BGIOSGA030880

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Revision as of 09:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030880| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030880, complete gene.| tag = OsJ_295...")
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Gene Name

BGIOSGA030880

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030880, complete gene.

LocusTag

OsJ_29589

Ensembl Transcript ID

BGIOSGA030880-TA

Ensembl Protein ID

BGIOSGA030880-PA

Length

4551

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15588687..15593237

Sequence Coding Region

15588687..15588812,15588916..15589074,15590186..15590299,15590901..15591082,15591342..15591441
,15591798..15591839,15592019..15592195,15592285..15592430,15592834..15592980
,15593063..15593237

Genome Context

<gbrowseImage1> name=IndicaChromosome09:15588687..15593237 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:15588687..15593237 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCCCCGCGGTCGCCGCCGCCCTCCTCCTCGTCGCCGCCGCCGTCGCGGCCTCGCCGGTTTCCGCCCTCTACTCCGCCGGCTCTCCCGTCCTCCAGTTCAACCCCAACAACTTCAAATCCAAGGTGCTGAACTCGAATGGGGTGGTGCTGGTGGAGTTCTTCGCGCCGTGGTGCGGGCACTGCCAGCAGCTGACGCCGATTTGGGAGAAGGCCGCGGGCGTCCTCAAGGGCGTCGCCACGGTCGCCGCGCTCGACGCCGACGCGCACAAGGAGCTCGCGCAGGAATATGGAATAAGAGGATTTCCAACTATTAAGGTGTTTGTTCCTGGAAAGCCTCCAGTAGATTATCAAGGAGCAAGAGATGTAAAGCCAATTGTTGAATTTGCTCTTTCACAGGTCAAGGCTCTTCTTAGAGATCGGTTGAATGGAAAGACATCAGCAGGTTCAGGTGGCAAGAAATCAGGTGGTTCAAGTGAGAAAACTGAACCAAGTGCGTCAATAGAATTAAATTCTCAAAACTTCGATAAACTTGTCACCAAAAGCAAGGATCTTTGGATTGTTGAGTTCTTTGCACCATGGTGTGGGCACTGCAAGAAATTGGCACCTGAATGGAAAAAGGCTGCAAAGAACTTGAAGGGCCAAGTGAAGCTAGGTCATGTGGATTGTGATGCTGAAAAGAATACTAATTCAAGTGTTTGGTCAGTTGATAAAAGTTACCGATCTTTGATGAGCAAGTACAAGGTAGAAGGCTTTCCTACTATTTTGGTATTTGGTGCCGATAAGGAGAGCCCATTCCCTTACCAGGGGGCTAGAGTTGCCTCTGCTATCGAGTCCTTTGCATTGGAGCAGTTGGAAGCCAATGCTGCTCCACCTGAAGTTTCTGAGTTGACTGGCCCAGACGCCATGGAAGAGAAATGTGCTTCTGCTGCCATTTGCTTTGTATCTTTCCTTCCAGATATCTTGGATTCAAAGGCCGAAGGAAGAAACAAGTACCTTGAGCTGCTATTATCTGTTGCTGAGAAATTTAAAAGGAGTCCATACAGTTTTGTCTGGACAGCTGCTGGGAAGCAAGCTGATCTTGAGAAGCAAGTTGGAGTTGGTGGTTATGGCTATCCAGCGATGGTTGCTCTCAACGTGAAAAAAGGCGCATATGCTCCACTCCGTAGTGCTTTCCAGCTTGATGAAATAACTGAGTTTGTGAAGGAAGCAGGGCGCGGTGGGAAGGGTAATCTTCCTTTGGACGGTACCCCAACGATAGTCCAATCTGAACCATGGGACGGCAAAGATGGTGAGGTTATTGAAGAGGACGAATTCTCCCTTGAGGAGCTGATGGCCGACAACTCTCCAGTAAATGACGAGTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MRPAVAAALLLVAAAVAASPVSALYSAGSPVLQFNPNNFKSKVLNSNGVVLVEFFAPWCGHCQQLTPIWEKAAGVLKGVATVAALDADAHKELAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIVEFALSQVKALLRDRLNGKTSAGSGGKKSGGSSEKTEPSASIELNSQNFDKLVTKSKDLWIVEFFAPWCGHCKKLAPEWKKAAKNLKGQVKLGHVDCDAEKNTNSSVWSVDKSYRSLMSKYKVEGFPTILVFGADKESPFPYQGARVASAIESFALEQLEANAAPPEVSELTGPDAMEEKCASAAICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKRSPYSFVWTAAGKQADLEKQVGVGGYGYPAMVALNVKKGAYAPLRSAFQLDEITEFVKEAGRGGKGNLPLDGTPTIVQSEPWDGKDGEVIEEDEFSLEELMADNSPVNDEL</aaseq>

Gene Sequence

<dnaseqindica>1..126#230..388#1500..1613#2215..2396#2656..2755#3112..3153#3333..3509#3599..3744#4148..4294#4377..4551#ATGCGCCCCGCGGTCGCCGCCGCCCTCCTCCTCGTCGCCGCCGCCGTCGCGGCCTCGCCGGTTTCCGCCCTCTACTCCGCCGGCTCTCCCGTCCTCCAGTTCAACCCCAACAACTTCAAATCCAAGGTCTCTCGATCGACTCCCCCCTCACACTCTTCCCTTCCGTCTCCGGATCGGCTTCCCTTACTTGGGGGCTCTCGCTGAGTTCGAATTTCGGTTGGGGGTGCAGGTGCTGAACTCGAATGGGGTGGTGCTGGTGGAGTTCTTCGCGCCGTGGTGCGGGCACTGCCAGCAGCTGACGCCGATTTGGGAGAAGGCCGCGGGCGTCCTCAAGGGCGTCGCCACGGTCGCCGCGCTCGACGCCGACGCGCACAAGGAGCTCGCGCAGGTGAGCAAACGTCCTGTTTGGCATCTCGGTTCATTGGGATTGGCTGATCTACCTTTTCCTGGTGTGATCTGATCTCTGCATCAGTTGTTGCGTCAACGTAATTTGATCGAGCTAGGACATAACTGCGTATATGCAATGTGCAAACTCGACTCCATAAAAAAAAAGTTACACCTGTTATGGGTTTTTTGTGTAGCTCTCAGTATCAGAGAGTACAATGCCACATTTGTTTGGTGGAGGAAATATGGGAAGATCAATGTTTGGTGTCTACACGTACTGATCAAAAAGGGGCGTCGTTTTTATTTTTTAAAGGAGGGCATTAACATCGGATATGAGTTATACAATACCGAATTAATGCATATTAAAATGCTGTAGCTGGGATTAATATTGATGGAATGTGGTGCATTGTTGATTTCATACAGTAAATTTATTTATTTTTTCACTTTTTCAGCATGGTGATTGGATGCTGTTCTCTTTTTTAAAAAAAAAATAACCTGGATTTTGAATTATATTGAACGAATTAAGCATTTTAATTGGTGTTAATTAGGGTTTTATCTGTTTTTCTTTTGATCCGAAGGTGAGAGCGGCCTTGGTTAGTTTATTGCCAATAAAAGTGTATATGTGACTTTAGATGTGGGAAATGCATACTTTTATGAAGGACGAAACCGTGGAAGCCAATGGGTTGTGCAACTTTACAATATCTGATGCAACATTGTTTATTGGTGAATCAGAAAATTAGGTTATGTATCCCAGATTCTCTAACTGAAAATTTAGTCACTCATCAAATGAAATAAAGGCATCTATCCTGAGAGAAGGCAAGCAAGAGTGAAAGATAGTTATGTACCTTTGCCATTGTACCTGCAGTGCGGTGATTTTGAGTCTCTGTCATATTTAGACATATATTTTTTTTTACAGTAATTTTACAGTATCATGCTTATTGACCAAGAGGCATTTTTTAGCTACGTTATATCTTTGTTTTGGTGAGTATTAGTCTTCTGTCTAGGCTAAATCAATGAAAACTGCACATTAGAACGTCTTCCACCATTGCCATTTGTAAATATTTTGACTGGATGCTATCAAGTTTTTCCTGATGCATGATGCCTTTGTTCTGCAGGAATATGGAATAAGAGGATTTCCAACTATTAAGGTGTTTGTTCCTGGAAAGCCTCCAGTAGATTATCAAGGAGCAAGAGATGTAAAGCCAATTGTTGAATTTGCTCTTTCACAGGTTTGTTGCAGCTTGCCCTATTTGATATATATAAAAATGATATGTTGTTTTTACTTTTATTGCTCCTGTTCTATCTGCCACTCCACTAGTGTATACAACTACAAATCCTTTTCTGAAGATGTTAAGTGCTTCCTGGATTTTCACAGACCAAACTTATTCAGATTGCAATTGTCAGCTGAATGTTGACATAAATAACTTTTATCTTAACATGAAGTATTACTAGGGGGGGAAAACAACAGATATCATATATCAACTGATACTAATGTCCTAGGTAGCTAATTGATTTTGCTATATATCTCCCTCAAATGCTAAACCTTTCAAACTTATCAACTTTTTATATGGGATACTGGATATGAGGTGATGCAGTGATGCTTCTCAGTTCTTACCATGGTGGAGCTTTATGTACCTGCTCTTGCACAGCTGGTGCTTCTGGTAGCGCCCATGATTTTCGTTAAAAAATACACTGTCTGTCGCTGCTGTGTTACAGTGGGTTGCCATTTTACCTTTTTTTTTTTTTGGGTATTTCTCTGTAAAAAATTTCAGCCTTGTGACACACGATATGAGTTTCCACTTTTAAATACAATGAATCTGTATCCTACAGGTCAAGGCTCTTCTTAGAGATCGGTTGAATGGAAAGACATCAGCAGGTTCAGGTGGCAAGAAATCAGGTGGTTCAAGTGAGAAAACTGAACCAAGTGCGTCAATAGAATTAAATTCTCAAAACTTCGATAAACTTGTCACCAAAAGCAAGGATCTTTGGATTGTTGAGTTCTTTGCACCATGGTATGTGGCTTAATGCATTTATGGTTTTCATGTTGACTGATTTATTCTTTACTGTTGTTTCTGAACTTAATTCTGAATCCAAAAGTAGAGAAGGAAAGTGAAGAAAAACACAAAATTTCATACAATTTAGTCACATGTTAGTATTGTAGTGTGTACATTTTAGATCATTGCCCTTAAGATTATGTTGTTCAAGATAATAAGTAAATCCTGTTAACTGAAGACATTATTTGACTCATTAACTGTACTGGTCTTTTGTAAGGTGTGGGCACTGCAAGAAATTGGCACCTGAATGGAAAAAGGCTGCAAAGAACTTGAAGGGCCAAGTGAAGCTAGGTCATGTGGATTGTGATGCTGAAAAGGTTCTTGCCCTTTTTCTATTTGGTCATAAGTTTTTGTTGTATGTGCATTTCTTGTTTGCAAATAATTTATACAAAATTATAAACTGAAATTTGACAATGCATTGGATATTTCATCAATTCAAAGGACTTTGATAAAGGTATTGTAAAATAAAATTAAACTGAGGGTTAGCACTCTAGTTTATAGGGACACAATCAGGATATGCATAGGAAAGTACAAAATGCTGTATCAAGGAAAGCAATGGCCTAACTTTATCCTAAGGCATTTGTTTGGGATCTTATTTTGTGCTGTTTTAGGTTGTCTCTTTAACAGTTTAACATGATGTACTATGATTGAAGTTTTATGTTTTTTTTTCTAGAATACTAATTCAAGTGTTTGGTCAGTTGATAAAAGTTACCGAGTGAGTCTAAATGAACTTAGGCAGAAAATTCAGGCAGTGTATCAGTATATTTATAAAACACAGTTAATGTTTGACCTTTTTAAAGCATTCATGTGCGTTCTGTACAACATTTGTCAAACTATACAACCTAGTTTTCAAGTACCACTTATGTAACATAACGTGTGACTTGAATTTTGCAGTCTTTGATGAGCAAGTACAAGGTAGAAGGCTTTCCTACTATTTTGGTATTTGGTGCCGATAAGGAGAGCCCATTCCCTTACCAGGGGGCTAGAGTTGCCTCTGCTATCGAGTCCTTTGCATTGGAGCAGTTGGAAGCCAATGCTGCTCCACCTGAAGTTTCTGAGTTGACTGGCCCAGTAAGTTTTCGTGATATTAACAAAGTTATCCTTTTGTGGAGACAATGGTCTGGGATTGATGTTTTGACGAGGTGGTTTGGCTTCTGTAGGACGCCATGGAAGAGAAATGTGCTTCTGCTGCCATTTGCTTTGTATCTTTCCTTCCAGATATCTTGGATTCAAAGGCCGAAGGAAGAAACAAGTACCTTGAGCTGCTATTATCTGTTGCTGAGAAATTTAAAAGGAGTCCATACAGGCAAGATTCAACTAAACTTGTTGTGGACTTTATACCATTCTACCTATCATTCCTTGTCTTGTTATGTCTTTTGAGATAAAAAAATCCACAGTTAAATTGATACATTAATTTCCTTTTGCTATTGAATATTGATTGACAAAAAGATTGATAGTAACCTTCATATATTTGAAACACCTTAAAAGAATTAAATGACTTAGTTCGATAATGTTATATGCCAAGGCGTGTATACTATAAGCTCTAAACATAATGGAGATTTTATATATTATATATGCAAATCTGCCATGTGACTGAGTTCTATGTTGAGAAGTTTCCTCAGACAAATCCATTCACTTAGTTAATGCCTTGAAATCTCTTCCGTTTCTTGAGAAAGTCATTCTGAGCTAGAAAAAGCATTGTCTTGCAGTTTTGTCTGGACAGCTGCTGGGAAGCAAGCTGATCTTGAGAAGCAAGTTGGAGTTGGTGGTTATGGCTATCCAGCGATGGTTGCTCTCAACGTGAAAAAAGGCGCATATGCTCCACTCCGTAGTGCTTTCCAGCTTGATGAAATAACGTAAGTTCCTTGTGCATAGAAAATTAATTGCTGCTTAAGGTTCATTTGCCAGATGTTTGATGACAAAACCGGTCTCCTGCAGTGAGTTTGTGAAGGAAGCAGGGCGCGGTGGGAAGGGTAATCTTCCTTTGGACGGTACCCCAACGATAGTCCAATCTGAACCATGGGACGGCAAAGATGGTGAGGTTATTGAAGAGGACGAATTCTCCCTTGAGGAGCTGATGGCCGACAACTCTCCAGTAAATGACGAGTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030880