BGIOSGA030602

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Revision as of 09:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030602| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030602, complete gene.| tag = OsI_310...")
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Gene Name

BGIOSGA030602

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030602, complete gene.

LocusTag

OsI_31065

Ensembl Transcript ID

BGIOSGA030602-TA

Ensembl Protein ID

BGIOSGA030602-PA

Length

3422

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10320263..10323684

Sequence Coding Region

10320263..10320452,10320565..10320746,10320862..10320974,10321234..10321289,10321404..10321480
,10321673..10321792,10322332..10322408,10322498..10322561,10322721..10322771
,10322859..10322907,10323566..10323684

Genome Context

<gbrowseImage1> name=IndicaChromosome09:10320263..10323684 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:10320263..10323684 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGCGCGGGTGCGGGTGCGGGCGCGATCGCCGCTCTCCTGCGCGCCGCGCACGTGCCGCCGGCGCCGCGCGCGCGCTCGATTCGGGGCCTCGCCGCGGCGCGCGGGCTCCCTCCTCTCGTCCGCGCCACGGCGGCGGCCATCGCGCCGTCATCGTTCTGCCCTTACCTCCCGCGCCTCAGCTCTGCTCGCTCCTTCTCCTCCTCAACATCGTGCAGCGCCGGCGCGTCCCTCGGTGGCGCGGTGTCCACCTCGCCGTCCGAGCAGGAGAAGCAGCGGCAGCAGTCGGAGCTCATCTTCCTCGGCACGGGCACCAGCGAGGGCATCCCGCGTGTCAGCTGCCTCACCAATCCCTCCAAGACCTGCACCGTCTGTACCAAGGCAGCCGAGCCAGGGAATCGGAACAGGAGGCGCAACACGTCCATCCTCCTGCGCCATGCCACGCCGTCTGGCACGGCGAACATCCTAATTGACGCTGGCAAATTGAGGACAATTGATGCTGTGATTATTACTCATTCTCATGCGGATGCAATCGGAGGCCTTGATTGTCTTCGCGATTGGACGAACAATGTCCAGCCCACCATCCCGATTTATGTAGCAGAACGTGATTATGAGGTGATGAAGATGACTCACTACTATTTGATTGACACAAGTGTGGTTATACCTGGAGCTGCAGTTTCAGCATTGCAATTCAACATTATTAAAGAGGAACCATTTACAGTTCATAACCTTGAGGTCATTCCTTTGCCTGTCTGGCATGGTCAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTCGTGTATGCTACATAAGTGATGTCAGTGATATACCTAAAGAAACCTACAAACTTCTGGAAGACTGTGAACTTCTAATAATGGATGCTCTTAGACCCGATCGTTCTTCTTCAACACACTTTGGATTACCACGGGCCCTTGAGGAAGTTAGGAAAATCAAACCAAAGAAAACACTGTTTACTGGAATGATGCATTTAATGGATCACGAGAAAGTAAACAATGAACTTGCCAAGTTGATGGAGACAGAGGGGCTTGACATCCAGCTGAGCTATGATGGTCTCAGGGTACCTGTATGGCTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAGAGAGAGAIAALLRAAHVPPAPRARSIRGLAAARGLPPLVRATAAAIAPSSFCPYLPRLSSARSFSSSTSCSAGASLGGAVSTSPSEQEKQRQQSELIFLGTGTSEGIPRVSCLTNPSKTCTVCTKAAEPGNRNRRRNTSILLRHATPSGTANILIDAGKLRTIDAVIITHSHADAIGGLDCLRDWTNNVQPTIPIYVAERDYEVMKMTHYYLIDTSVVIPGAAVSALQFNIIKEEPFTVHNLEVIPLPVWHGQGYRSLGFRFGRVCYISDVSDIPKETYKLLEDCELLIMDALRPDRSSSTHFGLPRALEEVRKIKPKKTLFTGMMHLMDHEKVNNELAKLMETEGLDIQLSYDGLRVPVWL</aaseq>

Gene Sequence

<dnaseqindica>1..190#303..484#600..712#972..1027#1142..1218#1411..1530#2070..2146#2236..2299#2459..2509#2597..2645#3304..3422#ATGGCCGGCGCGGGTGCGGGTGCGGGCGCGATCGCCGCTCTCCTGCGCGCCGCGCACGTGCCGCCGGCGCCGCGCGCGCGCTCGATTCGGGGCCTCGCCGCGGCGCGCGGGCTCCCTCCTCTCGTCCGCGCCACGGCGGCGGCCATCGCGCCGTCATCGTTCTGCCCTTACCTCCCGCGCCTCAGCTCTGGTGCGTTGCCTGGCGTGAATTGCTGCTGCCGTATGACGTACATACAGCTCGCGCCTCAGCTGTTCGACGTAATGCCTAGCTCCTTCTGATGAATTGCTCCCGTTTCTTCCAGCTCGCTCCTTCTCCTCCTCAACATCGTGCAGCGCCGGCGCGTCCCTCGGTGGCGCGGTGTCCACCTCGCCGTCCGAGCAGGAGAAGCAGCGGCAGCAGTCGGAGCTCATCTTCCTCGGCACGGGCACCAGCGAGGGCATCCCGCGTGTCAGCTGCCTCACCAATCCCTCCAAGACCTGCACCGTACGGCCACCCTCTTCATTGCAGCAGCGCGATGTCGTTTCTATGTCATACTTTGTGTTGATTGGTTGCTCAATGTCATTTGCTCACTTTCTTCTTTGTCCTTTCCTGCACGCAGGTCTGTACCAAGGCAGCCGAGCCAGGGAATCGGAACAGGAGGCGCAACACGTCCATCCTCCTGCGCCATGCCACGCCGTCTGGCACGGCGAACATCCTAATTGACGCTGGCAAGTAAGTATGCGCCTTTGGTTGATCTGGGAGTCTGAAAGTTTGCTTCATTTCTCTTCCATTCTGGGTTATCATTCTTGAATTGAAAAAGAGTGAGAGAGAGTAATGAGACACCACTGTGTTTTTCTCTGCTTCCTCTGCTAGGTTCTTCTACCACTCTGCGCTCCAGTGGTTTCCTGCTTATGGGTATTGAACTGCTGACGTGCTCCATATTTGTTTCCGAGAAATTTAGCCTTGTTAAACGCTAGCTTCTGACATTCAGATTGAGGACAATTGATGCTGTGATTATTACTCATTCTCATGCGGATGCAATCGGAGGTTTGCAAATACTTTTATTGAAGCAAGCAACTTTATTAATATTGATTGAGACAACACACCATGCTCGTTTTGCTCTTGAGCTTTCTAAAAGAAATAAGAACTCCTTTGGTACAGGCCTTGATTGTCTTCGCGATTGGACGAACAATGTCCAGCCCACCATCCCGATTTATGTAGCAGAACGTGATTATGAGGTTGGTGCTATGTTTGTAGTTTTGTTTTTGCTTCTCTAGAATTGCAGCCTCAGAAAGTTTCATTCCTAACGTAGACAACTGTCATGCCAATTGAAATGAAACTCACAACTTCTCTTTATGTATGCAAGATTTTAACAACTGGGCCACTGGCTCACTTTTCTTTCTATGCTTGTACTATTTGTTCGCCATCAGGTGATGAAGATGACTCACTACTATTTGATTGACACAAGTGTGGTTATACCTGGAGCTGCAGTTTCAGCATTGCAATTCAACATTATTAAAGAGGAACCATTTACAGTTCATAACCTTGAGGTCTGTTGTCTAAAATAATAATTTATGTAAGCAAGAAGTAGACATAAACCACACGCTATCAGCAATAATTAGCTCTTCAATCCGCAAAGAAATTTCTTTTTCTCAACTCAGTTGACTGCACTGTAATAATACTTTATACTCTATGTAGGCAGGTAATAAAAGGATAAATTTACTTCTATATCCTTATTTTTGTTTACTATCATAACTTAATTAACTGACCATGTCTATACTTTGAGTTATTTTAATTCCAATGTTGTTCTGAGTTAAATGTTAGTAAATCCGTCATGAACCTATTAGTTACATCCTATGTTCTCAAAATATGTTGTTTTGGTCATGATCTCCGGTAGACACCTGTGACCATCGATTTGTTGGCCAAAAGTATGTAAACTATAAGGTAAGTAATTTTGAATGTGCCTTTTTAAATTGCATGTCCAAACGAAATTAATATGTTTTTAATTATGTCAGTTTGCGCTAAGTGTACTTTCGAGTGTACCCTGTCTAATTTATTTTGCTGAAGATATGATTTCTGTATTTTTCAGGTCATTCCTTTGCCTGTCTGGCATGGTCAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTCGTGTATGCTACATAAGGTAGATCAAAGTGCAAAGCTAATTTTTTGCAATATATTCTGTTGGTTCAAGTTCAACACACATGGTCTTAATATCTCTGATGTACACAGTGATGTCAGTGATATACCTAAAGAAACCTACAAACTTCTGGAAGACTGTGAACTTCTAATAATGGTATTGACGTTATAACTTTTTCTATATATATATGTGAATTGTTAAAGCATGAGATTATGGGATTCTCTTGAAGCTGCATATTTTCTTATGTTACTTAGTGTTTTTATTAACTTTTTGTATAACTGGATTTAAGCTTGATTTTATTATAATTATGTCCAGGATGCTCTTAGACCCGATCGTTCTTCTTCAACACACTTTGGATTACCACGGGTGGGTAGTTAGTTCTAATATATCAATCAGCTCTAGCTTCTTATTGCTTCACTGTATTCCATGGTGATATATTCTTCACTTCTGCAGGCCCTTGAGGAAGTTAGGAAAATCAAACCAAAGAAAACACTGTTTACTGGTAATCATTTTGAGGCTCGTTTAATGCCTTTACTGAATTAACGCTGCTAGACTTCTTCAGTTTAAACTCTATGTGCACTTTAACTTTTCATGTTAATTTATAAAAACATTAATCACTCTGGAACAGAATGCACAGTTTACTATGAGAAAAGGTACATTGTTCTATTGCATGTTTGAGAAAGCTTATCTGCCTTTCTATTGATTGGCAGAATTTAATCTCAGAAAGGAAAAAAGGGGCAATATACTAAAAAAATGATCTCCTTAGTTAACTGTTCAATAATTTGATACTTCATGTGCACAATAAGCATGATGAGGGTGTCCTACAATCACTCACGCCGAGCTTGCTGTTTGTTTTCCAATGGTGTGTTTGATATTTTCTCCTATTGCTTGTCACATAAAAGAAGAAAATATCTGTATAGTAACTTAGATCTAAATATTCATGTTGGTCACTTTTCAGAACCTTTCAATGTCAGAAGTTAACTATTACTATTCATGTTACTCCAGTTTATTCAGAACTAAAGCATCAAAGTTCGGCTACTTATTTCTTGTTTATGGACACGATAAGAAAAGGTCGTTTAATTTGATCGAATTTCACATGATGTAGCTTTTATTGTTTACATGATGTTGCTCTTGATGACTTGACTGAATGATATCTTCAGGAATGATGCATTTAATGGATCACGAGAAAGTAAACAATGAACTTGCCAAGTTGATGGAGACAGAGGGGCTTGACATCCAGCTGAGCTATGATGGTCTCAGGGTACCTGTATGGCTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030602