BGIOSGA030798

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Revision as of 09:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030798| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030798, complete gene.| tag = OsI_314...")
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Gene Name

BGIOSGA030798

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030798, complete gene.

LocusTag

OsI_31444

Ensembl Transcript ID

BGIOSGA030798-TA

Ensembl Protein ID

BGIOSGA030798-PA

Length

5988

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14049819..14055806

Sequence Coding Region

14049819..14050645,14053353..14055387,14055519..14055806

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14049819..14055806 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14049819..14055806 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAGTCTGGCCCCCAAGCTAGGCGAGCTCCTCATGCAGGAGTACGTCGTGCAGAAGGGCCTGAAGCCCGACATCGAGTCCCTCTCCACGGAGCTTGTGATGATGAACGCCGCCCTCATTGACGTGTCTCGGGTTCCACCAGACCAGCTCAGTGAGGTCGAAAAGCTCTGGGCACGGCAGGTCCGGGAGCTGTCATACGACACGGAGGACGCTGTCGACGACTTCATTCTGCGCGTGGCCGGCTACGATTCTCCAGCTGCCGACGACGCTAATGTCTTCAAGAAGATCATTAGGAAGGCCACCGCCGAAATGAAGAAGGTCAAGAATAGCCACCAGATCTCCGAAAAGGTCAAAGACATAAAGAAACTCTCCAATCACTTGGCTGAGCTCCGTGCCAAGTACACAGTAAGGGGCGTGGGTGCCAATCTAGCCGCAAGCACAGGCATCGACCCCCGAGTCCTCAATCTGTACAAGAACGAGTCGGATCTAGTTGGCATCGAGGAAGCGAGGAACAGAGTAATCAGGATGCTGTTGAAAGGGACCAAAGATCATGCTCATGAATCCGATCAGAGCCTAAAGATAGTGTCTATTGTGGGCATTGGGGGCCTGGGCAAGACTACTCTAGCCAAAACGGTACACGACATGCTTAAAAAAAAAATCTTCGATTGTTCTGCTTTTAATTCTGTTGGTAGGACTCCTAATCTGGCTATGACATTTGAGAAGATGCTAGTGGAACTCGATCAAAAATATAAGGAAGCTGACATGGCAAGATGGGATGTAGAGCGATTCTGCAACGAGCTGCATAAATTCCTACAGCACAAGAGGTACTTCATTGTTGTTGACGACATATGGGATAAAGGATCATGGGAAGCAATCAAATATGCTTTGAAGGATAACAATTGCGGAAGTAGAATAATCATGACTACTCGTAATTTTGAGGTTGTCACAAAAGCAGAAGAGGTTTACAGACTAAAACCTCTGTCTTATGGAAAATCTAAGGAATTGTTCTACAAAAGAATACACAATCAGGAAGGAGAAAGTCTTGATGATCTATCAGGTGAAGTGTCTATTAAAATCATAGATAAATGTGAAGGTGTACCATTGGCTATCATTGCAATAGCTAGTTTATTGGTCGATAAACCATGTGAGGATTGGTCAAAGGTGTATGACTCAATTGGTTTTGGGAATGGGGACAATACAATGAAGATACTGTCATATAGCTACTATGATCTACCTTCTTATCTAAAGCCATGCCTGTTGCATCTAAGCATATTTCCAGAAGATAATATCCTTGATACAAATAGTGTGATTTGGATGTGGATAGGTGAAGGTTTTGTCCATCTTGAGGAAGGGGAGGGTAGCCTATTTGAGGTTGGAGAAAGGTACTACAAGGAGCTTGTAAATAGAAGTATGATCCAACCAACAGAAAACCAATTGTATCCGTTCACACAATGGTTCCGTATTCATGATATCGTGCTTGATCTCATCCGTAAGTTCTTGAAAGATGAAAACTTCTTTACTATTCTAGGCAGCAGCGAGCAACACGCATCTTCGAACAGTTTAAGAAGAGAGAAGAAAACAGGCATGCCTCGTGTGGACAAGGTGCGCCGACTGGCTGTACTAAATCACGATGTGCAGCAAATCTCTAAAGATACCATGAACATGCCAGAGGTGTTGAGGTCACTTAACATTGTAAGTAGTACGATTGAGATTATGGCCCCACTTCATAGCTTCAGAGCTTGCCGTGTGCTATATATACAAGAGAGCAATGTCCCGCCGATCAGCCTAATGCATCTGGGAAGGTTGTTGCATCTCAAGTACTTAGAGATAACTGAAACACATGTTGATGAGCTTCCTAAGGAAATTGGGCACCTGAAGTCTCTTCAGGCGCTGCTATTAATCAATATTGGGTTACACGAGCTGCCGCCGACAGTTTGTTTGCTTACACAGCTGATGTGCCTGATAATTGAGGGTTTCAAAAGGTTGCCAGCTAACAGGATGGGAAACCTAACGTCCCTGGAGGAGCTACGGTTAAAGAGCGTAGTTGGCCAGAGAGCCACCGAGGACCTCGTGGTAGAGCTTGCCAAGCTGACCAGGTTGAGGGTGCTCACGATCACCTTTTCTGAGGAACTAGAGGAGAGCTTGCAAGAAGCATTGGTGCAGTCTCTGTGCAATATGCGGAAACTCCAGGAACTAGTACTTTCTTCTAAAATGTCAGAGCTGCAGGGAGCCACTGTATGGGAAGGTTGGGAGCCACCTAGGCAACTCCGGCGCCTGCTTATACAAGGGATCACCTTCTCACGGCCGCCTGGGTGGGTCAACCGCTCTCATCTGCCATGCCTCTGCTTCTTATCTCTTAACGTGTACGTTGTTGTAGAAGAGGACCTAGATAACCTAGTGAGATTGCCAGAGCTCTGCTACCTCGAGCTAGACAGTTTCAGCTGGCCTCCAGGGTATACTGTTGGTACAGACGGCTTCAAGAATCTGAGGTTCTGCCGTGTGGGCACCGCGTTCAAGATTCATGTGGGTGCCATGCCAAGGCCGGAAGAGCTGCATTTTGGAGTTTTTGCTGGGCATGCGAGGTTTGAAGTAAATAATATGCCGTTGGAGCAGTACCCAACAAAGGATGTAATTGAAGCTCTTGACTTGGGCCTGGATAACCTCCTTTCACTTGAGCAAGTCAGCGTCTTAGTGAACTGCTTGGGTGCTACCACCGCACAAGTGCAGGAGGTGGAGGTTGTCATCAGGCGTGCAGTGAAAAATCATCCCAACCGTCCAACTATAGAAATGGATCGAGTATATGAGGAAGATATGTTGTCAGACGAAGACCAGGAGACTCTGGTGAGCCAATGTGCCGAGCAACACATCGAAGAACTTGTCGATGTGCTCGAGTGGAAGGATAAACCTGATGCTCTCTTCACCAGCCGCCTGATGTCGTACCGACGTCTTCAGGATGCCGTTATCACCATCAACTGTGCGGGTGCCAGTATGTGTGAGGTGGAGAAAGTGGAAGCAGCTGTTAGGCATGCAGCCGAAGTTCATGGTAACCATGCTACTATCCAACTGATCAGGATAAACACCAACGAAATGGTCTCCTCGTCTAACCAAGAGGCAGCCGGCTCTGCGGTTTCGAACGCCCTAGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MASLAPKLGELLMQEYVVQKGLKPDIESLSTELVMMNAALIDVSRVPPDQLSEVEKLWARQVRELSYDTEDAVDDFILRVAGYDSPAADDANVFKKIIRKATAEMKKVKNSHQISEKVKDIKKLSNHLAELRAKYTVRGVGANLAASTGIDPRVLNLYKNESDLVGIEEARNRVIRMLLKGTKDHAHESDQSLKIVSIVGIGGLGKTTLAKTVHDMLKKKIFDCSAFNSVGRTPNLAMTFEKMLVELDQKYKEADMARWDVERFCNELHKFLQHKRYFIVVDDIWDKGSWEAIKYALKDNNCGSRIIMTTRNFEVVTKAEEVYRLKPLSYGKSKELFYKRIHNQEGESLDDLSGEVSIKIIDKCEGVPLAIIAIASLLVDKPCEDWSKVYDSIGFGNGDNTMKILSYSYYDLPSYLKPCLLHLSIFPEDNILDTNSVIWMWIGEGFVHLEEGEGSLFEVGERYYKELVNRSMIQPTENQLYPFTQWFRIHDIVLDLIRKFLKDENFFTILGSSEQHASSNSLRREKKTGMPRVDKVRRLAVLNHDVQQISKDTMNMPEVLRSLNIVSSTIEIMAPLHSFRACRVLYIQESNVPPISLMHLGRLLHLKYLEITETHVDELPKEIGHLKSLQALLLINIGLHELPPTVCLLTQLMCLIIEGFKRLPANRMGNLTSLEELRLKSVVGQRATEDLVVELAKLTRLRVLTITFSEELEESLQEALVQSLCNMRKLQELVLSSKMSELQGATVWEGWEPPRQLRRLLIQGITFSRPPGWVNRSHLPCLCFLSLNVYVVVEEDLDNLVRLPELCYLELDSFSWPPGYTVGTDGFKNLRFCRVGTAFKIHVGAMPRPEELHFGVFAGHARFEVNNMPLEQYPTKDVIEALDLGLDNLLSLEQVSVLVNCLGATTAQVQEVEVVIRRAVKNHPNRPTIEMDRVYEEDMLSDEDQETLVSQCAEQHIEELVDVLEWKDKPDALFTSRLMSYRRLQDAVITINCAGASMCEVEKVEAAVRHAAEVHGNHATIQLIRINTNEMVSSSNQEAAGSAVSNALE</aaseq>

Gene Sequence

<dnaseqindica>1..827#3535..5569#5701..5988#ATGGCCAGTCTGGCCCCCAAGCTAGGCGAGCTCCTCATGCAGGAGTACGTCGTGCAGAAGGGCCTGAAGCCCGACATCGAGTCCCTCTCCACGGAGCTTGTGATGATGAACGCCGCCCTCATTGACGTGTCTCGGGTTCCACCAGACCAGCTCAGTGAGGTCGAAAAGCTCTGGGCACGGCAGGTCCGGGAGCTGTCATACGACACGGAGGACGCTGTCGACGACTTCATTCTGCGCGTGGCCGGCTACGATTCTCCAGCTGCCGACGACGCTAATGTCTTCAAGAAGATCATTAGGAAGGCCACCGCCGAAATGAAGAAGGTCAAGAATAGCCACCAGATCTCCGAAAAGGTCAAAGACATAAAGAAACTCTCCAATCACTTGGCTGAGCTCCGTGCCAAGTACACAGTAAGGGGCGTGGGTGCCAATCTAGCCGCAAGCACAGGCATCGACCCCCGAGTCCTCAATCTGTACAAGAACGAGTCGGATCTAGTTGGCATCGAGGAAGCGAGGAACAGAGTAATCAGGATGCTGTTGAAAGGGACCAAAGATCATGCTCATGAATCCGATCAGAGCCTAAAGATAGTGTCTATTGTGGGCATTGGGGGCCTGGGCAAGACTACTCTAGCCAAAACGGTACACGACATGCTTAAAAAAAAAATCTTCGATTGTTCTGCTTTTAATTCTGTTGGTAGGACTCCTAATCTGGCTATGACATTTGAGAAGATGCTAGTGGAACTCGATCAAAAATATAAGGAAGCTGACATGGCAAGATGGGATGTAGAGCGATTCTGCAACGAGCTGCATAAATTCCTACAGCACAAGAGGTATGTATATGTCATTGAGCTCCGTTCATCTTAGTTTCAAGTTCTCTTCTCGCAAAGTGTGAGCGATTTATATAATCTTAGAGCGCCTGGACAGAACGGATGACGAATATATCATGTAGAACAGTAGAAGCATTAGTGCTGTAGGGAAAATTTCGGTTGATTGGCGGCCCTGATATTTGATTTGTAGCTTTGGATCATTTCTCAGTATGTTCGCAGTCTTATGTCCTTATGTGGATTCTGAATCTTCTGATGATCTTATCTATTTAGCATGTAAGACTTGATTCCGTATATGATTTGGTATAGGGTAGACCCGTTGAGGTTAGTGCACAAGTGTAGGGTATCCTAAACTTAGAATACTGACATTGTTAATAAGGGATAATATGATCTTTTGCCCTTAAGAATAAATGTTTCTCGGGACGTGAGTGATTGGTTTATAGTGGGTATTTCATAGTGCGCTCTTACGTACGCCACTAGGATGCCGGTTTAGAGCCTATGTAGATGAGAATTTTTATAGTAGTAAAGCTAGTGGCAGCTGACAAGCCATAGGCCGGCAGCTGCCTCGCGAGAGTCAGGGAGGCAAGATTTTGCCAAAGTAGATATCTTACTTTACTTCCAATTTTAGACTCGTAAAATATATTCGTTTGTGTTTACTGGATTTAATTAATTTATTGTCTCCACTATACATTTAGACCAAAACATTAAAAGAAAGGGGAAATGCTATACAACGGCATCATGTTCCCATCGCGTGGAACAAGATGCACTCAGCTCCTCCGATCTAAGCGAAGCGATGCATAGGCTGCGCCGATGATAGTGGCTGAGATAGAACTGTTGACGGAGCCAGTGGACGTGGGCTGCGACGGCGGTGCCTGAGATGGAGCTGTCATCAGAGTGGTCGGACCAGGAGTTGGAGCCGACGAACGGAGGTTGCGGCAGTGGTGCAGCAACAGCCGGGATGAAGCTATACAGGGTTTTAAATTTCGAAATCAGCATTTCTGCCGCAGCTGAGCGATAGAACTGAAATTTCCAAAATTTTGAAAAAAATTCGTACAAAATTTTTTGATTTTTTGATGGATTTTGAATAAAATTTGACCAAATTCATAAAAACTTGTAAAAGATTGAAATTTTCGGGCAAGATGTTAGCATTTCGGTTGGGGGGCGAAATTTCCGAAATTTCAAACACTGGAGCTATAAGCCTATAACCGAAGTGGTCGGGCGTAGAGTCGGAGCTGACCGACGTGAGCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGAGCTATCGCCGGAGTGGTTGGACATGGAGTCGATGTAGTGTGGACGTGGGCTGCGTGGGTACGTCACCTGTGTGCTAATACTTTCGGCGTCAACTCCGCATGCTACTTTCCACCTTCAAGTAGCTAGCAAAAACATTATGTCTTCCTCCAATCTATACTTCCTCCATTCCACAAAAAGTAGGTTTGGGTTCTTTGGACGGAGGGAGTACTATGTAGGAACAGAAAATTCCAGCAACAACAGAATAAGTACATGTATGGCATAGCTCCAGCTCCAGCTCCAGCTCCACCTCTCCTGGAGCTGGAGCTCAGCCAAACAGTTTTAGCTCCACCTAAAACGGGAGCGGAGCTGGGTGGAGCTCTCTCACAAAATGAACTAGAGAGGTGGAGCTGGGTTTAGGCGGCTCCATAACTTCACTCCAAACCCAACTCTTGGAGCTAAATTTAGGAGTTAGAGCTCTACCAAACAGGCCCTAAGTGTAATCGTCGTCCTCGAGATCATAGTGTCTTAAGTGTAATCGTCGTCCTCGAGATCATAGTGTCTACAGACAGTTAGAACTCAACAAGCCTATTCTTATCTTCACTAACCTTCGGCAATAGGTGTATCATCCATATGAATGATCCTCCCCGGCAACCTCGCCGCACCATCGGGAGGCACGTCGTTATTGCAGGAGGAGTGTAGAATGGGTCAAGGGGAGAAGGAAACAGTATCAGCCTGATACCGACGAGGTATCGGTATGGTACCAACAGGTATCAACTAATGGCTGGTACTGATGAGATATCAGCTTGGTATCTATCAGGTATCAAACTAGTTCTAGCGAGAATCAAATGGTACCTAACAAGTATCAGCATGGATTGATGGGTATCAGTTGGTACCTAACAAGTATCAGCTGATATGTACGGAGTTTCAATCGGTACGTACCTATGAGGTACCAAATCTAATATTGATCGCTATCAATGCAAAATCTGATACCTGCTAGGTATCATACCGTTCACACTGTAGCTGTCATCCTAGAGGATTTCCATAGCTGTGTGGTGCATTAGCATTCCTCCTCTCATATCGCGCAATTTATACTCGTGGACTATAATGTGCCACATCGAACATCTAGAAAAATCTCTAGGATTTCCAAAATAATAGGTTGTGTGTTTAGATTTTACACAAGTTAAATTAACAGAAAGTCGCTAAGATGACTTCAGCAATCAATGTTGCCGGATTTGAGAAATTATAAGAGTGCAAGCCTTATAAGCTATAAGATAATGAGATGTATCATGTATGCGTTTTGAAAACCCCTCTCCCTTGGAGTGGCTCGCAATTTTCCCTTGCTAGAATCTTGATGTTGTTGCATCTGATTTATATACATACTCTACACAAATTTATTCTTATATAACTCTACATTGTTGCATTGATTATAGGTACTTCATTGTTGTTGACGACATATGGGATAAAGGATCATGGGAAGCAATCAAATATGCTTTGAAGGATAACAATTGCGGAAGTAGAATAATCATGACTACTCGTAATTTTGAGGTTGTCACAAAAGCAGAAGAGGTTTACAGACTAAAACCTCTGTCTTATGGAAAATCTAAGGAATTGTTCTACAAAAGAATACACAATCAGGAAGGAGAAAGTCTTGATGATCTATCAGGTGAAGTGTCTATTAAAATCATAGATAAATGTGAAGGTGTACCATTGGCTATCATTGCAATAGCTAGTTTATTGGTCGATAAACCATGTGAGGATTGGTCAAAGGTGTATGACTCAATTGGTTTTGGGAATGGGGACAATACAATGAAGATACTGTCATATAGCTACTATGATCTACCTTCTTATCTAAAGCCATGCCTGTTGCATCTAAGCATATTTCCAGAAGATAATATCCTTGATACAAATAGTGTGATTTGGATGTGGATAGGTGAAGGTTTTGTCCATCTTGAGGAAGGGGAGGGTAGCCTATTTGAGGTTGGAGAAAGGTACTACAAGGAGCTTGTAAATAGAAGTATGATCCAACCAACAGAAAACCAATTGTATCCGTTCACACAATGGTTCCGTATTCATGATATCGTGCTTGATCTCATCCGTAAGTTCTTGAAAGATGAAAACTTCTTTACTATTCTAGGCAGCAGCGAGCAACACGCATCTTCGAACAGTTTAAGAAGAGAGAAGAAAACAGGCATGCCTCGTGTGGACAAGGTGCGCCGACTGGCTGTACTAAATCACGATGTGCAGCAAATCTCTAAAGATACCATGAACATGCCAGAGGTGTTGAGGTCACTTAACATTGTAAGTAGTACGATTGAGATTATGGCCCCACTTCATAGCTTCAGAGCTTGCCGTGTGCTATATATACAAGAGAGCAATGTCCCGCCGATCAGCCTAATGCATCTGGGAAGGTTGTTGCATCTCAAGTACTTAGAGATAACTGAAACACATGTTGATGAGCTTCCTAAGGAAATTGGGCACCTGAAGTCTCTTCAGGCGCTGCTATTAATCAATATTGGGTTACACGAGCTGCCGCCGACAGTTTGTTTGCTTACACAGCTGATGTGCCTGATAATTGAGGGTTTCAAAAGGTTGCCAGCTAACAGGATGGGAAACCTAACGTCCCTGGAGGAGCTACGGTTAAAGAGCGTAGTTGGCCAGAGAGCCACCGAGGACCTCGTGGTAGAGCTTGCCAAGCTGACCAGGTTGAGGGTGCTCACGATCACCTTTTCTGAGGAACTAGAGGAGAGCTTGCAAGAAGCATTGGTGCAGTCTCTGTGCAATATGCGGAAACTCCAGGAACTAGTACTTTCTTCTAAAATGTCAGAGCTGCAGGGAGCCACTGTATGGGAAGGTTGGGAGCCACCTAGGCAACTCCGGCGCCTGCTTATACAAGGGATCACCTTCTCACGGCCGCCTGGGTGGGTCAACCGCTCTCATCTGCCATGCCTCTGCTTCTTATCTCTTAACGTGTACGTTGTTGTAGAAGAGGACCTAGATAACCTAGTGAGATTGCCAGAGCTCTGCTACCTCGAGCTAGACAGTTTCAGCTGGCCTCCAGGGTATACTGTTGGTACAGACGGCTTCAAGAATCTGAGGTTCTGCCGTGTGGGCACCGCGTTCAAGATTCATGTGGGTGCCATGCCAAGGCCGGAAGAGCTGCATTTTGGAGTTTTTGCTGGGCATGCGAGGTTTGAAGTAAATAATATGCCGTTGGAGCAGTACCCAACAAAGGATGTAATTGAAGCTCTTGACTTGGGCCTGGATAACCTCCTTTCACTTGAGCAAGTCAGCGTCTTAGTGAACTGCTTGGGTGCTACCACCGCACAAGTGCAGGAGGTGGAGGTTGTCATCAGGCGTGCAGTGAAAAATCATCCCAACCGTCCAACTATAGAAATGGATCGAGTATATGAGGAAGATATGTTGTCAGACGAAGACCAGGAGACTCTGGTGAGCCAATGTGCCGAGGTATGTGTCTTTATTTTTTTCAGCCTGTCAATGAATACGTTTAATTACAATATGTTACTACCATATATATGTTCGTGAGTGCTGCTAATTGACATATACTGCATTCTGCTCCTCGCAATTCTCAATTTCAGCAACACATCGAAGAACTTGTCGATGTGCTCGAGTGGAAGGATAAACCTGATGCTCTCTTCACCAGCCGCCTGATGTCGTACCGACGTCTTCAGGATGCCGTTATCACCATCAACTGTGCGGGTGCCAGTATGTGTGAGGTGGAGAAAGTGGAAGCAGCTGTTAGGCATGCAGCCGAAGTTCATGGTAACCATGCTACTATCCAACTGATCAGGATAAACACCAACGAAATGGTCTCCTCGTCTAACCAAGAGGCAGCCGGCTCTGCGGTTTCGAACGCCCTAGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030798