BGIOSGA031085

From RiceWiki
Revision as of 09:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031085| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031085, complete gene.| tag = OsI_320...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031085

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031085, complete gene.

LocusTag

OsI_32028

Ensembl Transcript ID

BGIOSGA031085-TA

Ensembl Protein ID

BGIOSGA031085-PA

Length

3734

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18796040..18799773

Sequence Coding Region

18796040..18796177,18796311..18796373,18796597..18796663,18796748..18796848,18797537..18797581
,18798412..18798456,18798684..18799154,18799603..18799773

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18796040..18799773 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18796040..18799773 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGTCACCTTCAATTCTCTCACAGTGCCTGGCCGGCTTCCTGTCGCATGAAAAAGCTGCAGCCCACTGCGTTAATGTCGTGCCCGAGAGAGAGTCACACCCTCCGTCACCAGCAGTCGAGATTGTCCCGTCAAAGAATGTTCATCCATACAAGTATGCAGGCGAGAATATTGAAATGCATGGCATGAATATATTTAAGGGAAAGGTCAGTGTTGTCGATATTGTTGGTCTATCTGGATCAGAGGTTATAACTCCAAAAGGTGAAGGGCCTCTGAAGTGCTGTGAGAGTTCAATTGACCTAGTGAATGTTCTTAAGAATGAGATCCGTGATGGACTATTGACATTCAGAAGCAAACAGGTTTTAGAGCTTGGCTGTGGATATGGGCTTCCTGGGATATTTGCTTGCCTGAAGCTTGGCTGTGGATATGGGCTTCCTGGGATATTTGCTTGCCTGAAGGGAGCTTCAACAGTGCATTTTCAGGATCCGAGTGCTGAAATAATAAGGTGCAAAACAATACCCAATGTGCTTGCAAATCTTGAGCATGCTCAAGACAAACATGGTCAACAACAAGGAAGCCCCCTTACTCCATCTCGGCAGCAATTGCCTCAAGATATCCATTTCTATGCCGGGGAATGGGAGGAGCTTCACACTGTTCTGTCAGTGATTCAGGAGGATGAGGTGGACACATCATCAGGTGTAGCACTAGAGTTCTGTGAAGATGACTTTCTGGATGGTTGCAGTAGCCAAGATGCAAGCAATATTTGCCATGAAACCTCTTCAAGGCGATCAAGAAAACTATCAGGAAGCCGTGCATGGGAGAGGGGGAATGAGACTACCACAGGAGATGGTGGATATGATATACTGTTAGTCAATGAGATCCCTTGTTCTGCAAGCTCTCTTCAAAACCTCTATTTGCTCGTAAAAAAGTGCCTAAGGCCGCCATATGGGGTGATGTACCTTGCTGCAAGGAAGAATTACATCGGCTCGAGCAGCGCGGTGCGGCAGCTCCGATCCCTGGTGGATGAAGAAGGCGCATTTGGCGCGCACCTCGTCTCTGAGCCCCCAGAGAGGGAGATCTGGAAGTTCTTCTTCAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MRSPSILSQCLAGFLSHEKAAAHCVNVVPERESHPPSPAVEIVPSKNVHPYKYAGENIEMHGMNIFKGKVSVVDIVGLSGSEVITPKGEGPLKCCESSIDLVNVLKNEIRDGLLTFRSKQVLELGCGYGLPGIFACLKLGCGYGLPGIFACLKGASTVHFQDPSAEIIRCKTIPNVLANLEHAQDKHGQQQGSPLTPSRQQLPQDIHFYAGEWEELHTVLSVIQEDEVDTSSGVALEFCEDDFLDGCSSQDASNICHETSSRRSRKLSGSRAWERGNETTTGDGGYDILLVNEIPCSASSLQNLYLLVKKCLRPPYGVMYLAARKNYIGSSSAVRQLRSLVDEEGAFGAHLVSEPPEREIWKFFFK</aaseq>

Gene Sequence

<dnaseqindica>1..138#272..334#558..624#709..809#1498..1542#2373..2417#2645..3115#3564..3734#ATGCGGTCACCTTCAATTCTCTCACAGTGCCTGGCCGGCTTCCTGTCGCATGAAAAAGCTGCAGCCCACTGCGTTAATGTCGTGCCCGAGAGAGAGTCACACCCTCCGTCACCAGCAGTCGAGATTGTCCCGTCAAAGGTGGAACTTTTGTCTACACTTTCCTGTTCATTGCAAAGTTGTGTGGCCATGGTTGGCTCTTTGTACATAGATATACTGATGGAAAAGACTGTTATCTACTGACTAATCTCCCATTCTTTACATTGTACTGTAGAATGTTCATCCATACAAGTATGCAGGCGAGAATATTGAAATGCATGGCATGAATATATTTAAGGTGATAATTCTTTCTTAACTCCCTACTTTTTTTTTCATTTTACTAGATTACTTCATAGAACCATGGAATTAGTATTACAGAGTTGAGTTTTTATTCATAGTGGCCATTTATATGGTAGGCAAGTCATGGTAAACATTATTATTTTCCTCTATATAAGCTATATAGCATCCTAATCTTTTGTGGCTTTTGGAATTAATTGTTCTGTGTTTTAACCTTGTTTCAGGGAAAGGTCAGTGTTGTCGATATTGTTGGTCTATCTGGATCAGAGGTTATAACTCCAAAAGGTGAAGGTAAGTGTCATACCCCTAATGATAATCATTTTGTACTGACTACCTAAAACACTGAGAATCTAAAAGTAACGGTTTTTATTATAGGGCCTCTGAAGTGCTGTGAGAGTTCAATTGACCTAGTGAATGTTCTTAAGAATGAGATCCGTGATGGACTATTGACATTCAGAAGCAAACAGGTTTTAGAGGTACAACGCTTTTATGTGTTCAGTACTACTCACTTCGTTCGTGATTGATGAGCGCATATGCAAAACAAAAAAAAATTCAGTATTGATGAGTAACTAATTGGTGTGATTGTTGATTTCTGGCTTCTCATCAATATGGGATCCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATATGATGATCAAAACTGAATGGAGGGAGTACTAGTGAAGCTATGCATTCCTTGACTTCCATCTCTGTCATTGACTGTTTGTTTATTTGTTAAATATGTCATTTATTTAAGTTATCTTGGTACACAAAACTCTAAAGGGTGTGCGCATATGTAAAAGAAAATGGAAGGATATGGCTTAGTCCATGGTTCTGGTGAATTATGATCTGTATTCAGATAATGTTATGTTCTGATTCAACTTGTATAAATTCCAACTTGCACTCCTTAATCCCTTGGACATGGAATTGTTATCTTTATGTTCCAGGAAAAGGTTCTTGACTTATAACTTACTTCTTGGTCTTATTTATTTCTTTGGTCCCTCAGATGCCAAACTCATAGCTTGGTTTGATTAGTTTATGGTACTTGGGCAAACTGTAACAGTCCTTTTTTTTTTCCCAAAATGCAGCTTGGCTGTGGATATGGGCTTCCTGGGATATTTGCTTGCCTGAAGGTACTGTAGTTATCCATGGCATCTCTTCGTTACTTTTATAGAATGTGTTATTGCTAGCCTAATCTTAGATTTACCGTAGCCTTAAATCTTGACTAGCATGAATCCATGTATCTAGTATTACTGTTGCATAGTTGTTGCATCCGTGCACAATGAGTTATATATTAGCTGTGTTCTGCTCTGTGTTTGGCTACTGTGATAACTGACATTTTCTTCTCAAACGTTCTTAGGGAGCTTCAACAGTGCATTTTCAGGATCCGAGTGCTGAAATAATAAGGTGCAAAACAATACCCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTACCATGTTTTGATTGCTCCTTGATCTCGCTGCACAGTTGTTATATGATGATCAAAACTGAATGGAGGGAGTACTAGTGAAGCTATGCATTCCTTGACTTCCATCTCTGTCATTGACTGTTTGTTTATTTGTTAAATATGTCATTTATTTAAGTTATCTTGGTACACAAAACTCTAAAGGGTGTGCGCATATGTAAAAGAAAATGGAAGGATATGGCTTAGTCCATGGTTCTGGTGAATTATGATCTGTATTCAGATAATGTTATGTTCTGATTCAACTTGTATAAATTCCAACTTGCACTCCTTAATCCCTTGGACATGGAATTGTTATCTTTATGTTCCAGGAAAAGGTTCTTGACTTATAACTTACTTCTTGGTCTTATTTATTTCTTTGGTCCCTCAGATGCCAAACTCATAGCTTGGTTTGATTAGTTTATGGTACTTGGGCAAACTGTAACAGTCCTTTTTTTTTTCCCAAAATGCAGCTTGGCTGTGGATATGGGCTTCCTGGGATATTTGCTTGCCTGAAGGTACTGTAGTTATCCATGGCATCTCTTCGTTACTTTTATAGAATGTGTTATTGCTAGCCTAATCTTAGATTTACCGTAGCCTTAAATCTTGACTAGCATGAATCCATGTATCTAGTATTACTGTTGCATAGTTGTTGCATCCGTGCACAATGAGTTATATATTAGCTGTGTTCTGCTCTGTGTTTGGCTACTGTGATAACTGACATTTTCTTCTCAAACGTTCTTAGGGAGCTTCAACAGTGCATTTTCAGGATCCGAGTGCTGAAATAATAAGGTGCAAAACAATACCCAATGTGCTTGCAAATCTTGAGCATGCTCAAGACAAACATGGTCAACAACAAGGAAGCCCCCTTACTCCATCTCGGCAGCAATTGCCTCAAGATATCCATTTCTATGCCGGGGAATGGGAGGAGCTTCACACTGTTCTGTCAGTGATTCAGGAGGATGAGGTGGACACATCATCAGGTGTAGCACTAGAGTTCTGTGAAGATGACTTTCTGGATGGTTGCAGTAGCCAAGATGCAAGCAATATTTGCCATGAAACCTCTTCAAGGCGATCAAGAAAACTATCAGGAAGCCGTGCATGGGAGAGGGGGAATGAGACTACCACAGGAGATGGTGGATATGATATACTGTTAGTCAATGAGATCCCTTGTTCTGCAAGCTCTCTTCAAAACCTCTATTTGCTCGTAAAAAAGGTTTGTTCTCCATACATTTTTTCTTCAGGAAATTCTCGCCATGAGACATCATATATAGACAGCATACAGACAATCACTGCATTGTTATGACTTATGACTAGCATAATATGATAGCGATAAGCGCAGAATGAGTGTAGAGCTCCTCCCTGAGGTCACTCTGCATTGATATGCAGGAGATTAGTATGGGTAGACGAATTTCCTTATATCAGACTTTACAGCAGACCAAGAACTGAGTTTTTTTTTTTTTGGCATTAGACTTAGGAATTGGCTTAGCTTCGCTGCAAGGCTCTTTTCCCCTTGTTTCTGGGACTGTCTTCATCTCATCCTTCTCGTTTATCCAGATAATATCAAATGCATTGTCCGAATTTGCCGTCTGCTCTGGAACAGAACCTGCTTCATAGCCTTAACATGTACTCCGCACTAAAACTTCTGTTCTTGGTTCTTGCAGTGCCTAAGGCCGCCATATGGGGTGATGTACCTTGCTGCAAGGAAGAATTACATCGGCTCGAGCAGCGCGGTGCGGCAGCTCCGATCCCTGGTGGATGAAGAAGGCGCATTTGGCGCGCACCTCGTCTCTGAGCCCCCAGAGAGGGAGATCTGGAAGTTCTTCTTCAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031085