BGIOSGA030898

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Revision as of 09:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030898| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030898, complete gene.| tag = B1342C0...")
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Gene Name

BGIOSGA030898

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030898, complete gene.

LocusTag

B1342C04.25

Ensembl Transcript ID

BGIOSGA030898-TA

Ensembl Protein ID

BGIOSGA030898-PA

Length

3527

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15823999..15827525

Sequence Coding Region

15823999..15824217,15824812..15824893,15825001..15825126,15825208..15825993,15826306..15826657
,15827030..15827111,15827319..15827525

Genome Context

<gbrowseImage1> name=IndicaChromosome09:15823999..15827525 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:15823999..15827525 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGTGTGTTGGTGGTGGTGACACCCCGTTGGGGTTTCGGGGCGTCGTGGAGGAGGAGCTAGAGGAGGAGGTGGCGGCGGTGTCAGCGTCGGGGAGGCCAATGCAGCGGCAGCGGCGGCGGCGGCGGCGGTGGGGAGAGGATGCCGACGATGGCTACTCGGCGAGCTCGACTGGCGGCGGCGGGAGCAGCGGATGCGGCTCCTTCGGCTGTGACTCGCCTTTGGCTGGGTTCGTGCGTGCTGATGGCGACCCGGACACAGATCTGGAGACAGATGGGGTGGCCACTCCATCCTCCAATGCCTCTGCAGCATTCGCCGAGCCACACGACGAGGAGGAGGGGGACGAGGTGTTGTGTGGGGTGGTGGAAGGGGACTGGGCACAGCTGCAAGAACCAACCAAGAGTCCGGCAGACCGTACCACCGGAGAATGCCTGTACCAGCGGCGCCGGTCAGAAGCTGTTCTTTTGCAGGGTAGGAAGGGGTTGAAGCAACGGCCAGCCTCTCTGGACTTTGGCAGCGGCAGCCCCGGGTTCAATGGAGCCCCTCTTTCTCCGGGCTTTGTGGTTGGGGGTGTGGGTTTGATGAACAAGGGTCTTGTGTCATCATCATTCATCAGATCAGACGTTTTTCCTAGTCCCAGGACACCGAACTATCGACGGCATCGTTCATCAGTATTTGGTTACCAAAAGGGGTGGAGCTCTGAGAGAGTACCGCTTGCTTCCAAAGGTAACAGGAGGTACCCAGGCAGCAGCATGGCATTTCCCTTCAGCAATGGGAGGACATTGCCCTCCAAATGGGAGGATGCAGAGAGATGGATCTTCAGTCCGAATTCGAGTGACGTGCTCGAGAAGACTTCATTTGCTCCTGCTCGGCGACCAAAGTCCAAAAGTGGTCCATTAGGGCCTCCTGGAAAATTTGGTGGACAATACTCATCTGTGTCATTGCTTGACAATGGGAGAGTTGGACATTTGACAGCAAACTCGCCTTTCTTGGCTGGAGTACTGATACCAGAACATTATTGTGGAGAGAAAGATAACATTGGGAGGTATATGAGCAGAACATCTGGTGAGGAGGCCAGCATTGGCATTGGAGGCAAGTCTTGTCTGGCAAATGGTGGGTCTCATGCTACTCAATATAACAGAGTTCGTCGACGACTGGATACTGCGATTGAGTCATCACCTTCATTGCCTAGCACCCAAGCGTCTGTACAAGATGAACAGGTTGGAATCACAGAAGATTCAGCCTCCATTATCACCCCTATAATTTTGCGGAAGGATGCGGCAACTCAAACAAGCCCAAATCTAAGTCGGTCATCTTCGCCCAGTGTCAGTACTCCATTTATCCATTTGCTTACGACACACCAAGTCAGAGAAAAGGAGAATTGTTTCTCTGATGTTATCAGGGATGTGCACATGGACGATCGAGTGACTCTTACCAGGTGGTCCAAGAAACATGTTACACGAGCATCTAGCAAGAACTCAACAAATGTTATAGATGTGAAGAAAAAGACAGTGGAGTCTAAGTCTTCTTCCTGGGAATTAACAGAAGCAAAATCCATATCAAAGGTTGAGCGAGAGCAAGAAAAAATTACTGCTTGGGAACACCTCCAAAAAGCCAAGGCTGAGGCAGCAATCCAAAAGTTAGTGATGAAAATCGAGAAAAAGAGATCATCTTCACTGGACAAGATTTGGAACACCCTCAGGTCTGCACAAAGAAGAGCACAGGTAATGCGTGAAACTGCAGCAGCAAACCAGGATGAGCAATCTTCCGGGAAGGCTAAAAGGACATCACACCTTAATAAGAACGGCCAGATCAGCTCTCTGAGTGGCTGCTTCACTTGCCATGCCTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MRCVGGGDTPLGFRGVVEEELEEEVAAVSASGRPMQRQRRRRRRWGEDADDGYSASSTGGGGSSGCGSFGCDSPLAGFVRADGDPDTDLETDGVATPSSNASAAFAEPHDEEEGDEVLCGVVEGDWAQLQEPTKSPADRTTGECLYQRRRSEAVLLQGRKGLKQRPASLDFGSGSPGFNGAPLSPGFVVGGVGLMNKGLVSSSFIRSDVFPSPRTPNYRRHRSSVFGYQKGWSSERVPLASKGNRRYPGSSMAFPFSNGRTLPSKWEDAERWIFSPNSSDVLEKTSFAPARRPKSKSGPLGPPGKFGGQYSSVSLLDNGRVGHLTANSPFLAGVLIPEHYCGEKDNIGRYMSRTSGEEASIGIGGKSCLANGGSHATQYNRVRRRLDTAIESSPSLPSTQASVQDEQVGITEDSASIITPIILRKDAATQTSPNLSRSSSPSVSTPFIHLLTTHQVREKENCFSDVIRDVHMDDRVTLTRWSKKHVTRASSKNSTNVIDVKKKTVESKSSSWELTEAKSISKVEREQEKITAWEHLQKAKAEAAIQKLVMKIEKKRSSSLDKIWNTLRSAQRRAQVMRETAAANQDEQSSGKAKRTSHLNKNGQISSLSGCFTCHAF</aaseq>

Gene Sequence

<dnaseqindica>1..219#814..895#1003..1128#1210..1995#2308..2659#3032..3113#3321..3527#ATGCGGTGTGTTGGTGGTGGTGACACCCCGTTGGGGTTTCGGGGCGTCGTGGAGGAGGAGCTAGAGGAGGAGGTGGCGGCGGTGTCAGCGTCGGGGAGGCCAATGCAGCGGCAGCGGCGGCGGCGGCGGCGGTGGGGAGAGGATGCCGACGATGGCTACTCGGCGAGCTCGACTGGCGGCGGCGGGAGCAGCGGATGCGGCTCCTTCGGCTGTGACTCGGTTCGTCTTGCTCCCTGCATCGCTAGTACTACTTTTTTTGTTGATTTCCTTTAGCATTAGTCATGGGCGATTTCTTTCTTTTTCTTGGGCACCAAACTCTGCAATTTGCGCCATGAGGAAGAAAAAGATTGTTAATTTTGAGATGCTATTCACCTCAGTTAAGGAAAAGATTTAACTTTACAGGGTGGTTGTTGCCACTTGCCAATGTGCCACGCAGATCTCAGTAGCAGATAGCTTTTCTCAGGTGACAGCAAGTTCGCAACAACGCGTTTAGATGCGATAGTATAATCAAGAAACACCATGCTAAGTAAACTGCAAAATCTTTATAAATAACTAGCGAAATGCCTAGTTGGTAATTCTAGCAATTGAGACAAAGCAGGAGGGCCCAGACCTTTTTAAGACAGTAGGAATCAATGCATCATCGTCACCATCTTGGATCCTTAGCAAGAGGAGAAAGGAGGGTGCTTTTTTCCTTGACATGAGAAAATGGGGGCTCTGTTGCCTGTTGGATTCTCTTCACCTTTGTTCTCTGTTTGAGAATTAGTAGGTACTAGCTTTTATGATCAGTGAGGCTAAGCTGATGGTTGGTTGCAGCCTTTGGCTGGGTTCGTGCGTGCTGATGGCGACCCGGACACAGATCTGGAGACAGATGGGGTGGCCACTCCATCCTCCAATGGTGAGCACAATGCTGTTCACAGCTCACAGTTTGTATTCTTGCCAGTGTTCTTGCTCGGTTGGAGCGCAACTTTACAGCCCTTAAAAGGAGTTCTGTTCTCGCTGAAGCCTCTGCAGCATTCGCCGAGCCACACGACGAGGAGGAGGGGGACGAGGTGTTGTGTGGGGTGGTGGAAGGGGACTGGGCACAGCTGCAAGAACCAACCAAGAGTCCGGCAGACCGTACCACCGGAGGTACGAATTCTGAAACTTTGCATGGAAAAATTTAGATGGTACCCGGTTGTTCATTTTGTATGCTTGTGTGGTGCTCGACAGAATGCCTGTACCAGCGGCGCCGGTCAGAAGCTGTTCTTTTGCAGGGTAGGAAGGGGTTGAAGCAACGGCCAGCCTCTCTGGACTTTGGCAGCGGCAGCCCCGGGTTCAATGGAGCCCCTCTTTCTCCGGGCTTTGTGGTTGGGGGTGTGGGTTTGATGAACAAGGGTCTTGTGTCATCATCATTCATCAGATCAGACGTTTTTCCTAGTCCCAGGACACCGAACTATCGACGGCATCGTTCATCAGTATTTGGTTACCAAAAGGGGTGGAGCTCTGAGAGAGTACCGCTTGCTTCCAAAGGTAACAGGAGGTACCCAGGCAGCAGCATGGCATTTCCCTTCAGCAATGGGAGGACATTGCCCTCCAAATGGGAGGATGCAGAGAGATGGATCTTCAGTCCGAATTCGAGTGACGTGCTCGAGAAGACTTCATTTGCTCCTGCTCGGCGACCAAAGTCCAAAAGTGGTCCATTAGGGCCTCCTGGAAAATTTGGTGGACAATACTCATCTGTGTCATTGCTTGACAATGGGAGAGTTGGACATTTGACAGCAAACTCGCCTTTCTTGGCTGGAGTACTGATACCAGAACATTATTGTGGAGAGAAAGATAACATTGGGAGGTATATGAGCAGAACATCTGGTGAGGAGGCCAGCATTGGCATTGGAGGCAAGTCTTGTCTGGCAAATGGTGGGTCTCATGCTACTCAATATAACAGAGTTCGTCGACGACTGGATACTGCGATTGAGTCATCACCTTCATTGCCTAGCACCCAAGCGTCTGTACAAGGTATTATAAATTATTCTCGTTTGCAATTCATTCCTTTTCTGCCTGCCTTTCAGTTTTGAGTTGATCCATAATTGTTCTGAAGGCAGCCTGGTGTTTTGAGGTATCCTCTCTATTTGCCAAAGCATCTCAATACTGTGGAGTTTCTCATGGCCTTGCCACTGTAAATGATGTTTTTTTTTGTCAATTAGTGTTTTGATAGCTGGTTTTATCCTTGGATCGTCAACATAACATCATAGAAAGTTAGTCTTATTCTGTACACAACAGATCAAGTCAGTCTTATGTTTGTACCTTCTTGTTTGGTTTCTGATTCAGATGAACAGGTTGGAATCACAGAAGATTCAGCCTCCATTATCACCCCTATAATTTTGCGGAAGGATGCGGCAACTCAAACAAGCCCAAATCTAAGTCGGTCATCTTCGCCCAGTGTCAGTACTCCATTTATCCATTTGCTTACGACACACCAAGTCAGAGAAAAGGAGAATTGTTTCTCTGATGTTATCAGGGATGTGCACATGGACGATCGAGTGACTCTTACCAGGTGGTCCAAGAAACATGTTACACGAGCATCTAGCAAGAACTCAACAAATGTTATAGATGTGAAGAAAAAGACAGTGGAGTCTAAGTCTTCTTCCTGGGAATTAACAGAAGCAAAATCCATATCAAAGTAAGAGACCACCAATTGTTTTGGTCCTGCAGATGAGTTTGAGTAGCATTTTCTTCGGACATAACTTTATTATGTTGAACCACTAAATTACTAACAGAAGCAAAATCCATATCAAAGTAAGAGACCACCAATTGTTTTGGTCCTTCAGATGAGTTTGAGTAGTATTTTCTTCAGACATAACTTTGTTACGTTGAACCACTAAATTACTACTATAAGACTTGAAAGATTAATTTAGGGAAAGAATGCTGCATGTCTTTCTTATCTGTTATAGTACGCAAGTTATCCAATGCTTTTAATATTTTCCAAAAACTTGCAACTTAAATTTACACCATCAAGCCGTGAAATGCTAATCACTCCATGCAATGTTAAAAGGGTTGAGCGAGAGCAAGAAAAAATTACTGCTTGGGAACACCTCCAAAAAGCCAAGGCTGAGGCAGCAATCCAAAAGTTAGTGGTATGTGTGCTCTTTTCTTTACTTCTTTACTTCTAACAGATTTATAGGTCTGTTTTATCGGACTTATTTATGTTGTTGTAAAGAGCCTATATACTGTATACACGACCAAAATTCTCAAAGTTAAATTAACGCTCATGTAAATCACTGGATTCTTTTCCACTGATGTACATTTGACCTTACACTATACGCATGCTTTTGTTATGTCAGATGAAAATCGAGAAAAAGAGATCATCTTCACTGGACAAGATTTGGAACACCCTCAGGTCTGCACAAAGAAGAGCACAGGTAATGCGTGAAACTGCAGCAGCAAACCAGGATGAGCAATCTTCCGGGAAGGCTAAAAGGACATCACACCTTAATAAGAACGGCCAGATCAGCTCTCTGAGTGGCTGCTTCACTTGCCATGCCTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030898