BGIOSGA031111

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Revision as of 09:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031111| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031111, complete gene.| tag = OSJNOA2...")
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Gene Name

BGIOSGA031111

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031111, complete gene.

LocusTag

OSJNOA273B05.1

Ensembl Transcript ID

BGIOSGA031111-TA

Ensembl Protein ID

BGIOSGA031111-PA

Length

3300

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19142254..19145553

Sequence Coding Region

19142254..19142322,19142737..19142843,19143057..19143189,19143315..19143458,19143567..19143725
,19143863..19143936,19144058..19144133,19144251..19144306,19144501..19144588
,19144663..19144803,19144892..19145041,19145320..19145553

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19142254..19145553 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19142254..19145553 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCCGCAAGGATGTCGGGATCCTCGCCATGGATATCTACTTCCCGCCCACCTGCGTCCTCCAGGAATCGCTCGAGGCTCATGACGGCGCCAGCAAAGGGAAGTACACCATTGGTCTCGGCCAAGATTGCATGGCCTTCTGCAGTGAGGTGGAGGATGTCATCTCGATGAGCATGACAGTTGTCACATCCCTGCTGAAAAAATACAAGGTCGATCCAAAGCTGATTGGTCGATTGGAGGTTGGCAGTGAGACAGTCATAGACAAGAGCAAATCCATCAAGACTTGGCTGATGCAGATTTTCGAGGAATGCGGTAATACTGACATTGAAGGAGTTGATTCCAGTAACGCGTGTTATGGTGGGACAGCAGCGCTGTTGAATTGTGTGAACTGGGTTGAGAGTAACTCCTGGGATGGACGCTATGGCCTTGTTGTTTGCACGGACAGCGCGGTTTATGCGGAAGGCCCAGCTCGTCCGACAGGTGGTGCTGCTGCTATTGCAATGCTCATTGGTCCTAATGCTCCTATTGCATTCGAGAGCAAATACAAAGCTTCTCACATGGCTCACGTCTATGATTTCTATAAGCCTGATCTTGCAAGTGAATATCCGGTCGTTGATGGAAAACTATCCCAAACATGCTACTTGATGGCGCTAGACTCATGCTACAGACAGTTTTGTAAGAAGTATGAAAAGCTGGCGGGGAAACAATTCTCAATTTCTGATGCAGATTACTTTGTTTTCCATTCTCCATACAACAAGCTTGTGCAGAAGAGTTTTGCTCGGCTTTACTATAATGATTTCACGCGCGACTGCAGCTCTGTTGACAATGATGCTAAAGAGAAGCTCCAGCCTTTCTCAAATTTGACTGGCGAGGAGAGCTACCAAAGTCGTGACTTGGAAAAGGCTTCACAACAAGTAGCAAAGCCCTTGTATGACATCAAAGTTCAACCATCAACTTTGCTTCCAAAACAAATTGGTAACATGTACACAGCATCTCTTTATGCTGCGTTGGCGTCTGTACTCTATAACAAGCATGCTAGTCTGGATGGCCAACGAATTGTTATGTTCTCGTACGGCAGTGGCTTGACATCCACTATGTTTTCGTTGAAACTTAACAACGGCCAGGACCCCTTCAGTTTATCAAACATTGCTTCAGTGCTTAATGCCACGGAGAAGCTTGAGTCAAGACATATGACCTTGCCCGAGAAATTTGTGGAGACGCTGAAGCTGATGGAGCACCGATACGGCGCAAAAGATTTCGAGACGAGCAAAGACACGAGCTTGTTGCCTCCTGGGACGTTCTACCTCACCAGGGTTGACTCCATGTACCGAAGATTCTATGAGAGGAAGGCCGACGAGGAGATCGCTGCAGCCAAAGCCAAGTACAGTAATGGACATGCCATCAATGGCTATGCCAATGGCCACTAG</cdnaseq>

Protein Sequence

<aaseq>MDGRKDVGILAMDIYFPPTCVLQESLEAHDGASKGKYTIGLGQDCMAFCSEVEDVISMSMTVVTSLLKKYKVDPKLIGRLEVGSETVIDKSKSIKTWLMQIFEECGNTDIEGVDSSNACYGGTAALLNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPIAFESKYKASHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYRQFCKKYEKLAGKQFSISDADYFVFHSPYNKLVQKSFARLYYNDFTRDCSSVDNDAKEKLQPFSNLTGEESYQSRDLEKASQQVAKPLYDIKVQPSTLLPKQIGNMYTASLYAALASVLYNKHASLDGQRIVMFSYGSGLTSTMFSLKLNNGQDPFSLSNIASVLNATEKLESRHMTLPEKFVETLKLMEHRYGAKDFETSKDTSLLPPGTFYLTRVDSMYRRFYERKADEEIAAAKAKYSNGHAINGYANGH</aaseq>

Gene Sequence

<dnaseqindica>1..69#484..590#804..936#1062..1205#1314..1472#1610..1683#1805..1880#1998..2053#2248..2335#2410..2550#2639..2788#3067..3300#ATGGACGGCCGCAAGGATGTCGGGATCCTCGCCATGGATATCTACTTCCCGCCCACCTGCGTCCTCCAGGTCACTCCCTCGATCTCCCTCTCTGCTTTCTTCCTTCTCCTGATCTCGGCATTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGTTTACGTTTCGTTCTTGTGCTCTGGGTTAATCACGGAATCGTGCTGGGAGGTCTCGCTAGATGCGTTCGGCGCCCCGCCTGGATGCGCTGGGTTTTGGGTTTTGGCGCTGGTTGTGGGCGACGCCCATGGTGGTGAGGTGCGCGAAAGCTGAATCTCTTGCGGATTGCGCTGCGGCGTTGCAATGTTGGTGCCACCACCTGTGTGTGTGGGGGTGGGGATCAAATCGACAGTGAGAAATATATATGCTGCCCATTCAGGATGGATGGATGGATGGATGGATGGATGGATGGATGTTTGAATTTTCTCATGGGCGGGTGGATTGGATGCAGGAATCGCTCGAGGCTCATGACGGCGCCAGCAAAGGGAAGTACACCATTGGTCTCGGCCAAGATTGCATGGCCTTCTGCAGTGAGGTGGAGGATGTCATCTCGATGAGGTAATTCAACGGTTTGACTGCTAATCTGTTGTTACTAATGTTTACATATGTGATCAGGAACACTCTTCTACAATGCCCCATTTTTTGTGTTGTAAGGGAGATGTGTACAATTGTGTAGCTTTCAGTGGTCAACTCTACGACACGCAATTTCTTCTCTCAAATAAATACAGTACAGATCTTTTGTCTGAATGCTGAACAAAACGTGCCTTGCAGCATGACAGTTGTCACATCCCTGCTGAAAAAATACAAGGTCGATCCAAAGCTGATTGGTCGATTGGAGGTTGGCAGTGAGACAGTCATAGACAAGAGCAAATCCATCAAGACTTGGCTGATGCAGATTTTCGAGGTCTGTTAATCAAATTGCTATCAATTTCCTCCTAAATTGACAGGCCGTCTGGTTCACTTTTGACCTCACGAGCCTTTCTTTACTGAGTTGTTAGTTTTTTGCTAATCTCTGTTCATAAAATGCAGGAATGCGGTAATACTGACATTGAAGGAGTTGATTCCAGTAACGCGTGTTATGGTGGGACAGCAGCGCTGTTGAATTGTGTGAACTGGGTTGAGAGTAACTCCTGGGATGGACGCTATGGCCTTGTTGTTTGCACGGACAGCGCGGTCTGTCACCCATCATTTTCCTTGATCTTGAGCTACCTAAGTTGATCCTTTCTGTCTCAATTGGAACACTGAGCTCACTGACTACCATCTTGTTATTGAATTGTTCAGGTTTATGCGGAAGGCCCAGCTCGTCCGACAGGTGGTGCTGCTGCTATTGCAATGCTCATTGGTCCTAATGCTCCTATTGCATTCGAGAGCAAATACAAAGCTTCTCACATGGCTCACGTCTATGATTTCTATAAGCCTGATCTTGCAAGTGAATATCCGGTTAGTTTTTGTTCCTCTGTACTATTCCTATTATCTGGAGAGTTTTTTTTTTCTTGCGATGCTATGTACCTGCTGTCCTCTCAAAGTGTCACACTTTATAGCACCATATTATGTTAATAACAGCAGATGCATTGTAGGTCGTTGATGGAAAACTATCCCAAACATGCTACTTGATGGCGCTAGACTCATGCTACAGACAGTTTTGTAAGAAGTGAGCAGCTAAAACTTTGTTACTTTCTCCCTTAAAAAATGTTACTCTCTTTTGCATTTGAACTTTTCTGATTTTTCGGTGGATCAATAATTTTCTACTGCTATTATACTTCCTAAACTAGGTATGAAAAGCTGGCGGGGAAACAATTCTCAATTTCTGATGCAGATTACTTTGTTTTCCATTCTCCATACAACAAGGTGTGAATATGAATATGAAGATTTTCAAAACTTAAATTGCTAGGGAACTTTAGTATTTTTGTTGTTTCTGATTTTGTGACCTGGTGAACTTTGTTTAACTCCCTTGTTTCTTCACAGCTTGTGCAGAAGAGTTTTGCTCGGCTTTACTATAATGATTTCACGCGCGACTGCAGGTTTGTAATATCTTCTCTTCCATTTCCCCCTTTCGAGAAAAGCTGAGCTTAGCTCTCAGATTTGTCTCTCTAACATGGACAGTATTTAGATAGAATTCAATCCCGGAGGGTTTTTCGATTTGTGGATGCAAGTTAGTCTCATTTATTTTCCATGGTGAAATTTCCAAACTAATTTATTTTTAACTGGATACTAGCTCTGTTGACAATGATGCTAAAGAGAAGCTCCAGCCTTTCTCAAATTTGACTGGCGAGGAGAGCTACCAAAGTCGTGACTTGGAAAAGGTCATTATCATCATATTGTAATGTTGTTATGCGATTAATTCATGATCTGATAAAATATTTTGCCAAATTTTTAGGCTTCACAACAAGTAGCAAAGCCCTTGTATGACATCAAAGTTCAACCATCAACTTTGCTTCCAAAACAAATTGGTAACATGTACACAGCATCTCTTTATGCTGCGTTGGCGTCTGTACTCTATAACAAGCATGCTAGTCTGGTAAACCCTATATCTTTAGTTCCCTCTTATATAGTCTTTCACCTGTGTCATTCTTCAATCTGATAGTTAATTACTGTTGATGTTACAGGATGGCCAACGAATTGTTATGTTCTCGTACGGCAGTGGCTTGACATCCACTATGTTTTCGTTGAAACTTAACAACGGCCAGGACCCCTTCAGTTTATCAAACATTGCTTCAGTGCTTAATGCCACGGAGAAGCTTGAGTCAAGACATATGGTGAGCTTTGTCATCCCCTCCATCCAGTACCCCGTCTTCTTTCATCAATCTGTTACTGCCTCAAATTGTCACCTTCCAAGAAATTCTTCTGTTCATAACGCTACAATCTGTAGGATGTTTGCTGTATCACCTAAACTTTTCAGTTGAAGAGCCTTATTAGATCAGTTCTTCCATCTGATGGAGTGCAATCCTACATACTCATTCACTCATTCTGGGCTTATGCTCATATATTATTAATGCTGCATTATAACCTATGTTCTCCAACCTCTTGTGATCAGACCTTGCCCGAGAAATTTGTGGAGACGCTGAAGCTGATGGAGCACCGATACGGCGCAAAAGATTTCGAGACGAGCAAAGACACGAGCTTGTTGCCTCCTGGGACGTTCTACCTCACCAGGGTTGACTCCATGTACCGAAGATTCTATGAGAGGAAGGCCGACGAGGAGATCGCTGCAGCCAAAGCCAAGTACAGTAATGGACATGCCATCAATGGCTATGCCAATGGCCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031111

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA031111&oldid=30315"