAGCTTGCACAAGTGCAAGAGCTCTACAAGACACAGGTGTGTGCGCCTCTGGAGCATTGTTTTAATAACTGTTCATCTTTTACGACTTAACAAAAATGTCCTAACTAAACTTCTGTTGTACTCTTTATAGGTTGACGAATTCGTGGCAGAATGGTGCAACAGCAAGGCCTTCAGAGAGGACTACGAGAAAAGGATCCTCTCCTCCCTCAACAGTCGACAGCTTAGCCGAGATGGCCGGATGAGGAATCCTGATGAGAAACCTATATTTATTGAAACAGAGGCAGCAGCACCACCTGTAGAACAAGAGCCTATCCAATCAAAAATGCCTGCAAAACAAGCCAAGGAAGCGCCTGCTCCCCAAGCAGAGGTTTCTCCCAAAGATGAGTCCCGCGTGAAAGCAACAGCTAAGCCATCTAAGGCTAAATCCTCTCTGGATGCTGATGATGACTATGAGGCCGAGTCTCCCAAGGAGAAGCCAAAGCCTAAAGAGGTTGATGTAGCTAAGTTGAAAGAGATCAAGAGACAGGAGGAGATGGAGAAGAATAGACTTGCCCTGGAAAGGAAGAAGAAGCTGGCCGAGAAGCAAGCAGCGAAGGCAGCAGCCCGTGCACAAAAGGAGGCAGAGAAGAAACTCAAGGTAGACAAGTCGTCGTCATCATCATCCCTCTTCCTCGCTGCCACATTGTAACCATGTTTATCTCTCTCGCTTTGCCACATTGTAACCATGTCAATGTACTTATTTTCAGAGAGAGGAGATGAGGGCCAGGAGGAGGGCTGGGGCAGCTGACACCGAGGCGTCCACTGAATCGGACAACAGGTCTGATGGAGCAGCGGAGGCACAAGCAGAGGACGACTCCGCTCCTGCTTCTGCTCCGGTGATGAGAGAACAGAGGGAGAGTGTCCGGTACAGCAGAAACGTCGTGACCAAGAGCAAGGCCCCGCTGCCGAAGGCGATCCTGAGGAGGAAGAAAGCCCAGTCGTACTGGTCCTGGGCTGGCCCTGCTGCTGCAGTGGCCGCCGCGCTCGTCGCCCTGCTTGCCGTGCTAGGCTACTACCAGTACTACCTCCCAGCGAGCGCTAGCAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030565