BGIOSGA031160

From RiceWiki
Revision as of 09:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031160| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031160, complete gene.| tag = P0569E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031160

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031160, complete gene.

LocusTag

P0569E11.21

Ensembl Transcript ID

BGIOSGA031160-TA

Ensembl Protein ID

BGIOSGA031160-PA

Length

2243

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19874075..19876317

Sequence Coding Region

19874075..19874147,19874238..19874928,19876143..19876317

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19874075..19876317 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19874075..19876317 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCTTGGATCATCACTCGATCTACTTGGATCATGAGTGTGTTCTTCGTCATCCTATCATTCTTTCAAGGGTTGGTAATGGTGGGCGGCGTGACGTTCACGTTCACGAACAGGTGCGGCGGCACGGTGTGGCCGGGGGTGCTGTCGAACTCGGGGAGCTCGGCGCTGGGGACGACGGGGTTCGCGCTGGGCGCCGGCGAGACGCGGTCGCTGGCGGCGCCGGCGGGGTGGTCGGGGAGGTTCTGGGCGCGGACGGGGTGCACGTTCGACGACGACGGCAAGGGCACTTGCGCGACGGGGGACTGCGGCTCCGGCGAGGTGGAGTGCCGCGGCGCGGGGGCGGCGCCGCCGGCGACGCTGGTGGAGTTCACGCTGGGCAGCGGCGGCGGCGGCGGGAAGGACTACTACGACGTGAGCCTGGTGGACGGGTACAACCTGCCCATGTTGGTGGAGGCGGCGGCGGCGGGGTGCCCGGCGACCGGGTGCGTCGTGGACCTCAACCAGCGGTGCCCCGCCGAGCTGAAGGCCGGCCATGGCCAGGCTTGCCGGAGCGCGTGCGAGGCGTTCGGCACGCCGGAGTACTGCTGCAGCGGCGACCACGGCAATCCGGACACGTGTCACCCGTCGGTGTACTCGCAGATGTTCAAGAGTGCGTGCCCTAGGTCGTACAGCTACGCCTACGACGACGCCACGTCGACCTTCACCTGCACCGGCACCGACTACTCCATCACCTTCTGTCCTCGACCCGGCAATCCCAACAGTCAGAAATCGAGCAATGACCCGTCGCCGAGGCCGAAGGATCCGCAGCTGGAGGACGACTCATGGCTGGCGAGCTTGGCCACCGGCGAGGTCGACGGCGCGGCGCCGGCGTCGACGTCGTTGTTGCTGCAAGCCACATTAGCAGTGGCAGTAATGGCTTTGCTTGTGCTACACTAG</cdnaseq>

Protein Sequence

<aaseq>MASWIITRSTWIMSVFFVILSFFQGLVMVGGVTFTFTNRCGGTVWPGVLSNSGSSALGTTGFALGAGETRSLAAPAGWSGRFWARTGCTFDDDGKGTCATGDCGSGEVECRGAGAAPPATLVEFTLGSGGGGGKDYYDVSLVDGYNLPMLVEAAAAGCPATGCVVDLNQRCPAELKAGHGQACRSACEAFGTPEYCCSGDHGNPDTCHPSVYSQMFKSACPRSYSYAYDDATSTFTCTGTDYSITFCPRPGNPNSQKSSNDPSPRPKDPQLEDDSWLASLATGEVDGAAPASTSLLLQATLAVAVMALLVLH</aaseq>

Gene Sequence

<dnaseqindica>1..73#164..854#2069..2243#ATGGCTTCTTGGATCATCACTCGATCTACTTGGATCATGAGTGTGTTCTTCGTCATCCTATCATTCTTTCAAGGTATTGAGATTGGCAATGGTGAATTGAATTCTTGGTTCTTGGGTTTGTTCTGTTTGTAAGTTGATCATGGTGGATTTGGTGTGTGTGCAGGGTTGGTAATGGTGGGCGGCGTGACGTTCACGTTCACGAACAGGTGCGGCGGCACGGTGTGGCCGGGGGTGCTGTCGAACTCGGGGAGCTCGGCGCTGGGGACGACGGGGTTCGCGCTGGGCGCCGGCGAGACGCGGTCGCTGGCGGCGCCGGCGGGGTGGTCGGGGAGGTTCTGGGCGCGGACGGGGTGCACGTTCGACGACGACGGCAAGGGCACTTGCGCGACGGGGGACTGCGGCTCCGGCGAGGTGGAGTGCCGCGGCGCGGGGGCGGCGCCGCCGGCGACGCTGGTGGAGTTCACGCTGGGCAGCGGCGGCGGCGGCGGGAAGGACTACTACGACGTGAGCCTGGTGGACGGGTACAACCTGCCCATGTTGGTGGAGGCGGCGGCGGCGGGGTGCCCGGCGACCGGGTGCGTCGTGGACCTCAACCAGCGGTGCCCCGCCGAGCTGAAGGCCGGCCATGGCCAGGCTTGCCGGAGCGCGTGCGAGGCGTTCGGCACGCCGGAGTACTGCTGCAGCGGCGACCACGGCAATCCGGACACGTGTCACCCGTCGGTGTACTCGCAGATGTTCAAGAGTGCGTGCCCTAGGTCGTACAGCTACGCCTACGACGACGCCACGTCGACCTTCACCTGCACCGGCACCGACTACTCCATCACCTTCTGTCCTCGACCCGGCAATCCCAACAGGTTGGCCAACTCTTTTTTTTTTTTTTTACAATTTTTACCTCTTCGCTTTACTTTGCGTGTGCATTGTCGTGCTCTGCCTATGTCAAAAAAAAAAAAACTCAACCTACCATATACTCTATGAATCTAGACACAGAGTATATCTAGATTTATCGTATTAGGATGTGTCAGGTTAAGTTTTTCTGGGATGGAAGAAATATCTATTAACACTGTTGAATTTTGGCTCCTATGTTTTGTTATAGACCACAGCTAAAATTTAAATTTTAAAATTTAGTTTTAGAGTTGGTTTTGTTGTTTTTTCATCGGAGTTTATTTTTAAATATTAAGTTTTAAATTATTTAAGGATACATATAAAATGTTTACTTTTGTATATTACTCATAAATCGTACGGTTTATATCAACATTAAACCAACCGATGGCAGCCTTGGCTTCAGCAGCTTATCAAGCTCAATTGGTCAAAGGTATGGACTCACATAGGAGATTTTTGTAGCGTAAAAATTTGGTACCTCCTTAATTAGGCAAATTAAGCCTAGCATACACTTTAGTAGGCTTATTTTCATAGGTTATTTGTCCTGTGGTGGTTGAACAGTCGCAAGATACATCATAATATGGAAAAAAAAATGTCAAGTTTAGGGCTCTTCCCTCTATCAAGTGAGGGTTGCTGTGGCGGTGGCCCAGAGCTGAAACATGGACGGACATTATGGCTGGAGAATATGGGCATCTTCCAGATTACTTAGAAAATGCATTTTCGACAAAAGGAGCATCAAACTGAGATGGAGAAAGGAGTGAGGGGGTTGAGAGAGAGACAAGGATAAGCTGTGAGAGAGAAAAGAGAGAGAGCTCTGCTAGCTAGCTTTAAATTGTTCTCCTCTCTTCTTTTGCCGCCTTCGCCTTTGTTCCTTCCCCACCTTGTATGGTCATCAGTCACCCGCCATTGCTAGTGGCTGTCCAGCTTAAAGCTTCCCATGCCTAACTGGACAAAAAATCACCAAAAAATCAAGGGAAAAAAAAAACAAGCCTGGAATCTCTCACATACTATCGCGACACGGTTATCAGGGTAAAATTAACTTGTCTTATGACGGTCTAATCTCTCATACATTAACTAAACATCCTTGATTCTTCTTCTATAGGTTGCATCTTGAATTCCTGATTGATGACATTTTTAATAATCTTTTTGTTCATCAACATATATATCATGTGTCATTCTATCTCTGCAGTCAGAAATCGAGCAATGACCCGTCGCCGAGGCCGAAGGATCCGCAGCTGGAGGACGACTCATGGCTGGCGAGCTTGGCCACCGGCGAGGTCGACGGCGCGGCGCCGGCGTCGACGTCGTTGTTGCTGCAAGCCACATTAGCAGTGGCAGTAATGGCTTTGCTTGTGCTACACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031160