BGIOSGA030932

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Revision as of 09:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030932| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030932, complete gene.| tag = OJ1005_...")
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Gene Name

BGIOSGA030932

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030932, complete gene.

LocusTag

OJ1005_D12.38

Ensembl Transcript ID

BGIOSGA030932-TA

Ensembl Protein ID

BGIOSGA030932-PA

Length

3511

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16392148..16395658

Sequence Coding Region

16392148..16392471,16392565..16392666,16393003..16393132,16393348..16393440,16393513..16393601
,16394039..16394119,16394268..16394357,16394834..16394923,16395028..16395078
,16395276..16395322,16395472..16395529,16395602..16395658

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16392148..16395658 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16392148..16395658 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTCCCTCCGCGCCGCCGTCCGCCCTCCGCCTCCGGGGGCTTCCCAAGGCTTCGGTGCCGGCCTCCTCCTCTTTCCCGCCCTCCGCTCGCTTCCCCCACCACCTCTCCATGTCCGCCTCCTCGTCTCGCCGCCCTCCGCCCCTCGCCGCAACGGCGGCGGCCGCCGGGACCGGGAGTGGCGCCTCCCCATCCCTCCTCGCAGCCGACCCGGGCCACCGCGACGCCGTCCTCCTCGCCGCTCGCGGCGCCATGGCGAACTGCCTCGGCGAGACCAGCCTCCACCTCGCCGTCCCCGGGCTCCGGCTCGCGGCCAAGGGCAAGGTGAGGGACGTGTACGAGAGCGGGGAGCATCTGGTGCTGGTCACCACCGACCGGCAGAGCGCGTTCGATCGCGTCCTGGCTTCCATCCCTTTCAAGGGGCAGGTGCTCAACGAAACAAGCCTTTGGTGGTTCGATAGGACCCGTCATATCACTCCAAATGCAGTAGTTTCTTCTCCTGATAAGAATGTGACAATTGCAAAAAGGTGCTCAGTTTTTCCAGTTGAATTTGTTGTGAGGGGATATGTTACTGGAAGCACTGATACATCTTTGTGGACTGTTTATAACAAGGGTGCGAGGAACTATTGTGGAAATGTTCTACGTGATGGACTGGTAAAGAATCAGAAGCTATCTGCAAATATACTTACACCAACAACTAAAGCTGCAGATCATGATGTTCCTGTCACTCCTGAAGAGATTATCAATTCAGGACTAATGTCAAAGGAAGATTTTGATGAAGCAAGAAGCAAAGCCTTAAGCTTATTTGCATATGGGCAGGAAGTGGCCTTAGAGAATGGACTGATTCTAGTTGACACAAAGTATGAGTTTGGAAAAACAGCTGATGGGACAATCATGTTGATTGATGAGGTACACACTCCTGACTCCAGCAGATATTGGATTGCTGATTCTTACGAAGAGAGATTCAGTTCTGGTCTTGAGCCTGAAAATGTTGACAAGGAGTTCTTAAGACTCTGGTTCAAGAACAATTGCAATCCATACGAAGATGCGGTTCTGCCTGAAGCTCCAGAAGAACTAGTTTGTGAACTAGCTTGGCGGTACATTTTCCTGTTTGAGACAATTACAAACACAAAGTTCGAGATCCCCAAAACTCAGGAGCCGATTCACGAAAGAATATCAAGGAATGTTGCACAAGCCTTGCAGAACCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MSPSAPPSALRLRGLPKASVPASSSFPPSARFPHHLSMSASSSRRPPPLAATAAAAGTGSGASPSLLAADPGHRDAVLLAARGAMANCLGETSLHLAVPGLRLAAKGKVRDVYESGEHLVLVTTDRQSAFDRVLASIPFKGQVLNETSLWWFDRTRHITPNAVVSSPDKNVTIAKRCSVFPVEFVVRGYVTGSTDTSLWTVYNKGARNYCGNVLRDGLVKNQKLSANILTPTTKAADHDVPVTPEEIINSGLMSKEDFDEARSKALSLFAYGQEVALENGLILVDTKYEFGKTADGTIMLIDEVHTPDSSRYWIADSYEERFSSGLEPENVDKEFLRLWFKNNCNPYEDAVLPEAPEELVCELAWRYIFLFETITNTKFEIPKTQEPIHERISRNVAQALQNL</aaseq>

Gene Sequence

<dnaseqindica>1..324#418..519#856..985#1201..1293#1366..1454#1892..1972#2121..2210#2687..2776#2881..2931#3129..3175#3325..3382#3455..3511#ATGTCTCCCTCCGCGCCGCCGTCCGCCCTCCGCCTCCGGGGGCTTCCCAAGGCTTCGGTGCCGGCCTCCTCCTCTTTCCCGCCCTCCGCTCGCTTCCCCCACCACCTCTCCATGTCCGCCTCCTCGTCTCGCCGCCCTCCGCCCCTCGCCGCAACGGCGGCGGCCGCCGGGACCGGGAGTGGCGCCTCCCCATCCCTCCTCGCAGCCGACCCGGGCCACCGCGACGCCGTCCTCCTCGCCGCTCGCGGCGCCATGGCGAACTGCCTCGGCGAGACCAGCCTCCACCTCGCCGTCCCCGGGCTCCGGCTCGCGGCCAAGGGCAAGGTGAGCAAAAAAAAAAAAAAAACCATTGGCCTGTGTTGCCCCACTGATTCTCCGATTGGACTAGGGAGTGACCGATTGCGTTTCTGGGTGAAGGTGAGGGACGTGTACGAGAGCGGGGAGCATCTGGTGCTGGTCACCACCGACCGGCAGAGCGCGTTCGATCGCGTCCTGGCTTCCATCCCTTTCAAGGGGCAGGTATATACTCCTTATCTGTCGTTATTCAGTGCCAATGTTGACAAGCGTTTGTTCAGTTTCCATGTCGATGATATTTTGGTGATAGGCTGCACTGCCTGGATTTTTAGCCCTTGTTGTTGTTTCATGCAACTGCAGTATTTGCCAGTAATGGTTTGCAAGTAATAATCAACTGAGAATATGAGAAGGGTCTGTTCTTAGTCATGCCTAGAATTTTGTCAATTGTTAATCTAGCTGTTTATTCCCCTGTTGATTGTACAAGCAGAATGTATGTTGGAACTAGCGATTATCGCTTGCATGGTCGATCATTTTGATGTGCTTTCATCTGGTTGAATATAGGTGCTCAACGAAACAAGCCTTTGGTGGTTCGATAGGACCCGTCATATCACTCCAAATGCAGTAGTTTCTTCTCCTGATAAGAATGTGACAATTGCAAAAAGGTGCTCAGTTTTTCCAGTTGAATTTGTTGGTGAGACCTAAGGCTTGCTGCATTTACTGATTATTTCTCCTACTGCTTTGCAATCATATCCCTCAGAATTTTGTTGGCTGTGTTGATCAATTAGTTCTTTGTTTTCGTGATTCTTATGAATCTTGTCTATCATCCTTTTTTTTTAAAAAAAAAATCTTATGGAGAACTGTTATCTGTGTTGATCAATTAGCTTTATTTTCATGCTTTTTTTTCAGTGAGGGGATATGTTACTGGAAGCACTGATACATCTTTGTGGACTGTTTATAACAAGGGTGCGAGGAACTATTGTGGAAATGTTCTACGTGATGGTATGCTGAACCAACAAACATCCAAATTGGATTTTTTTTCTTTACTTACAGTGAGTGGCCTCTTATATGCAGGACTGGTAAAGAATCAGAAGCTATCTGCAAATATACTTACACCAACAACTAAAGCTGCAGATCATGATGTTCCTGTCACTCCTGAAGAGGTCTTTACTCTCCTTCACTTTTATGTCAACATAATCTTAACAGTCTAACTCCATAATGATTCCCCTCAAAATAGACACTAGCTTATATAGGGAAGGGGATAAACAGATGCTCTTGGTAGTCTAACATTGGAATTACATTGGTGTATTGGAGAAAGGTGGAAAATTAACGATGGCACTAGTTGAAGCCTGTCATTCTGGAGTCACAAAAGTTACCGTACTGTCTTTAGTCAGTTATTGAAGTTTCTCCTTTGCTTATAAGTCTAATTATCACAGTTGGCAGTAATCTAGAAGTCCTTGAATGATTCATGGATCTCATTTTCCTTTTTATGAGCTATTTTAGTTGCATTTTGTGCCTCCTTGGTGTTTATTCTTCAGCATGTAAATGCTACCGTATTTATTCATCGCCTCCAAAGAGGTCATGACATTGCATTCTGCAGATTATCAATTCAGGACTAATGTCAAAGGAAGATTTTGATGAAGCAAGAAGCAAAGCCTTAAGCTTATTTGCATATGGGCAGGTGATTAATTCTCATATCTTCTGGTTCTTGTAAGGTGTCAGTTGCATGCCTAATAATCTTCTATAGCAATGTCACTGGCAATGTTAACATTGGACCTGGAACATCTCAAATTTAGCCTTGATATGCCTTTTTATTTAAATCTCTGCAGGAAGTGGCCTTAGAGAATGGACTGATTCTAGTTGACACAAAGTATGAGTTTGGAAAAACAGCTGATGGGACAATCATGTTGATTGATGAGGTTACATCTTCTTACATGATTTTATCCTTGTGATATGTTCTGCCTTCAAATTTTATGCCTGTCGGTCTCAGGAAACAGAAAGAGCATGGCTGATCCAACCTTAGATAACTATGCCTGACTAGCAACTTGTGCTAGCTGTGCTCACTGTTTCTCTCTATAAACGTAACATGCTCGTCATGACATCACTTTAGTGTGTTATTGTGTTGGAACTACCCTTACATAAGTACATGTTTTGTTTTCATATTTGGTAAGTGATTTTTGCACAAAAACCAAGCCAAGGGATTTTTGTGCTGGGGCTTGTTCTAAGGGTTTGAGTTACCATTTCGCCAACCGGTTCCCATTCCCAGAAATATAGTTTCTAGGATTTTTTTTATTTTTTTTAAAAAATGTTGCATGTCTTAATCTCTTTGATAATTTCTAATATATTTAATGATGATTTCTAACAGAATTCCAAATTTCCTCTTTTTGACAAGCAGGTACACACTCCTGACTCCAGCAGATATTGGATTGCTGATTCTTACGAAGAGAGATTCAGTTCTGGTCTTGAGCCTGAAAATGTTGACAAGGTAGACTGCTCCTGAAACTATACATGTGGCAGTGTTATGCCTTAAACTTATTATGCTTTTAATTTACAATGGAATTGCTGAAGATGTGATTTTATTTTCACCAGGAGTTCTTAAGACTCTGGTTCAAGAACAATTGCAATCCATACGAAGATGCGGTATACCATTTTTCCTTAAACCACTTAAGCATTTTCCATAGTAAGCAAATGTTGATAATTAGTGAAATATGAGATGTCCATGAATAGGTCCACGTATAAATTCCATGTCCATTGACTGCGTGTTTGTTTGTCTTTTGAAGGCTCTTTGTTTTTGTGAAAACTCATTTCATGTTTATCTGTTACTTTAAAATACTCAGGTTCTGCCTGAAGCTCCAGAAGAACTAGTTTGTGAACTAGCTTGGCGGTATGTCTATTTCTCTGAGTTTGTTCTAGTACTTCTCATTTCAGAGCATGTTCAACCAACAACTTTATGTGCTTCTCTATGTACATGAATCTCGTACAAACATGATATCATATTGGTTGAATTATAGTTTGCTTAAATATCCACCACAGGTACATTTTCCTGTTTGAGACAATTACAAACACAAAGTTCGAGATCCCCAAAACTCAGGTATGTGACGACAGTTTGGTGAATTTGCTGTAACTGACAACCATATACTTAAAACATTTTTGTTAAATGCAGGAGCCGATTCACGAAAGAATATCAAGGAATGTTGCACAAGCCTTGCAGAACCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030932

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030932&oldid=30136"