BGIOSGA031226

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Revision as of 09:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031226| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031226, complete gene.| tag = OsI_323...")
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Gene Name

BGIOSGA031226

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031226, complete gene.

LocusTag

OsI_32307

Ensembl Transcript ID

BGIOSGA031226-TA

Ensembl Protein ID

BGIOSGA031226-PA

Length

6648

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20650003..20656650

Sequence Coding Region

20650003..20650073,20652231..20652296,20652565..20653952,20654795..20654991,20655096..20655303
,20655526..20655622,20655711..20655861,20656339..20656650

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20650003..20656650 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20650003..20656650 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTTTATGGGTCGCCGGAGATCCGGCGCACAGTCACCGATCTTGAGGACGACGACGGAACCAGCGACGTGCAAGTGGAGCAAGGGCATTCAATCCCTGCTCCGGACACCCGTGGAAGTACAATCGACAATATTCAAGCATATGCTCAACAACAACTACGCGATTACGAGCTAAAACATTGGCTCACGAAAAGGAAGAAAGGCTTGGTTTCCATGGATCGATCAGATGCTTTCATCTACGTCATCATCATGAGCGTCGTCGTTCTCCTCATACCGCAGCCGTGTTCAGCCAACGACCGGCTTGTCCCCGGTAAGCCGCTAACCTCTGATGGCACCGTTGTCTCCGACGGCGGCGCCTTCGCCATGGGCTTCTTCTCCCCCTCCAACTCCACCCCCGACAAGCTCTACCTCGGCATATGGTACAACGACATCCCTGTGCGCACCGTGGTCTGGGTCGCCAACCAAGAAACCCCGGTCACAAATGGCACGACGCTGTCCCTGACCGAATCCTCCAACCTCGTCGTGTCAGACGCCGACGGCCGCGTCCGCTGGGCGACCAACGTCACCGGTGGCGCCGCCGGCAACGGCAACACCACCGCGGTGCTGATGAACACCGGCAACCTCGTCGTCCGGTCACCGAAAGGCACCATCTTTTGGCAGAGCTTCGAGCACCCGACTGACTCGTTCCTGCCCGGGATGAAGCTCGGGATGATGTACGAGACGCGCGCCGCCGATCGGTTGGTGTCGTGGAGGGGCCCCGGCGACCCGTCGCCGGGGAGCTTCTCGTACGGCGGCGACACGGACACGTTCCTCCAGGTGATCTTGTGGAACGGGACGCGGCCGGTGATGAGAGACGGCCCGTGGACAGGCTACATGGTGGATAGCCAGTACCAGACGAACACCAGCGCCATCGTCTACCTCGCGATCATCGACACCGACGAGGAGATATACATCACGTTCAGCGTCGCCGACGACGCCCCGCACACCAGGTACGTGCTGACCTACGCCGGCAAGTACCAGCTCCAGAGGTGGAGCAGCGGCTCGTCGGCGTGGGTGGTGCTCCAGGAGTGGCCGGCCGGGTGCGACCCCTACGACTTCTGCGGCCCGAACGGGTACTGCGACAGCACGGCGGCGGAGGCGCCACTTCCGACGTGCAGGTGCCTCGACGGCTTCGAGCCGGCGAGCGCGGCGGAGTGGAGCAGCGGCCGGTTCTCGCGGGGTTGCCGGCGGAAGGAGGCGGTGCGGTGCGGCGACGGCTTCTTGGCCGTGCAAGGGGTGCAGTGCCCCGACAAGTTCGTGCACGTCCCGAACAGGACGCTGGAGGCGTGCGCCGCGGAGTGCAGCGGCAACTGCTCGTGCGTGGCGTACGCGTACGCCAACCTGAGCAACAGCAGATCAAAGGCCGACTCGACGAGGTGCTTGGTGTGGTCAGGGGAGCTGATTGACATGGCAAAAGTTGGTGCACAAGGGCTAGGCAGTGATACGCTCTACCTCAGGCTTGCAGGCCTTCAGCTTCATGCGGCATGCAAGAAAAGAAATCGAGAAAAGCACAGAAAGCAAATTTTGTTTGGCATGAGTGCAGCTGAAGAGGTTGGGGAAGGAAATCCTGTCCAAGATCTTGAATTCCCATTTGTAAGATTTGAGGATATTGCTCTAGCAACTAACAACTTTTCGGAAGCACATAAAATTGGTCAGGGAGGTTTTGGAAAAGTCTACAAGGGAATGCTAGGGGGTCAGGAAGTCGCTATTAAAAGGTTAGGTAGGAATTCTCAACAAGGAACGGAGGAATTCAGGAACGAAGTTATTCTTATTGCGAAATTACAACATAGAAATTTGGTTCGCATACTTGGTTTTTGTGTTGAGGGAGATGAAAAGCTACTAATTTATGAGTATTTGCCTAACAAAAGCTTAGATGCAACACTTTTCAATGCAGAGATGAAACCTAAGATAGCAGATTTTGGCATGGCAAGGATCTTTGGTGATAATCAACAGAATGCAAACACCCAACGTGTTGTTGGAACATATGGTTATATGGCTCCCGAGTATGCAATGGAAGGTATCTTTTCTACTAAATCAGATGTCTACAGCTTTGGTGTGTTATTGTTGGAAGTTATAACCGGTATGAGGAGAAATTCCGTTAGCAACATCATGGGCTTTCCAAACCTCATAGTCTATGCATGGAACATCTGGAAGGAAGGGAAGACCGAGAATTTGGCAGACTCATCAATTATGGATAGTTGCTTACAAGATGAAGTTTCACTTTGCATCCATTTAGCTTTATTGTGTGTTCAAGAAAACCCAGATGACAGGCCACTTATGACATTTGTTGTGTTCATCCTAGAGAATGGAAGTAGTACTGCACTTCCAACCCCAAGTCACCCTGCCTACTTTGCACAGAGGAGTGATAAAATGGAAATGGATCAATTGAGACATAATATTGAAAATTCAATGTATGCTCTCACGTTAACAGATGTAGAGGGGCGGTAG</cdnaseq>

Protein Sequence

<aaseq>MAVYGSPEIRRTVTDLEDDDGTSDVQVEQGHSIPAPDTRGSTIDNIQAYAQQQLRDYELKHWLTKRKKGLVSMDRSDAFIYVIIMSVVVLLIPQPCSANDRLVPGKPLTSDGTVVSDGGAFAMGFFSPSNSTPDKLYLGIWYNDIPVRTVVWVANQETPVTNGTTLSLTESSNLVVSDADGRVRWATNVTGGAAGNGNTTAVLMNTGNLVVRSPKGTIFWQSFEHPTDSFLPGMKLGMMYETRAADRLVSWRGPGDPSPGSFSYGGDTDTFLQVILWNGTRPVMRDGPWTGYMVDSQYQTNTSAIVYLAIIDTDEEIYITFSVADDAPHTRYVLTYAGKYQLQRWSSGSSAWVVLQEWPAGCDPYDFCGPNGYCDSTAAEAPLPTCRCLDGFEPASAAEWSSGRFSRGCRRKEAVRCGDGFLAVQGVQCPDKFVHVPNRTLEACAAECSGNCSCVAYAYANLSNSRSKADSTRCLVWSGELIDMAKVGAQGLGSDTLYLRLAGLQLHAACKKRNREKHRKQILFGMSAAEEVGEGNPVQDLEFPFVRFEDIALATNNFSEAHKIGQGGFGKVYKGMLGGQEVAIKRLGRNSQQGTEEFRNEVILIAKLQHRNLVRILGFCVEGDEKLLIYEYLPNKSLDATLFNAEMKPKIADFGMARIFGDNQQNANTQRVVGTYGYMAPEYAMEGIFSTKSDVYSFGVLLLEVITGMRRNSVSNIMGFPNLIVYAWNIWKEGKTENLADSSIMDSCLQDEVSLCIHLALLCVQENPDDRPLMTFVVFILENGSSTALPTPSHPAYFAQRSDKMEMDQLRHNIENSMYALTLTDVEGR</aaseq>

Gene Sequence

<dnaseqindica>1..71#2229..2294#2563..3950#4793..4989#5094..5301#5524..5620#5709..5859#6337..6648#ATGGCGGTTTATGGGTCGCCGGAGATCCGGCGCACAGTCACCGATCTTGAGGACGACGACGGAACCAGCGAGTACGGAGAGACCAGCTGAGTCGGAGTTTTATTCTCCGAATCCCCCAGGCCATCATGAACCGTTGGATTAAAACCTGCGGCTAGGATCCGAGACTTCTTCTGCATACCTGTGTTGTTTCTTCTGAAGATTGAGGGCGTCAGTTGATAAATCATCACATTGGATGATTGGATCTGCGGTAATTAAGTTCCTTCCCCTTGTGAGTTTTGTCCTTCTGATAGAATTACCAGGTCTCGTTCTAATTCTTTTTCTTTCAGTGGATGATCAGTCCTTTTGTTTTTCAGAAAATAGGTCATCAGGGACCTAGCTTTTACAGAAGGCCATTAAAATCAGTCTTCGCTTCAAGTAACTGACAGCAGACAACACTGAGAAATTCAACTCGATCAATACTCCTCCTTGCTCTGTGCAGATATGGCGAAAGCAGTTCTGAATTAGGCACCGCATTACGGCATGGTAATGGCACAAGCGCTGAATATATGAATTCCCTTTTGTGAATGTTGTACTTTTATCCCTCTGACAGAACCAAGTGATCAAGTGAGTCATGTTCGGAATTCTTTCAGTGATGATCAGTGCCTATAAGGTAGAGCAAGCTCCGGGAGACGAACCTATGTCGGGGTTCTCACAAATGGTGACCTCCCAAAGTTCCTCTTAACTTCGTTTTTAAATACTAATTGATACTCCCTCAGTCCCACAATATAAGGGATTTTGATTTTTTGCTTTCAACGTTTGACCACTCATCTTATTCAAAATTTTTTAAAATTATTATTTATTTTATTTGTGACTTACTATTATCTACCGTACTTTAAGTACAACTTTTCGTTTTCTATATTTGCAAAAAAAAATTAAATAAGACGAGTGGTCAAATGTTGCAATTAAAAACTCAAAATCCCTTATATTGTGGGACGGAGGGAGTAGTTATTTGAAATTTTTAATCAAAAAAATAGTTATTTGAAATTAGAAAGTAGCTTCGGTAACGAGCTGATCCGACGTGACTCTCCAAGAAACATAATGCCATCTTGAAAACTTGCTACTCCACATATGGAGGATAGAGACCGCGGGCGAAAGTTACAACGTCCGCAGCTTCAGATTTTAGGCAAATCCCCTTCAGAGAAAAGAAGAGCCGAATTCGGTCTGTCTGTGGAACATAAATTTGCGGAGTTGCAGTACAAGCACTGCTCGGGTTTTTTTCTGCCACTAGGAATGATAGTGCCATTTAACAACCGCAATCTTCGGTCTCAGACAACAGCAAGACTCTCATGCATCGTTTGAAATACAGGTAATTGGATAAATTTTCTGGAAGCTAATTAAACTAACTCCAATAAGACCCCTGCAAAATTATTGTGTTCCAAAGGAGGGCTCAGTTTATTATAAGGTCTAATTTCTAAAATTAGCTTCGGCTTCTAAGCCAAACTATGTCAAAGCACACGCTAATACTGCGCCCCTCCTGCAGCAAAGTGAAATTCAAACTACTTTTTTGGTCTTTTAGAAATATATTTTTTGCTGCACTGTTGGTTGAAGCTTGCATGATAAGAACGTAAGTTGATTTGAAATTGTCCACGCCTGCGTGCATAATAGTCCACATTTTGGACCAACGGTCATTTCGAGAGAATGACACCACTTAACATAGATACTTCCGTCTCTAAATATTTAACAATGTTAATTTTTTAAACATATTTAACTGTTTGTCTTATTAAAAAATTTAAGTAATTATTAATTATTTTCCTATCATTTGATTCATTGTTCAATATATTACTACTACTTAAGTTGAATAATATTAAAAAAAATTGAATAAGACGAACGGTCAAATATGTTTAAAAAAGTTAATGGCATCAAATATTTAGGGACAGAGATAGTAGAAAAGTAAGAAACGATAGGACACTGAGAGCTGACAATGGCATAGCAGCTTCGACTTCATGCAAACGCTCATCATCGTTGTCGAGCCTGCAATAGTGACGCAGCAGCTCCGACTTCACAATGAAGGAGTGTCATCATTTTCAATCTTGCCGTAAAAATCGTATTTATGGAAATAGAATCAATATAATTTACAAAATACAGTTTGTATTTATGAAAACATAAGCAAGAGTTACACATCAAAATACATCTCGATAGCACCGTCACATGTAATCATTAACCAAGCGATTGATGAAGTTTGGCTATAGCGTGCAAGTGGAGCAAGGGCATTCAATCCCTGCTCCGGACACCCGTGGAAGTACAATCGACAATATGTAAGTCGTGACATATACCTCCAACCCCTTTCCCCTAGCAGCCCACCCCTCCCCTCTCGCTTTTCTATTTATTTTCCTTTTGTAATCTCCTAGCTTTAGACTATTCCCCTACTTAATACGAACACACCCCGCGGGGTTTAAAAAAATACATCTCGACATTTCTAGCTGGTCCGCTGAAATTGCACGAGAAAATCTACCCGTGATACGAAAACTATACGCCGGTTAGCTACGCACAGACTAGTACATTTGAATTTCCACAAATTTATAGTCAAGCATATGCTCAACAACAACTACGCGATTACGAGCTAAAACATTGGCTCACGAAAAGGAAGAAAGGCTTGGTTTCCATGGATCGATCAGATGCTTTCATCTACGTCATCATCATGAGCGTCGTCGTTCTCCTCATACCGCAGCCGTGTTCAGCCAACGACCGGCTTGTCCCCGGTAAGCCGCTAACCTCTGATGGCACCGTTGTCTCCGACGGCGGCGCCTTCGCCATGGGCTTCTTCTCCCCCTCCAACTCCACCCCCGACAAGCTCTACCTCGGCATATGGTACAACGACATCCCTGTGCGCACCGTGGTCTGGGTCGCCAACCAAGAAACCCCGGTCACAAATGGCACGACGCTGTCCCTGACCGAATCCTCCAACCTCGTCGTGTCAGACGCCGACGGCCGCGTCCGCTGGGCGACCAACGTCACCGGTGGCGCCGCCGGCAACGGCAACACCACCGCGGTGCTGATGAACACCGGCAACCTCGTCGTCCGGTCACCGAAAGGCACCATCTTTTGGCAGAGCTTCGAGCACCCGACTGACTCGTTCCTGCCCGGGATGAAGCTCGGGATGATGTACGAGACGCGCGCCGCCGATCGGTTGGTGTCGTGGAGGGGCCCCGGCGACCCGTCGCCGGGGAGCTTCTCGTACGGCGGCGACACGGACACGTTCCTCCAGGTGATCTTGTGGAACGGGACGCGGCCGGTGATGAGAGACGGCCCGTGGACAGGCTACATGGTGGATAGCCAGTACCAGACGAACACCAGCGCCATCGTCTACCTCGCGATCATCGACACCGACGAGGAGATATACATCACGTTCAGCGTCGCCGACGACGCCCCGCACACCAGGTACGTGCTGACCTACGCCGGCAAGTACCAGCTCCAGAGGTGGAGCAGCGGCTCGTCGGCGTGGGTGGTGCTCCAGGAGTGGCCGGCCGGGTGCGACCCCTACGACTTCTGCGGCCCGAACGGGTACTGCGACAGCACGGCGGCGGAGGCGCCACTTCCGACGTGCAGGTGCCTCGACGGCTTCGAGCCGGCGAGCGCGGCGGAGTGGAGCAGCGGCCGGTTCTCGCGGGGTTGCCGGCGGAAGGAGGCGGTGCGGTGCGGCGACGGCTTCTTGGCCGTGCAAGGGGTGCAGTGCCCCGACAAGTTCGTGCACGTCCCGAACAGGACGCTGGAGGCGTGCGCCGCGGAGTGCAGCGGCAACTGCTCGTGCGTGGCGTACGCGTACGCCAACCTGAGCAACAGCAGATCAAAGGCCGACTCGACGAGGTGCTTGGTGTGGTCAGGGGAGCTGATTGACATGGCAAAAGTTGGTGCACAAGGGCTAGGCAGTGATACGCTCTACCTCAGGCTTGCAGGCCTTCAGCTTCATGCGGGTAAACACACCGTTAATTTTTAGTATATTTTTTTCTAAAATCAATTACTACATCCGTTGTTGTTCATAGGACGTAGGAGTACTTTGATGTCTAAAAGTCAAATTCTCTATAGATTTTTATAAAAATTCCTCTATGATGAGTCTACCAAGAAATTCATGTTTTAGACTAACGAGGTAATCCCTCCGTCTCACAAAAAGAGCAATCCTAGAATCCCAATGCAAATTTAGTGAAGAGTAAAGATGACCAAAATGCCCCTCATTATTAAAAAAAAGTAGTAATATTGATAGGTAGGTAAAGGGTATTTAAGGAAGAGTAAAGATGACCAAAATATCCCTCATCATTGAAAAAAAGTAGTAATATTGATAGGTAGGTAAAGGGTATTTAAGGGATAAAACTTTCTCGTTTTATGTAATGAGAGTAGGTAGGATGGTAGAAGTTTTTTGTGGGATAAAATTCAAACTCCAGAAGTTGAGTTTTGTCTTATAGCTATCTAAAATATATTATTATACGATAATAAATGGATGGTTAAAGTTTAGTCTTAAGTACTTTTTGAAAGTCCTATACAAATCAACAGAAAAATATTATATTTCTATTCCACCTCCAAATTTAATATATATTTTTTTTTGAAAAAACTACTTAAACACTAAAACTTTGCACAGGTGGAAGGACGAAGAGCAAAGCAGTCAAGATTGTGCTTCCAGTGTTAGCAAGTAGTATTCTGGTAATTCTATGCATTTCTTTTGCATGGTTCAAAATGAAAGGTATATTTCGTGTTTTTTTCTCTTGTGAACATATGTTATTCTTAAAAGCTGATGACTATAATTAAGATTGATCTTGTTCAGCATGCAAGAAAAGAAATCGAGAAAAGCACAGAAAGCAAATTTTGTTTGGCATGAGTGCAGCTGAAGAGGTTGGGGAAGGAAATCCTGTCCAAGATCTTGAATTCCCATTTGTAAGATTTGAGGATATTGCTCTAGCAACTAACAACTTTTCGGAAGCACATAAAATTGGTCAGGGAGGTTTTGGAAAAGTCTACAAGGTAATTCATTCAGTAGTACCTTCCTCTTATATGTTCTAGGTTATTCAATAATGTATTTTGTATGTCATATGCTCAAATCTAATTTCTTTTCTCACAATTTAAAGGGAATGCTAGGGGGTCAGGAAGTCGCTATTAAAAGGTTAGGTAGGAATTCTCAACAAGGAACGGAGGAATTCAGGAACGAAGTTATTCTTATTGCGAAATTACAACATAGAAATTTGGTTCGCATACTTGGTTTTTGTGTTGAGGGAGATGAAAAGCTACTAATTTATGAGTATTTGCCTAACAAAAGCTTAGATGCAACACTTTTCAGTAAGTTCTTTTGACGCATCTTGCATAAGTTTTAAAGTATCTAAACAATAATAGAATGCTTACATTTGTTTTCATGTACAGATGGTTCAAGAAAATTGTTGCTAGATTGGACAGCACGGTTTAATATAATCAAATGAGTGGCAAGGGGACTTCTTTATCTACACCAAGACTCAAGATTAACCATAATTCATAGAGATCTCAAAGCCGGTAATATTTTGCTAGATGCAGAGATGAAACCTAAGATAGCAGATTTTGGCATGGCAAGGATCTTTGGTGATAATCAACAGAATGCAAACACCCAACGTGTTGTTGGAACATAGTAAGTAGTTATTTGCATTAATTGATTAAATTGAGTTTGATTGGTTTAAAGTCTTCTCCAGTAACTCTTACAAGTGAAACGGTAACAGTGGTTATATGGCTCCCGAGTATGCAATGGAAGGTATCTTTTCTACTAAATCAGATGTCTACAGCTTTGGTGTGTTATTGTTGGAAGTTATAACCGGTATGAGGAGAAATTCCGTTAGCAACATCATGGGCTTTCCAAACCTCATAGTCTATGTGAGTATACGTCCTTTCTGAAGTTCTAATATAGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTACGTTGCTTCGGAAGGTATCGATCGGATAGCCATCACATTTTCTAATGTGAATTGGGTACTTGTTGTTACCTACTTAGTAAGCTAACAGGAGGTGGCACAAATTAACACTATATTTTTGTACCTTCAGTATCTTATTAAAAACCATAAAGTAACTTTTAAATTAAAACTAGTGAACTTTGAATTTTATTAAAGGTTCAGCGGGACTAAAATGGTCTGGGATTTTGAAAAATTTTGAGTTCTACAATCCAAATGATACTTTTGATTGTTCAGGCATGGAACATCTGGAAGGAAGGGAAGACCGAGAATTTGGCAGACTCATCAATTATGGATAGTTGCTTACAAGATGAAGTTTCACTTTGCATCCATTTAGCTTTATTGTGTGTTCAAGAAAACCCAGATGACAGGCCACTTATGACATTTGTTGTGTTCATCCTAGAGAATGGAAGTAGTACTGCACTTCCAACCCCAAGTCACCCTGCCTACTTTGCACAGAGGAGTGATAAAATGGAAATGGATCAATTGAGACATAATATTGAAAATTCAATGTATGCTCTCACGTTAACAGATGTAGAGGGGCGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031226