BGIOSGA031224

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Revision as of 09:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031224| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031224, complete gene.| tag = P0489D1...")
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Gene Name

BGIOSGA031224

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031224, complete gene.

LocusTag

P0489D11.25

Ensembl Transcript ID

BGIOSGA031224-TA

Ensembl Protein ID

BGIOSGA031224-PA

Length

4844

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20640914..20645757

Sequence Coding Region

20640914..20641292,20641473..20641636,20641715..20641778,20642043..20642176,20642344..20642427
,20642568..20642642,20642725..20642796,20642894..20642967,20643227..20643279
,20643397..20643506,20643839..20643907,20643989..20644063,20644564..20644656
,20644735..20644814,20644922..20645021,20645195..20645631,20645721..20645757

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20640914..20645757 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20640914..20645757 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGAAGGGCGCGCCACGCAGGCAGCAGCCGGCGCCGGCGGCGCGGCAACTGGCCGTGGCGAAGAAGGGGAAGGCCCCCCCGAAGGCGGCGAAGAGGGCGCCGAAGAAGAAGCAGGAGCTGCTCGAGCCGTCCTCCGACGACTCCGAGCTGGAGCAGCAGCAGGAGCGGCTCCAGGAGGTGGAGGAGGATGAGTCAGGGTCGGACCTCGACGCCCCCTCGGACTCCGGCGCCGAGGAGCTCTCCGACTCCGACGATGCCTCCTTGGAGGGAGGAGACAGCGGCGACGAGGAAGACGATGACGAGGAGGAGGAGGAAGATGACGACGACCCCCTCGCTGACGACTTCCTCGCTGGAAGTAGTGACGACGAAAGTGCCGAAGGAGATGACTCCGGAGTGGATTCAGATGAGTCTGACGACCTTGAGGCTAAGTCACGAGCAATTGATGAAGCGAAGGGGAAGGCAGAAGAAGAAGCTGAGGAGGAACTCAAACTCAATATTAGATCAGAATCTGATGAGTTCCGATTGCCTACAAAGGAGGAGTTGGAGGAAGAGGCACTTAGACCACCAAACCTGCCACATCTTAAAAGGAGGATATCAGAAATTGTCCGGGTACTCTCAAACTTTAGTAAGCTAAGGCAAAAAGATGTGCCGCGAAAGGATTATGTCGATCAACTCAAGACTGATGTAATGTCATACTATGGATACAATGATTTTCTTGTTGAAGCATTTATTGAGATGTTCCCAGCTGTTGAGCTTGTTGAGCTACTGGAATCTTTTGAGAAAAGACCACCTGAGTGCTTGCGGACGAATACATTGAAGACCCGGAGAAGGGATCTTGCTGCTGCTCTTATACCAAGAGGATTTAATCTGGATCCGATAGGGAAGTGGTCAAAGGTTGGTCTGGTTGTATATGACTCCACCATTTCAGCTGGTGCCACTGTTGAATATATGGCTGGGCATTATATGAAACAAGGTGCAAGTTCTTTCTTGCCTGTGATGGCTCTTGCTCCTCAGGAGAAGGAGCGAATTGTTGATATGGCGGCTGCCCCAGGTGGCAAGACTACATATATTGGAGCTCTTATGAAGAATACTGGAATAATTTATGCAAATGAGTTCAATGAGAAAAGGTTGCATGGACTTTTGGGCAACATACATCGCATGGGTGTTACCAATACCATAGTTTGTAATTATGATGGTAAAGAGCTACCCAAAGTTCTTGGGATGAATTCGGTTGACAGAGTTCTTTTGGATGCGCCCTGCACAGGCACAGGGACCATTTGGAAGGACCCACAAATTAAAACGTCGAAGGGCATTGAGGACATCAGAGACTGCGCTTTTGTACAAAAGCAACTCCTGTTAGCAGCTATTGATTTGGTTGATGCCAACTCCAAAACTGGCGGTTACATTGTTTACTCAACCTGTTCGTTGATGATTCCGGAGAATGAGGCAGTTATTGACTATGCCCTTAAAAAGCGAAACGTAAAGCTTGTGCCTTGTGGATTAGATTTTGGACGTCCAGGATTCATCCGGTTCCGAGAGCATCGATTCCATACTTCTTTAGATAAAACAAGGAGGTTTTATCCTCATGTGAACAACATGGATGGATTTTTTGTTGCAAAGCTGAAAAAGTTGAGCAATACAATCCCAGTGACATCCGAATCATCTAAAGTGCCTGAAGAAGCAATTGAGAAGACTGATCCTAGCAGCGACGATCTTCAAGAACAGCCCATTCAGTCAAAAATACACAAAGATGTGAAGAAGATGAATGAAGAGACAACCATCCTTGATGGGGTGACTGAGGACAAACAACAGACACATGATAGGCCTGAAAAGACGCTCAAAAACCATAAGAAGGGTGAGAAGAAACGGAATGGCCCTGGCAGTGGTAAAAAAGAAACACACAACGAAAAAGAAGAGCCTACAAGTGAAAAAAAGCAGCCTGTGTCTGCTAAAATTAAAAAAACTGTTCCCAAGAGAACATCAGGAACCAAAGAAAAGAAGCCAGATACTGACCAAGGAGGGAAGAGGAAAAGGAACTGGATGGTTAGGCGAGAATGGGAAGCTTATAAGAAGTCGAGGAGTAAAAAGGTATGA</cdnaseq>

Protein Sequence

<aaseq>MAKKGAPRRQQPAPAARQLAVAKKGKAPPKAAKRAPKKKQELLEPSSDDSELEQQQERLQEVEEDESGSDLDAPSDSGAEELSDSDDASLEGGDSGDEEDDDEEEEEDDDDPLADDFLAGSSDDESAEGDDSGVDSDESDDLEAKSRAIDEAKGKAEEEAEEELKLNIRSESDEFRLPTKEELEEEALRPPNLPHLKRRISEIVRVLSNFSKLRQKDVPRKDYVDQLKTDVMSYYGYNDFLVEAFIEMFPAVELVELLESFEKRPPECLRTNTLKTRRRDLAAALIPRGFNLDPIGKWSKVGLVVYDSTISAGATVEYMAGHYMKQGASSFLPVMALAPQEKERIVDMAAAPGGKTTYIGALMKNTGIIYANEFNEKRLHGLLGNIHRMGVTNTIVCNYDGKELPKVLGMNSVDRVLLDAPCTGTGTIWKDPQIKTSKGIEDIRDCAFVQKQLLLAAIDLVDANSKTGGYIVYSTCSLMIPENEAVIDYALKKRNVKLVPCGLDFGRPGFIRFREHRFHTSLDKTRRFYPHVNNMDGFFVAKLKKLSNTIPVTSESSKVPEEAIEKTDPSSDDLQEQPIQSKIHKDVKKMNEETTILDGVTEDKQQTHDRPEKTLKNHKKGEKKRNGPGSGKKETHNEKEEPTSEKKQPVSAKIKKTVPKRTSGTKEKKPDTDQGGKRKRNWMVRREWEAYKKSRSKKV</aaseq>

Gene Sequence

<dnaseqindica>1..379#560..723#802..865#1130..1263#1431..1514#1655..1729#1812..1883#1981..2054#2314..2366#2484..2593#2926..2994#3076..3150#3651..3743#3822..3901#4009..4108#4282..4718#4808..4844#ATGGCGAAGAAGGGCGCGCCACGCAGGCAGCAGCCGGCGCCGGCGGCGCGGCAACTGGCCGTGGCGAAGAAGGGGAAGGCCCCCCCGAAGGCGGCGAAGAGGGCGCCGAAGAAGAAGCAGGAGCTGCTCGAGCCGTCCTCCGACGACTCCGAGCTGGAGCAGCAGCAGGAGCGGCTCCAGGAGGTGGAGGAGGATGAGTCAGGGTCGGACCTCGACGCCCCCTCGGACTCCGGCGCCGAGGAGCTCTCCGACTCCGACGATGCCTCCTTGGAGGGAGGAGACAGCGGCGACGAGGAAGACGATGACGAGGAGGAGGAGGAAGATGACGACGACCCCCTCGCTGACGACTTCCTCGCTGGAAGTAGTGACGACGAAAGTGGTAACGCACGGATTACTAATGAATTGATTTAGCTTGAATGAATAGTGTAGTGTGTTTTTCCCATTAAGTCAATTCTATTGTAGAATTCACGCGAGATTGTATAGTAATCGAGAATGTGCAAGCGATGCTGGATTGTACATCTCGGTAATATCTATTGATCCACTATATTGGGTTTTGTAGCCGAAGGAGATGACTCCGGAGTGGATTCAGATGAGTCTGACGACCTTGAGGCTAAGTCACGAGCAATTGATGAAGCGAAGGGGAAGGCAGAAGAAGAAGCTGAGGAGGAACTCAAACTCAATATTAGATCAGAATCTGATGAGTTCCGATTGCCTACAAAGGAGGTTGATTCTTCTGCCTTCTGTTCTGATCCTTACCGTGTTCAGTTTTATTCGCCTCTGAAGCTTTAGTATAATCTGCAGGAGTTGGAGGAAGAGGCACTTAGACCACCAAACCTGCCACATCTTAAAAGGAGGATATCAGAAAGTGCGTTCATCAATATATTTTCTATTACCTAAGTTCATGTTTTTTTTAGATAAAACAGAGGAGCCTCATTTGGGATTTGACACAATATTAGCAAGCTAACGAGATCTAGCTGTTTGCTGGTGTAAACTCTGAGGGCAAATTCAAACTTATTATTATGGCCATCTGCATTGTGATAGAAGCGGTGCATACACACCGTAGGAACGATTTTCTGTTAAGCACTGCACTTTCTAACTTTTCCTTCTATCCATTGGTCTTACCCTCTAGTTGTCCGGGTACTCTCAAACTTTAGTAAGCTAAGGCAAAAAGATGTGCCGCGAAAGGATTATGTCGATCAACTCAAGACTGATGTAATGTCATACTATGGATACAATGATTTTCTTGTTGAAGCATTTATTGAGGTGAGCTTGATCTGCTTATTTCCTTCTGTTAAACTGTGTTTTTCTCCACCGTATCATCAGAGATCATCAGATTGTAATTAGAAATTGTTGTCTGACATGCTTATGGAAACTGTGGTCATCGTTTACCTGCCATCCTAATTAACATTATAAATGTTTTTACTGTGCAGATGTTCCCAGCTGTTGAGCTTGTTGAGCTACTGGAATCTTTTGAGAAAAGACCACCTGAGTGCTTGCGGACGAATACATTGAAGGTAACTAACTATATTTCAGATCAATCTCCTGATATGTATGTATGTGGTGACATGGAATGCATGGTTTGCATCTCGCTTCATTCTTTTCTTTGCTTGCTTAAGATTATCTTTCTTACCTGTTTTGTTTGTGATGTTGGCAGACCCGGAGAAGGGATCTTGCTGCTGCTCTTATACCAAGAGGATTTAATCTGGATCCGATAGGGAAGTGGTCAAAGGTATGCTTTGTTTCAATCTTTCTCCTTTACTCAAGCAAAGTCCAGAATCTCAAAGCAACTCTCCTTGTATTGAAAATGGCAGGTTGGTCTGGTTGTATATGACTCCACCATTTCAGCTGGTGCCACTGTTGAATATATGGCTGGGCATTATATGGTACCTTCTTATCCCCTATCTTTCCTATCTTGGTATGCAGATTATTTCATTTTTTTTTCTCCTTCCATTAACATTGGCATTTAAAATGTGACTACAGAAACAAGGTGCAAGTTCTTTCTTGCCTGTGATGGCTCTTGCTCCTCAGGAGAAGGAGCGAATTGTTGATATGGCGTAAGATGTTTTCCTTTCTCTCATATACTTATGGCAATTGTTCATTTATTTCATGACTTCAAAGTTAACATGTGAACCTTTTTTTGTGATGTACACGTGATTCGAATATCCCATGCATGTAACCTCGTCATGCTACCCTGACATAACACTTCTCTGCTTCGAAATTTGATGTTAATATTTGATTGAATTATTCATTTTGAACTTGTGAAATTCATGTCCTCATCTCTCATCAGAAACTGAGTGTTTATCTTGGTTCCAGGGCTGCCCCAGGTGGCAAGACTACATATATTGGAGCTCTTATGAAGAATACTGGTCAGTGTGCTTTGCCTGTTTTTAGTACATTTTGCTCCTATAGGAGTAAGTTTGTTTTGTGCACTCTCCTGGCAATTGAATTGCAAACATACTGTTTTCTTCATCTGTCATGCACAGGAATAATTTATGCAAATGAGTTCAATGAGAAAAGGTTGCATGGACTTTTGGGCAACATACATCGCATGGGTGTTACCAATACCATAGTTTGTAATTATGATGGTAAAGAGGTGAGTAAACCGTATAAATACTGTTAACATGGTGCTAATAGTTGTGTTTCATGGACTATCTAATGGCAAAAACATAATCAACTAACTACATGCATTAAGAAAGAATATTGATTTGTGGTGTTTTTCAAGTATAATCTAACAATTTGTACAATATGATGACAGAAATGAATATATGTTCATAAGTACCGTTTCTATAATCTTTTGCTAACTTTTGGTCCATTTTAATCTTGCAGAAAATAAATGTCAAGTCCTGATTTTTTTTTTTTGCTTGAATTGGGTGTAGAATATTCTCATTGGAAATCTATATTGTGATAACATACTTTTCATTTCAGCTACCCAAAGTTCTTGGGATGAATTCGGTTGACAGAGTTCTTTTGGATGCGCCCTGCACAGGCACAGGGGTAAGCATCATCTACTTCATTTAAGCTCCTGGTCCCAATATATTCTCTTTTATTTAACAGATGTTTACTTTTTCTATATAGACCATTTGGAAGGACCCACAAATTAAAACGTCGAAGGGCATTGAGGACATCAGAGACTGCGCTTTTGTACAAAAGGTGCATTCTTGTATAGGGCTTCTTTAAATCGAACCTGCCTGCAGTTTTACACAATTCTTAATGCAACCCTTCTGTTCGTAAGGAAAAGAACTGCATTCCACGTGCGTTATTTCAATTTGATTCTTAACCAAGTAACTTGCTCAAAACATTACCCGTCCACCCTCATGTTCTTGAGTTGGTTTCAAGAGTCATTTCAAAGCAATTTATATTGTGCGGTTCAGTTGTGCTCTTACATGGAAATAACATATGAACCCCAGAGCTGCTATGTTCTATTTGCTCAATATTTATGGGTTTTGTTTGCTTATCCTTTATTTGTTAGGCTATGTGATTGTGTTCAATTATTATTTGGTGCCATATTTTTTGTTTGTTAGGCTATGTAATAATTTAGTGCATTCTGCTCAATCTTTCTGGGTTGTCTGCCTAACCTTTATGCTCTATATTTGTTTGTATGCATATCATATACCACTATTTAACAATCTAACTGATGAATTGTTCTACAGCAACTCCTGTTAGCAGCTATTGATTTGGTTGATGCCAACTCCAAAACTGGCGGTTACATTGTTTACTCAACCTGTTCGTTGATGATTCCGGAGGTAAGTTCATTGGCCTTGTGAGTTGCCATAGCTCAATGATACTCAACTTAGTTCCTTGAACCTCTCTTCATCTTGCAGAATGAGGCAGTTATTGACTATGCCCTTAAAAAGCGAAACGTAAAGCTTGTGCCTTGTGGATTAGATTTTGGACGTCCAGGGTATTGTAAATCTGTCTCCCCTCATGAAGAATGTGTTGCATTTTGTGTCTCCCCTCATGAAGAATGTGTTGCATTTTGTCTTATATTGTTTTATGTTTATCCTACAGATTCATCCGGTTCCGAGAGCATCGATTCCATACTTCTTTAGATAAAACAAGGAGGTTTTATCCTCATGTGAACAACATGGATGGATTTTTTGTTGCAAAGGTAACACCAATGCTATCCTTCAGGGTGAAATATAAATATATTATTTGCAAATAGTTTGATCCTGTGCTTATTCCATTTATTAGGATGTGTTGAGTGTACTCTATGATGAACAGTTTAATTTTCTTTGCTTGATATAGACATAACATCTGATTATGGCACTTGCTTTCACACAGCTGAAAAAGTTGAGCAATACAATCCCAGTGACATCCGAATCATCTAAAGTGCCTGAAGAAGCAATTGAGAAGACTGATCCTAGCAGCGACGATCTTCAAGAACAGCCCATTCAGTCAAAAATACACAAAGATGTGAAGAAGATGAATGAAGAGACAACCATCCTTGATGGGGTGACTGAGGACAAACAACAGACACATGATAGGCCTGAAAAGACGCTCAAAAACCATAAGAAGGGTGAGAAGAAACGGAATGGCCCTGGCAGTGGTAAAAAAGAAACACACAACGAAAAAGAAGAGCCTACAAGTGAAAAAAAGCAGCCTGTGTCTGCTAAAATTAAAAAAACTGTTCCCAAGAGAACATCAGGAACCAAAGAAAAGAAGCCAGATACTGACCAAGGAGGGAAGAGGAAAAGGAACTGGATGGTTAGGCGAGAATGGTGAGAGTACAATGCTCTTTTTTCTTTTATGCCTGTATTTGATTGTTTTCTTTGCTTTATCCTAATATGGTGTAATTATCTTACAACAGGGAAGCTTATAAGAAGTCGAGGAGTAAAAAGGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031224