BGIOSGA030981

From RiceWiki
Revision as of 09:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030981| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030981, complete gene.| tag = OsJ_297...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030981

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030981, complete gene.

LocusTag

OsJ_29776

Ensembl Transcript ID

BGIOSGA030981-TA

Ensembl Protein ID

BGIOSGA030981-PA

Length

4185

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17133838..17138022

Sequence Coding Region

17133838..17133844,17133938..17134223,17134311..17134410,17134518..17134784,17134923..17135000
,17135081..17135182,17135265..17135314,17135430..17135526,17135885..17135998
,17136132..17136303,17136502..17136854,17137449..17137535,17137987..17138022

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17133838..17138022 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17133838..17138022 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAGTGAGCCATGGCGAGGAGCTCGAGATATCGCCGTGCGACCCGAACTCCGAGGACGACCGGCGGCGGCGCGGGATGGGGTCGTCGCTGCGGCGGAAGGCCATCCGCGCGCTCCGGAAGCGCGGCGGGCGGCGGCGGCGCCGCCGCGTCGACTTCCGGTACCCGGCCGCCATGTCCATCGAGGACGTCCGCGACGCCGAGGAGGAGCTCGCCGTCGCCGCGTTCCGCGACCGCCTCGCCGTGCACGCCCTCCTCCCCGACAAGCACGACGACTACCACATGATGCTCAGGTTTCTGAAGGCAAGAAAGTTTGATTCGGAGAAGGCGATGCAAATGTGGGCGGAGATGCTGCGATGGAGGAAGGAGTTCGGAGCCGACACGATCTTGGAGGAGTTCGAGTTCGATGAGCTCGACGACGTGCTCCGGTACTACCCTCAGGGCTACCATGGCGTCGATCGGGAAGGCCGGCCGGTGTACATCGAGAGGCTCGGCAAGGTGGATCCCAACAAGCTGATGCAGATCACCTCGGTGGACAGGTACATCAAGTACCATGTGCAGGAGTTCGAGAGGGCTTTCAGGGAGAGGTTCCCTGCCTGCACATTGGCGGCCAAGAGGCACATTGATTCCACAACCACCATACTGGATGTCCATGGCGTGGGGCTGAAGAATTTCTCAAAGACTGCAAGGGAGCTTGTTCACCGGATGCAGAAGATAGATAGTGATTACTATCCTGAGACATTACATCAGATGTATGTAGTGAATGCTGGCAGTGGCTTCAAGCTGATATGGAACAGTGTGAAAGGGTTTCTTGACCCAAAAACTTCTTCAAAGATTCATGTTCTTGGTACAAACTACCAGAGTAGACTTCTTGAAGTAATTGACAAAAGTGAATTGCCAGAGTTTCTTGGCGGTTCATGTACATGCAGTGAAGGTGGTTGCCTTGGTTCTAACAAAGGGCCGTGGAATGATCATGTCATTTTGAAGGGGATGATGAGTGATATATCAAATGCTGAATCAGAGTCAGATGTTGATGAGTTCAGTTTATCAGCTGTCCTGAGGAGTACTGACTACAGTTTCCTTACTCCAGTTAGCGAAGAAGTTAAGGGATCAGATTCTTCAACTTTCTGTAGTTGTGAGTCTTGTGACAGGAAGGGTCTCCCAGATGTAACTCCTGAATCTTCTCAGTCTGTACAACAATCTTCTGAAATGGTGCCAAACCAACTGGTCTCTCATGAACATTCATCCACAACCAGATGGATGAATAATTTAGGGAACATGGCAATTAGTTTTCATGGCACTCTGACTGGAAGGACTTTGAGCAATTTCGTTAGAGTAGTAGGCACACTCATGATCAAGATACTAGCCGTTTTCAGCCTTTTTGTCAGTAGAAGAGGAAACATGCTAGAGAATGTTCATCCTTCTAATGTAGAAGATGAACCTCAGCCTCGAAGTGCACCGGAAGATAACATGAGTGCTTGTTTACAACGTCTTGAAAAACTTGAATCATTATGCAATCATCTCATGAGCAAACCTCCAGATATGCCAAAGGAGAAAGAGTGTCTACTGCTACAATCGTTTGATCGGATAAAAACCATCGAATCGGATCTAGAAAGGACTAAAAGAGTATTGCATATGACCCTGGTCAAGCAGATGGAGATGATGGAGACCTTGGAAGCTATGCAACACCACCACCAATCTTCCAGTGTCAGGGACGTTTCATGGCGGCTGTGCTTCTTCCTTTGCTAA</cdnaseq>

Protein Sequence

<aaseq>MSVSHGEELEISPCDPNSEDDRRRRGMGSSLRRKAIRALRKRGGRRRRRRVDFRYPAAMSIEDVRDAEEELAVAAFRDRLAVHALLPDKHDDYHMMLRFLKARKFDSEKAMQMWAEMLRWRKEFGADTILEEFEFDELDDVLRYYPQGYHGVDREGRPVYIERLGKVDPNKLMQITSVDRYIKYHVQEFERAFRERFPACTLAAKRHIDSTTTILDVHGVGLKNFSKTARELVHRMQKIDSDYYPETLHQMYVVNAGSGFKLIWNSVKGFLDPKTSSKIHVLGTNYQSRLLEVIDKSELPEFLGGSCTCSEGGCLGSNKGPWNDHVILKGMMSDISNAESESDVDEFSLSAVLRSTDYSFLTPVSEEVKGSDSSTFCSCESCDRKGLPDVTPESSQSVQQSSEMVPNQLVSHEHSSTTRWMNNLGNMAISFHGTLTGRTLSNFVRVVGTLMIKILAVFSLFVSRRGNMLENVHPSNVEDEPQPRSAPEDNMSACLQRLEKLESLCNHLMSKPPDMPKEKECLLLQSFDRIKTIESDLERTKRVLHMTLVKQMEMMETLEAMQHHHQSSSVRDVSWRLCFFLC</aaseq>

Gene Sequence

<dnaseqindica>1..7#101..386#474..573#681..947#1086..1163#1244..1345#1428..1477#1593..1689#2048..2161#2295..2466#2665..3017#3612..3698#4150..4185#ATGTCAGGTAAGAGAAGCAGTTCTTGGCATTGAAACTTTTCATCTTTCTTTCTTTTTTCTTTGCGTTTGTCGGATGACACGCTCGTTGTGCTCTGCACAGTGAGCCATGGCGAGGAGCTCGAGATATCGCCGTGCGACCCGAACTCCGAGGACGACCGGCGGCGGCGCGGGATGGGGTCGTCGCTGCGGCGGAAGGCCATCCGCGCGCTCCGGAAGCGCGGCGGGCGGCGGCGGCGCCGCCGCGTCGACTTCCGGTACCCGGCCGCCATGTCCATCGAGGACGTCCGCGACGCCGAGGAGGAGCTCGCCGTCGCCGCGTTCCGCGACCGCCTCGCCGTGCACGCCCTCCTCCCCGACAAGCACGACGACTACCACATGATGCTCAGGTGGAGAAATGCCAAGAAAAAAGAAACAGAAAATCTATCATTTTTTCCCCCAAAAAGTAGCTAATGATAACTCCCGTCGTGATTCAGGTTTCTGAAGGCAAGAAAGTTTGATTCGGAGAAGGCGATGCAAATGTGGGCGGAGATGCTGCGATGGAGGAAGGAGTTCGGAGCCGACACGATCTTGGAGGTGATCAGAGATTCAGATTGTAACATTTTCACCTGATAACTTACAGTGTCTGAATAATTTTTGGATTGTTCATTTGTTCTTCATTTCTTGGGTTTCTTGTGGTTTAGGAGTTCGAGTTCGATGAGCTCGACGACGTGCTCCGGTACTACCCTCAGGGCTACCATGGCGTCGATCGGGAAGGCCGGCCGGTGTACATCGAGAGGCTCGGCAAGGTGGATCCCAACAAGCTGATGCAGATCACCTCGGTGGACAGGTACATCAAGTACCATGTGCAGGAGTTCGAGAGGGCTTTCAGGGAGAGGTTCCCTGCCTGCACATTGGCGGCCAAGAGGCACATTGATTCCACAACCACCATACTGGATGTCCATGGCGTGGTATGTATGCCAATGACAAAGCTCCAACATTGGGTTTGGATATATGTGTGTTGTGTTGTCTTTAGTGTTGGTTTTTTGTCAATCCTTCAGTTTTAATGTTGCTGTTGTTGTGTTGTTTTGTTTTGTTTGTTGTTGCAGGGGCTGAAGAATTTCTCAAAGACTGCAAGGGAGCTTGTTCACCGGATGCAGAAGATAGATAGTGATTACTATCCTGAGGTAATTTTGGATTTCCATGGGTGTGATGTGTGTAGTGTTGGTTAGTGAAGTGCACATTTTAATTGCACATGAATTTGCAGACATTACATCAGATGTATGTAGTGAATGCTGGCAGTGGCTTCAAGCTGATATGGAACAGTGTGAAAGGGTTTCTTGACCCAAAAACTTCTTCAAAGATTCATGTAAGTGACATGTTTGTGATCAATGAGGATTAGCATCTTACTGGTGTGTTAAAATTGGGTCTAAAATTGTTGTTTTGCTTAGGTTCTTGGTACAAACTACCAGAGTAGACTTCTTGAAGTAATTGACAAAAGGTTAGTATCAACTAGCTGCAACTAGCAACCATCGTTGAAACTCAGCTTGTATATATTTATACAGCTATAGCTCTTCAGCTTACCAAGATTTGGAAAATGCTTTGTGATTTCACAGTGAATTGCCAGAGTTTCTTGGCGGTTCATGTACATGCAGTGAAGGTGGTTGCCTTGGTTCTAACAAAGGGCCGTGGAATGATCATGTCATTTTGAAGGTACCTCTCAATTTGTGATCCTGACCATACTTTTGTACAACAGCCCCAACATTAGAAATGCTGTCCATGGAAGATTACTTGTGAGTTGTGACAGCGTTCTAGAAATGAATATCCCTCTGAAAAGTAAACTAATGTGGAAGTTTCTTTTGTAGCTGATACACAGTATGAGGAGCAGTAGTAGTATGAGGGAAATCAAGCAAGTTTCTGATAGCGAAGACAGGAGCGGATCTTCCCTAAGGGCAGAAAAATTGAAGGCAAGGTTCTGAATGTCTCTTTTCCTTCAACCATTCCAAACTCCAATGAAGTATTGCTTCGTAGTTCCTGATGAACCTTTTGCTATTGTTTCTTCTGGAAGCAGGGGATGATGAGTGATATATCAAATGCTGAATCAGAGTCAGATGTTGATGAGTTCAGTTTATCAGCTGTCCTGAGGAGTACTGACTACAGTTTCCTTACTCCAGTTAGCGAAGAAGTATGTGCTGTGCTTATTTGTTGAACTATCCTTTACTTTAACTAAGATACATTATCTCCAGTTATTTTGATGCCTTGAGCTATGTTCTTGATACATTATATGAACTGACTCGATATCAAAATGCCTGCACTAGGTTAAGGGATCAGATTCTTCAACTTTCTGTAGTTGTGAGTCTTGTGACAGGAAGGGTCTCCCAGATGTAACTCCTGAATCTTCTCAGTCTGTACAACAATCTTCTGAAATGGTGCCAAACCAACTGGTCTCTCATGAACATTCATCCACAACCAGATGGATGAATAATTTAGGTACCTCTTCTTTTTCATAGCAAGTTAGTTGCATTTCAGTACAGTTTCCACTTTAGAACAACAAAAAGTGTATCTTCTGTTCAAATAATTCACCACACCAAATATCTCTTTCAGATTTTGTCTTTTCAGCCACAGTCTTATTTTACTGTATAATTATTTATAACCACTTCTTTTGAATACCCATTTTTGCTCTTGCAGGGAACATGGCAATTAGTTTTCATGGCACTCTGACTGGAAGGACTTTGAGCAATTTCGTTAGAGTAGTAGGCACACTCATGATCAAGATACTAGCCGTTTTCAGCCTTTTTGTCAGTAGAAGAGGAAACATGCTAGAGAATGTTCATCCTTCTAATGTAGAAGATGAACCTCAGCCTCGAAGTGCACCGGAAGATAACATGAGTGCTTGTTTACAACGTCTTGAAAAACTTGAATCATTATGCAATCATCTCATGAGCAAACCTCCAGATATGCCAAAGGAGAAAGAGTGTCTACTGCTACAATCGTTTGATCGGATAAAAACCATCGAATCGGATCTAGAAAGGACTAAAAGAGTAAGTTAGTTTGCAAACTAATTTGTCATGCAAATTTTTGTTAGTATGTTACTGCACTAAAAAATCCGACTTCAGAGGCAAAATGTGTTTCTCCATTCCCTATGATTGTGTTTTGTCTTCTCTTCTGTTTACTTTGGGTCTGCCCTCTTTTCTCAGCATTAATATTTCTATTTGTCTACGCACTGCATTTTATGACTTCAAGATCTTGGGGACATTTAAAATGGCAAATGGTTCAGAGAAACTAACATTTTTTGTTCCCCATATGCCTGGGAAACAGACAAACAGTAGTAGAGGCCCCTACAGTATATATATTTTATAGAATATATACAGAGTTTATGTACCTACAACAATAGGCCCCATTTTTGGTTCACCATTGTTCAATAGACTGACAAAACATCCTATCCCTTACATACCCTGAACTGGTAAATGTCTTTAGTAGAAGTTTCAGGCTTTTGCCATCCTTCCCTAGACCCCATCAGTGTGTTTTATTATCTCTTTAGATTTGTCCGATCGATCAGTCACACTGAACCATGTTTAATCTCTCTCTTATCAGACATACATTACAGTTCTTTCTCTTGCTGCATTTTCCATCAGGTATTGCATATGACCCTGGTCAAGCAGATGGAGATGATGGAGACCTTGGAAGCTATGCAACACCACCACCAATCTTCCAGTGTCAGGGTGAGTCAATCACAAACCTTCATTTTCATTTATGCATGTTAATAGAACTTGCCTTGTGATATTATCCTGGCTACTTTTGCAGAGGAGATTGTGCTGTTCATAAGTAAAAGACTGCTCTTGTCTGGCTGGCCTTGAGCGACCATGAAGACTGAAGCTGTAGCCTGAAAACCTTCTGCAAGTGCCATTTTTGACTCGGAGATCTTCAGCCCTGTGCAGAGGAAAGATCATCGCTCGCTCAGCTCTGTCGCTGGCTTGCTGCATCGCAGCTTGTGAATCCGTTTTGGTAGCTGTTAATCTCAACAATAATCCCTTTTTTGCCTCCCTGAACATTACCAATAGCAGGATCAGTGATGCATCTGTCAGCTGCTGTAGCTCTCTGCTCTGAATTGGAGGATTGAAGGGAGAATCTCTTGTTACATTGTCTGAATTTTTGTGATCCATATGCTGAAAGGACGTTTCATGGCGGCTGTGCTTCTTCCTTTGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030981

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030981&oldid=30185"