BGIOSGA030780

From RiceWiki
Revision as of 09:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030780| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030780, complete gene.| tag = OJ1740_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030780

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030780, complete gene.

LocusTag

OJ1740_D06.42

Ensembl Transcript ID

BGIOSGA030780-TA

Ensembl Protein ID

BGIOSGA030780-PA

Length

5187

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13828101..13833287

Sequence Coding Region

13828101..13828452,13829440..13829699,13829803..13829901,13830438..13830611,13832658..13833287

Genome Context

<gbrowseImage1> name=IndicaChromosome09:13828101..13833287 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:13828101..13833287 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGAAGAACAACAAGAAGCGGAAGAGGGGATCGCCGGCGGCGGCGGCGGATGGGCGAGCACGGCGCTGCAGCCGGTGCGGTGGCTGCGGATGCTGTGCCGGGAGCTGGGCGCGACGTTCGTCGCCGGCGTGGTGCTGGTGTACGGGCTGAGCCAGGGGTTCGCCGGGTCCTTCTTCCGCGTGGCGTCGGACTACTACTGGAAGGACGTGCAGCGGGTGCAGCCGGCCACCGTGCAGCTCCTCTCCGCCGTCTTCTTCATCCCCTGGGTCCTCAAGCCCCTCTGGGGGATCATGACCGACGTCTTCCCCGTCCGCGGCTACCGCCGCCGCCCCTACTTCCTCTTCGCAGGAGTACTTGGAACGGCTTCAGCTGCTATTGTTACCATGGTTAATGGACTACCGATGACTTCCGCTATACTTTCCTTTGTGGGGATATCAACAGCAGTTGCCATAGCAGATGTTACAATAGATGCATGCATTGCGAAGAATGGTATTGATAAGCCATCATTAGTCCCAGACATGCAAAGCCTTTGTGCATTCTCATCATCTCTAGGTGCACTTATTGGGTATGCTACAAGTGGAATGTTTGTCCACCATCTTGGGGCACAGGGTGCATTAGGTGTGATGGCTTTACCTCCTGCAACGTTGGTTTTTCTAGGATTTTTCATATATGAGCTGAAAATGTATCAGCATAATGTGAAAGAGAAGGTTTTGAATAAGGTTCATATGGCAGTGAAAGGGATGGCTCAGACAATAAAGTACCCAGTAGTGTGGAAGCCATCCCTGTACATGTTTCTTTCCCTGGCGCTTAGTATCAGCACTCATGAGGGACAGTTCTACTGGTATACTAGCAAGGAACCACCTAATCCTGGATTTTCTCAGGAATTTGTTGGTATGGTCCATGCCATCGGCGCAGTTGCATCCATGGTGGGCGTCCTGGTGTACCACAAGTACCTCAAGGACTACCCTTTCCGGAGCATCCTCTTCTACGCGCAGCTGCTGTACGGCGTCTCCGGCCTCCTCGACCTCACCTTCGTGCTCCGGTGGAACCTCCTCCTCGGCGTGCCCGACGCCGCCTTCGTCACCCTGGAGGAGTGCTGCGCCCGCGTCGTCGGCCGCGTCAGGCTGATGCCGATGATGGTGCTCAGCACCAAGCTGTGCCCGCCGGGCGCCGAGGGCACCTTCTTCGCGCTGCTCATGTGCATCGACAGCGCCGGCATGCTGGCGGCCAAGGCCGGCGGCGCCGCCGTGCTGCGCGCGCTCCGGGTGACCAGGACCGACTTCGCCCGCCTCTGGCTCGCCGTCCTCGTCAGGAACCTGCTCCGGCTGTCCACGCTCGCCGCCATCTCGCTCGTCCCCACGGCCGACCAGACCGACGTGCTCCTGCCGCGCGACCTCCTCGCCGTCGCCGGCGACGGCTCTCCTCCCGCCGCCGGCGACGGCGACGACGAGGAGAGGCTGCAGCTCGCGAAATTCGCTGATCACGTCGACGACGACGACGACGACGACTGA</cdnaseq>

Protein Sequence

<aaseq>MPEEQQEAEEGIAGGGGGWASTALQPVRWLRMLCRELGATFVAGVVLVYGLSQGFAGSFFRVASDYYWKDVQRVQPATVQLLSAVFFIPWVLKPLWGIMTDVFPVRGYRRRPYFLFAGVLGTASAAIVTMVNGLPMTSAILSFVGISTAVAIADVTIDACIAKNGIDKPSLVPDMQSLCAFSSSLGALIGYATSGMFVHHLGAQGALGVMALPPATLVFLGFFIYELKMYQHNVKEKVLNKVHMAVKGMAQTIKYPVVWKPSLYMFLSLALSISTHEGQFYWYTSKEPPNPGFSQEFVGMVHAIGAVASMVGVLVYHKYLKDYPFRSILFYAQLLYGVSGLLDLTFVLRWNLLLGVPDAAFVTLEECCARVVGRVRLMPMMVLSTKLCPPGAEGTFFALLMCIDSAGMLAAKAGGAAVLRALRVTRTDFARLWLAVLVRNLLRLSTLAAISLVPTADQTDVLLPRDLLAVAGDGSPPAAGDGDDEERLQLAKFADHVDDDDDDD</aaseq>

Gene Sequence

<dnaseqindica>1..352#1340..1599#1703..1801#2338..2511#4558..5187#ATGCCGGAAGAACAACAAGAAGCGGAAGAGGGGATCGCCGGCGGCGGCGGCGGATGGGCGAGCACGGCGCTGCAGCCGGTGCGGTGGCTGCGGATGCTGTGCCGGGAGCTGGGCGCGACGTTCGTCGCCGGCGTGGTGCTGGTGTACGGGCTGAGCCAGGGGTTCGCCGGGTCCTTCTTCCGCGTGGCGTCGGACTACTACTGGAAGGACGTGCAGCGGGTGCAGCCGGCCACCGTGCAGCTCCTCTCCGCCGTCTTCTTCATCCCCTGGGTCCTCAAGCCCCTCTGGGGGATCATGACCGACGTCTTCCCCGTCCGCGGCTACCGCCGCCGCCCCTACTTCCTCTTCGCAGGTCAGCCACTGGAATCCTGCATCTCAAAATGATGAGATTGATGATCTTTAGTTGGCGTGCATAGATAGTAGAGATTAGAGAATCTTATCAGTAGATAGAGTATGCGCACAGTTAAAGAACAAAAAAATTTGTGAAGATTTTAGCAATATGCTTGCTGGTAAGAACATCCTGAATTCCTCCTGTGTCCATAATGTCGTAGAAATTTTAGTTGTGGTGGCATATTTGGTACTCCCTCCGTCCCATAATATAAGAACCTAATCTGGGACCCTAGGTTCTTATATTATGGGACGGAGGGAGTATTTGGTAGGCATAGTAAGTTCTTAAATGATATTTGGGGTCTGATGTGGTGGTAATTGAAAACATAGTGCTAGTTCAGCTTTTTCAAAAGGTTCAGGGGGTTGCTGGGGGTAGAGAATTGATAACACAACGAGTGCTTGGTGATAGTACATACTTTTAGACTTTGTAGAGAGAGGTTGAGTGGAGACTGGAGAGGTAGTTCCAGGCACGAGCAGGAACTGTTTATGCTAGGTATCAGCAGCTCATTGGATGGAATTGGGGATGAAGATGTGTTGGTTCAACTACCATGTGGATTTCGTTTGGGACTTAGGATATTTGATGATATATGCATTGTTTATTGGAGGTCTAGCCAGATCTTAATTAGTAGGTGCAAGATTTGGTGTAAGATGTTATCTTGCCAATTCTTAGAACAATTGAAGTATCAATGTGATGTATCTGTGATATTGCACTTTACAAATTGCTGGGCATGATCATTTTAACAATTCCTTGCTGTAGTAAGTTTTTAAAGTGAGTCTGAGAAAGTAGCAAACATGGAACATGGAGCATAAGCAATTTTCATTTTATTACAGGGAATTAGGGATCAACCAGCATGGTCACATATTGATCAGAAACTTATATGTTACATTTTGTCGATTTCTCCAGCAGTTATAAACTTGACAAATAAATCCCATTTATTTCTGGTGCTGACAGGAGTACTTGGAACGGCTTCAGCTGCTATTGTTACCATGGTTAATGGACTACCGATGACTTCCGCTATACTTTCCTTTGTGGGGATATCAACAGCAGTTGCCATAGCAGATGTTACAATAGATGCATGCATTGCGAAGAATGGTATTGATAAGCCATCATTAGTCCCAGACATGCAAAGCCTTTGTGCATTCTCATCATCTCTAGGTGCACTTATTGGGTATGCTACAAGTGGAATGTTTGTCCACCATCTTGGGGCACAGGTCAATTACAGCCTAAATTCTTGAAGCTTATTGAATTGCCAAGTTCCATTTTTTGGTATGTTGCTTCATTGATAATTTAAATTTTGTATGATTCTTTTTGTAGGGTGCATTAGGTGTGATGGCTTTACCTCCTGCAACGTTGGTTTTTCTAGGATTTTTCATATATGAGCTGAAAATGTATCAGCATAATGTGAAAGAGAAGGTATGCCGAAGTGAAAAGCAATATTGTTCTATCTACTTGTGACAGTTTTATTTGTGTGCATTGAAATTTTGTTCCCTTTACTTGTGACATTTTTTATTTGCCTGCATTGAAATTTTGTTCCATTTAATTATGATATTTTTTTGTTTGCCTGCATTGAAATTTACCAAGTTTTGAATATCAATATATATTTTTGGTGTCTTCATATGGTCGTACAGATAGAGGATGGTTTATCTGATATCGCTGCATGCCACTTGGCTTAGCCAAGCTGAGACGAGTGGCTTGTGTATTGTTCTTCTGAGATGTGTAACATATTAGCAAAGTTCACAATAAAATGAAACTGATGCTTCAGTGACTGAGATTCATCACAGGTCTTGTTAAAGCAACTAAGACCTTTACGAATTGAATCCCAAGTAAACACAGACAGTGAACTCAATAGGCTGTAAAGCATAGGCAGAAACCAAGTATATCTTAATATATGGTATAACAATGAAAGAAATACACAATATATAGTTTCTCACCGAGATGCTAATGTGCAGGTTTTGAATAAGGTTCATATGGCAGTGAAAGGGATGGCTCAGACAATAAAGTACCCAGTAGTGTGGAAGCCATCCCTGTACATGTTTCTTTCCCTGGCGCTTAGTATCAGCACTCATGAGGGACAGTTCTACTGGTATACTAGCAAGGAACCACCTAATCCTGGATTTTCTCAGGTAAATGTTTTTGTTTTTTACCTGCCTGCTTAATCCTATCGCTGATTAGCATATTTGTTGGATAAAAGGCCTAATCCAAGTCCATATTGGAAGTTTGAAACAATAGCACATGGTTTTGGACTGGAAAACCAAGTTTACAATGTGCCCCCAAGTACTCTTCTTTTTGCTCTCAACACTTCTACACATAATACAGAAGTACAAAACACAGGGACATCATAGGCATACAGATGTTCTTTAAAACAGCAACTACCTTCATTTCTTCTCAAGTTCATATCATGTCTTTATGATGCTACCTTTTTTTTTCTCAGGGTTTGTTTATACTTGTCAATAAGATAATACAAGTGAGGTGCAATAGGATATGTTGAATTGGTCCTACACACTAATCACCAATCACTTTCAAGCAACAGAAAATAACACAATCAAGGTATATCAGGAAGGAAACCTAGACAAAAGTGTGCCCTTTCCTTCAAACTGGGAATCTAGTATGCACTCACACGGGTTATGTCCCCACAATCTTGCTTGGTCCACAATGCTGTCCTCACTGTCTGTAACAGATGCCTTATATAAGATAGACTATGTTATCCCAAAAATATTTCTTCACCTTATCTCAGAATCTAAGCCTGGCACATAACAATTAGTCCTAATCTCCATGATCTAAGAGCTTATAATGAATAGATAGTACACAATCTCCATGTTCAAGCGTTACATGGAAACTTTACAATGGCATTGTTCCTTAAAGCTTAGGCAGTCAGGCCCCATTTGGAGAGCTGGGTTTTCTCCAGATTCCTAGACATTTATACAAATATAAAGTCAGGGCATGATGAGTATGTTTTGTGAATAGCGAAAGCAAATGCATAAAGCATCCCTCACAAAGGATAAAAGAAGACTGTTGATCATGAAAAATTCACACTTGTTATAGGGTGAATGGAGATTAGCATCAGTAGTTCAATCCCTTCTGATATAGTAATTATCTTGCTTAATCTAAAGGAATCTGATCTAATCCCTTTCTATCAGACAAGTTCTAAGGGTATCATAAGTGTAAATTAAACAATGAAAAAAGACGCATGTACAAAAAAGATTCTTACAAACAGTTTACAAGTAGTAGTCTGGGATAAGATCAATTGTGGTCATAGTTTACTGCGGCATAATATTTGTTGTCATCTCTTCCCTCCTTTTTTTTTCTTTTTTAATGAACATAAGCTATGTACTTCCTAGTTATACAGAAGCATTCTTAAAATAATTGTATTGATATAATTATCTAAGATCAATAGATCTTCCTTTATCTTAAAAAGACATAAACAGTTTCCACATATTTCTTTTTTCACTTAATCTAACCAGTTTTTGTTAAACAAGTGCTAACTGCTAAGGGCGTCATAAGAGTAAATTAAATTAAACAATGGAAAAGGACGCATGTACAACAAGATTCTTACGAACAGTTTACAAGTAGTAGTTTGGGATAAGATCAATTGTGGTCATAGTTTACTGCTGCCTAATATTTGTTGTCAAAATTTCCCAATTCTTTTTCTTTTTAATAATCATAAGCTATGTGCATCCTACTTATACAGAAATGTTCTTAACGATACGATTATCTAAGATCAATAAAGCTTTCCTTCATCTGAAAAGATACAAACAGCTTACAAAGATTTCTTTTTCGGCTTAATCCAACCGCATTTTGTTAAACAGGTGCTAAGGGTGTCAATAATGGATTGAGATCCTCTGACGTAAAGTCAGTGGAACATGGTGACTGACATGTGGGCCCCACCGCTCTTGGGCCCACCTGTCAGTGACCACGTCCAGGGGCGAAGCCACGTGTGGGGCAACTTGGGCTTGGGCCCCACACGTGGCAAAAATTTTTAATGGAGAAACACTGAAATTTACGTAGAATTCGCACACAAAATTTATAGTTATATGGTTTAGCCCTACTCTTGCTAAAATGCTGCCTCCGCCCCTGACCACGTCAGGGGGTAACTTTACGTCAGAGGATCCGTTTCCGTCAATAATGTTGTCACAAGATTAAAAATAGTACTCATCCCATCGCATATGCAGGAATTTGTTGGTATGGTCCATGCCATCGGCGCAGTTGCATCCATGGTGGGCGTCCTGGTGTACCACAAGTACCTCAAGGACTACCCTTTCCGGAGCATCCTCTTCTACGCGCAGCTGCTGTACGGCGTCTCCGGCCTCCTCGACCTCACCTTCGTGCTCCGGTGGAACCTCCTCCTCGGCGTGCCCGACGCCGCCTTCGTCACCCTGGAGGAGTGCTGCGCCCGCGTCGTCGGCCGCGTCAGGCTGATGCCGATGATGGTGCTCAGCACCAAGCTGTGCCCGCCGGGCGCCGAGGGCACCTTCTTCGCGCTGCTCATGTGCATCGACAGCGCCGGCATGCTGGCGGCCAAGGCCGGCGGCGCCGCCGTGCTGCGCGCGCTCCGGGTGACCAGGACCGACTTCGCCCGCCTCTGGCTCGCCGTCCTCGTCAGGAACCTGCTCCGGCTGTCCACGCTCGCCGCCATCTCGCTCGTCCCCACGGCCGACCAGACCGACGTGCTCCTGCCGCGCGACCTCCTCGCCGTCGCCGGCGACGGCTCTCCTCCCGCCGCCGGCGACGGCGACGACGAGGAGAGGCTGCAGCTCGCGAAATTCGCTGATCACGTCGACGACGACGACGACGACGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030780