BGIOSGA031038

From RiceWiki
Revision as of 09:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031038| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031038, complete gene.| tag = OS09G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031038

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031038, complete gene.

LocusTag

OS09G0503000

Ensembl Transcript ID

BGIOSGA031038-TA

Ensembl Protein ID

BGIOSGA031038-PA

Length

1481

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18105988..18107468

Sequence Coding Region

18105988..18106077,18106157..18106298,18106576..18106664,18106758..18107468

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18105988..18107468 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18105988..18107468 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACGACGCCGTCTCCTCCTCCCTCCGCGACGACAATGCGCGCCGTGCAGTACGACGGCTACGGCGGCGGAGCCGAAGGGCTCAAGCATGTGGAGGTGCCGATCCCGTCGCCGAAGAAAGGCGAGGTGCTGATCAAGATGGAGGCGGCGAGCATCAACCCCATCGACTGGAAGATTCAGAAGGGGATGCTCCGGCCATTCCTGCCATGGAAGTTCCCATCAATTCCAGCGTGCGATCTCGCCGGAGAAGTCGCGGCGGTCGGCGGCGGCGTGCGCGGGTTCGAGCTCGGCAACAAGGTCATCGCCATCAATTTCCCGAGTGGCGGCGGCTTCGCCGAGTACGCGGTGGCGCAGGCGTCGCTCACGGTGGAGCGGCCGCCGGAGGTGTCCGCGGCGGAGGGCGCGTGCCTGCCGCTCGCGGCGGTGACCGCGTTGCAGGCGCTGAGGGCCGCGGGGGCCGGCCTGGACGACGCGCCGCCGCCCAAGAACGTCCTGGTCACCGCGGCGTCCGGCGGCGTCGGCCACTTCGCGGTGCAGCTCGCCAGGCTGGGCGGCCACCGCGTCACGGCCACCTGCGGCGCGCGCAACCTCGCCCTCGTCGCCGGGGAGCTCGGCGCCGACGAGGCGCTCGACTACGCCACCCCGGACGGCGCCGCGCTCCGGAGCCCGTCGGGCAGGAGGTACGACGCCGTGGTGCACTGCGCGCCGCACCTCCCCTGGCAGGTGTTCGACCGCGTCCTCGCCGAAGGCGACACCGGCGGCGTCGTCGTCGACATCACGCCTTCCCCCGCGGCCTTGGCCACCGCGCTGCTGCACAGGGTGACCTTCTCCAAGAAGAGGCTGACGCCGTTCATGTTCTCGCCGAGCAAGGCGGACATGGAGCTCCTGGTGGCCATGGCGAGGCAGGGGAAGCTCAAGCCCGCCGTCGACTCGTGCCACCCGCTGAGCGACGCGCCGGCGGCGTGGGCGAGGAGCATGGGAGGGCACGCCACCGGCAAGGTCGTCGTCAAAATCGGAGAAGAAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MATTPSPPPSATTMRAVQYDGYGGGAEGLKHVEVPIPSPKKGEVLIKMEAASINPIDWKIQKGMLRPFLPWKFPSIPACDLAGEVAAVGGGVRGFELGNKVIAINFPSGGGFAEYAVAQASLTVERPPEVSAAEGACLPLAAVTALQALRAAGAGLDDAPPPKNVLVTAASGGVGHFAVQLARLGGHRVTATCGARNLALVAGELGADEALDYATPDGAALRSPSGRRYDAVVHCAPHLPWQVFDRVLAEGDTGGVVVDITPSPAALATALLHRVTFSKKRLTPFMFSPSKADMELLVAMARQGKLKPAVDSCHPLSDAPAAWARSMGGHATGKVVVKIGEEE</aaseq>

Gene Sequence

<dnaseqindica>1..90#170..311#589..677#771..1481#ATGGCCACGACGCCGTCTCCTCCTCCCTCCGCGACGACAATGCGCGCCGTGCAGTACGACGGCTACGGCGGCGGAGCCGAAGGGCTCAAGGTTACATACGCCTGCGAGTTTCACTCCCACTCCCAGCTTAGCTTCTGCTTCTCTGGTTTTCTGATGTGTTTGTGTTCAGCATGTGGAGGTGCCGATCCCGTCGCCGAAGAAAGGCGAGGTGCTGATCAAGATGGAGGCGGCGAGCATCAACCCCATCGACTGGAAGATTCAGAAGGGGATGCTCCGGCCATTCCTGCCATGGAAGTTCCCATCAATTCCAGGTACTAGCAATTAAGATTTCAAGATTCAAGAGCAGTTATGTCTAGATTTATAGCTAGGATTTGCTTTTTTTAATATATATAGTAGTATGCAGTATGCACTAGCTAGCAAGTAAAATTTTAAGATTCAAGAACAGCTATGAATTTGGACATATGCGTGTTTTTTTCTATATTCGTAGCTAGGATTTGTTTTTTTTTATATATAGTAGGATGCACTAGCTAGCAAGCTAAAAGAATAACAGGAGCTAGTGATCGCTAATGTGTATACGTGGTCGAGCAGCGTGCGATCTCGCCGGAGAAGTCGCGGCGGTCGGCGGCGGCGTGCGCGGGTTCGAGCTCGGCAACAAGGTCATCGCCATCAATTTCCCGGTACGATAGAAGTTTGATTTCTTTCTCTTTTTTTTTCTCTTCTTTTGATCGATCGAGTTGAGTTCAGTTTTTGAGTGTGATTTATCCGAGCAGAGTGGCGGCGGCTTCGCCGAGTACGCGGTGGCGCAGGCGTCGCTCACGGTGGAGCGGCCGCCGGAGGTGTCCGCGGCGGAGGGCGCGTGCCTGCCGCTCGCGGCGGTGACCGCGTTGCAGGCGCTGAGGGCCGCGGGGGCCGGCCTGGACGACGCGCCGCCGCCCAAGAACGTCCTGGTCACCGCGGCGTCCGGCGGCGTCGGCCACTTCGCGGTGCAGCTCGCCAGGCTGGGCGGCCACCGCGTCACGGCCACCTGCGGCGCGCGCAACCTCGCCCTCGTCGCCGGGGAGCTCGGCGCCGACGAGGCGCTCGACTACGCCACCCCGGACGGCGCCGCGCTCCGGAGCCCGTCGGGCAGGAGGTACGACGCCGTGGTGCACTGCGCGCCGCACCTCCCCTGGCAGGTGTTCGACCGCGTCCTCGCCGAAGGCGACACCGGCGGCGTCGTCGTCGACATCACGCCTTCCCCCGCGGCCTTGGCCACCGCGCTGCTGCACAGGGTGACCTTCTCCAAGAAGAGGCTGACGCCGTTCATGTTCTCGCCGAGCAAGGCGGACATGGAGCTCCTGGTGGCCATGGCGAGGCAGGGGAAGCTCAAGCCCGCCGTCGACTCGTGCCACCCGCTGAGCGACGCGCCGGCGGCGTGGGCGAGGAGCATGGGAGGGCACGCCACCGGCAAGGTCGTCGTCAAAATCGGAGAAGAAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031038