BGIOSGA031271

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Revision as of 09:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031271| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031271, complete gene.| tag = OsI_323...")
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Gene Name

BGIOSGA031271

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031271, complete gene.

LocusTag

OsI_32398

Ensembl Transcript ID

BGIOSGA031271-TA

Ensembl Protein ID

BGIOSGA031271-PA

Length

5303

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21170590..21175892

Sequence Coding Region

21170590..21170651,21171987..21172110,21173941..21174988,21175126..21175892

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21170590..21175892 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21170590..21175892 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCTGAATCTCCTTGAAATTGTTGGAGGTCGTCTGTGTCGTAGGCAGCAGCTTTGCAGAAATATTCGGGATGTAAATTTGTTGGCAGAAATATACCGTTGTCTCACACAACCGTTGCGCAAGAATGACACGGGCGGTCTCGCGCAAAAATCAAGGAATGAGCGAGAGCGGACGGCTTGCCTGGATCCTCTACCGCGACGCGGGGTTGGACGACGACTCCGAGGACGACTTACCCGCGGGATTTTGGGTGGTGGCGGCGGCGGGGGCGGGGGCGGGGGCGGTGGTGGTGATGGTGGCGGTGGCGGTGGCGGTGGCGGGGCCGTGGAGGAGTTCGCGGCCGAAGAGGCAGCCATCCCCATCCATGTCGCCGGCAGCGTCCAGGGCCAATACATCGAGGTGACTTGTTTGGCCGACATCATGTCCGTGATAAATTTCCCCCGGCTCTACCGCGAGTTCGACCGTATTTGCGTGCTTGAGTTCCCATTCGTCGACGCCCCGCACTTGCTGGAGACTATTTTGGAGGTTGGCAAGCCAGGAGAAGAGAAAACCTGGCTGATTGGGAATTTGCCTGAGCTTATTGAGATTACTAGATTCAGAGTTGCTTTTCTCCGTGTTTCATCCTCACTTGAGCGGTTGCTGAGCCTGTGGAAGACCCATGGAATACTTGAGATCGATTGGGATTTCATAGGGGCAGTTGAGCATGCGGTAGCTGCGCTCCACCCTCTCAGCGATCATCAGCCCGAAGCTCTGCGCAATGGTGTGCTTGGGCTCCTAGAGCGCCTCAAGTTGTTGTTCCCTGTGCAGCCTGACGATGCTGACAGCACTGACATCATAGCGTCGACAAAACTAGTGTCTGATGTGGAGCTTATTGTCAAGGATATGTCCTTACTTGGGCTCATCCCTATCAAGTACCCTGCTCTAAGGGACCAGTCTGCATTTCTGCCGGTGTCGGTAGTGGAGAACCAGCCCGACGTCCAGGAATCCCCATACATTCGGATCCGCAGCTATAATGAGCTTCTGCTCACGATGGACTCCCAGTTCCCCATTGATATCTGCATTGTCAGCTTCAAGTTGTCCGACGCGACAAAAGTGTCCCATAGGGTGGACAAGGCAATTGAGAAGGGATGGTGGGTCGGCAACATAGATATCCTGCACACGACGAGCCACTTCAGATCCATAATTTCTCGGATTTCTGAGTCCATCTCAAATTTGCAGATGACATTGCTAGAAGTTCCCCCCATTCCTGCTGACATAATCACAAATCAAATGGAATACCCCAATGAACTTGTGAAGGGAATACCTGCTAAGCTGGACAAGTTACTTTTTGAGGCCAACACTATCCAAGGCTTGAAGGTTCAGTACCCAGATCCTGAAGGCCTGAAGGTGAACGGTCTGTCCGATATCACGCCGGTGGCCAACTCCCCCCAGCTGTACCTCCACCTGAAACACATGTGCATCCTTGGGGTCACCTTCGCCCATGCCCCGTACATGCTGGAGCAAGTCCTCAAGGTTGGCAAGGAGAGAGAAGTTAACAGATGGTTGGTTGGGAACTTGGCAGAGCTTAAGGAGATCGCGAGTTTCAGGACTGCATTCCTATGCTTAGTTTCTTCCCTGGAGAGCCTCTCGAAGAAGCACCAGATACTTGAAGACGACTGGAACATGATTGCCGCCGTCAAGGATGCGGTGGCTCGCCTTCCCCCGCTCAGCGATCGCCAGCCTGAGGCTCTTCGTGCTGAGGTGCTGAAGCTCCTAGAGCGCCTCGAGTCGACGCTCCCCGTGCAGCCTGGTGGCTCCGATAGCTCTGGTGCCAATTCCCTGGAGGTTCTATCCTCAACTCTAACGTCTGATGTGGGGGCAATCTTGAAGGACATGTACGAAGTTGGACTCAGGCATATCGAGTACACTCAAGTGGATCTTCCAGCTTTCATGGAACTGGAGGATGAGGAGGAGAACCAGCCAGAATATCCCGACACAGATCATTTGCCTCCATCCCCATAG</cdnaseq>

Protein Sequence

<aaseq>MTLNLLEIVGGRLCRRQQLCRNIRDVNLLAEIYRCLTQPLRKNDTGGLAQKSRNERERTACLDPLPRRGVGRRLRGRLTRGILGGGGGGGGGGGGGGDGGGGGGGGGAVEEFAAEEAAIPIHVAGSVQGQYIEVTCLADIMSVINFPRLYREFDRICVLEFPFVDAPHLLETILEVGKPGEEKTWLIGNLPELIEITRFRVAFLRVSSSLERLLSLWKTHGILEIDWDFIGAVEHAVAALHPLSDHQPEALRNGVLGLLERLKLLFPVQPDDADSTDIIASTKLVSDVELIVKDMSLLGLIPIKYPALRDQSAFLPVSVVENQPDVQESPYIRIRSYNELLLTMDSQFPIDICIVSFKLSDATKVSHRVDKAIEKGWWVGNIDILHTTSHFRSIISRISESISNLQMTLLEVPPIPADIITNQMEYPNELVKGIPAKLDKLLFEANTIQGLKVQYPDPEGLKVNGLSDITPVANSPQLYLHLKHMCILGVTFAHAPYMLEQVLKVGKEREVNRWLVGNLAELKEIASFRTAFLCLVSSLESLSKKHQILEDDWNMIAAVKDAVARLPPLSDRQPEALRAEVLKLLERLESTLPVQPGGSDSSGANSLEVLSSTLTSDVGAILKDMYEVGLRHIEYTQVDLPAFMELEDEEENQPEYPDTDHLPPSP</aaseq>

Gene Sequence

<dnaseqindica>1..62#1398..1521#3352..4399#4537..5303#ATGACGCTGAATCTCCTTGAAATTGTTGGAGGTCGTCTGTGTCGTAGGCAGCAGCTTTGCAGGTTCTGAAGATGCCGCTCGTTGCCGAACGATGAACAGCAGCTTCAGCTTGATCAAGGCACGCCGGCGGCGCTGTCTTCAAGGAGATTCACGCCCTCGCCGAGGTGCACGAGACAGACGGCGGCTCTCCTCCAAGATACAATGATCTCGTATCCTCAGCCGTGCACTCGGCCAAGAACGAACCAGCGGACTTTCGTGGGATGACTCTCTCTATGCAAAACAAGCAGATGGATGTGGGCAAAAACTTCGTGTAACAAATACAGCAGCAGTACGAGACTTATATAGCCTTGTATAGCAACAAGAAAATCTTATCTCTAAGCCGGATAACAAACAATCAACAGATTGATTTTCGTCGGCCTGAATATCTGGAACAATAAAGAGTTATCTTCCACGTACAGCTCAAACCAACAAGATCAAAACTGAAAACCGAAATCTGAAGATAAGGCAAAAATTCAGATATATTTATCTGAACCAAACTGAAGGATCGCTGGTACAAAATGAATAGAACCAAAGAGATAAAATCTGAACAACCATCAAACATCGTTTGTGACTTTCATTCAGATATAATCAGAAGGAAAACCAATTGAATTCCAACAGAGTAGTGGTACTCGGTGCCAGTGAGGACAAAGGGGAACCGCAACGCCGCGGCCCCCGATCTTAGTCTATGGCTCTGTTTGCAAGACTTTGTACTACTCCCTGCTCTCTTTTTTCACGCACATACTTTTTAAACTGCTTAAACGGCGCGGTTTTTAAAAAAAGTTTTTATATGAAAGTTATTTAAAAAAACATATTGATCCATCTTTGAAAAAAATTAACAAATACTTAATTAATCACGTGTTAATCGACTGCTCAATTTTCCGGGAAATTGTTCCTGCGAACACCCCTATGCCTCTATGTGAGTAGTAATTGTTTAGTTGTGTTGGGTCGGGCTAGGCTGGCCTTAAAAGTGAACAAGTCAGGAGAAGCTACAAATCTACGATCTAGATATTTCATTTTTCTATTTTTTTTATACATGACATCATTAACCTTTTAGCATGCGTTTGGCTATTCATCTTTTTCAATTTTTATGCAAATATAGAAAAAAATTAAGTCATTCTTAACGAACATTCGACGATAAATCAAGTCACAATAAAATAAATGATAATTACATTTTTTTTTTAATAAGACGAATAGTCAAACATATCTCAAATAGTCAATGGCGTCATATATAGTAAAAAAATGAAGGGAGTGTATGGTGAAAAAAAAAAGTCAAGCCTTTGAAACATATAAAAAAATTGTGAAATATAGTGAAACACGAAATAAATTTGAAAATATACCGTTGAATTGTTTTTTCTCAGAAATATTCGGGATGTAAATTTGTTGGCAGAAATATACCGTTGTCTCACACAACCGTTGCGCAAGAATGACACGGGCGGTCTCGCGCAAAAATCAAGGAATGAGCGAGAGCGGACGGCTTGCCTGGTGAGCTGCCGCTATAGATGGCTATATGGCCCGCGGCTAGACCCAAGCACGGCACGGCCCGACTGGGGTTGTGCTCATGCCGGCTCGGCCCTGTAGGATCGGCCCGACAGCCTAGCCGTGCTTGGGCTGCTCCCTCGGTGCAATGGGTCGGCCTAGCCCGACACAATCGAAAAAATAGTTGAGGGACGCAAAATAGACTTAATTAACCATATAAAGCAACGCACATAGACCAGAGTAATACAAAATAGACTTATTTTCCAACCATATAGACACATCACACAGAGTTTAGGGAGGAAAAATAGACTTAGGGCCTGTTCACTTTGATGCCATTTTTAACCTTACCAAATTTTGGTAAAGTTGCAAAAAAAGTGGCTACATTTAGTTTGCTGCCAAATTTTGGTAACTATATAAGAAATACTACCAAAATTTTGGCAAGTTGCCAAAATTTTGGCAATTATGCCAAAATTTGGTAAGGTTTTTTTTGCATCAAAGTGAACAGACTCTTATACTATACAGAAGCACGATAGGTCGTCGTGCCTTCGGGCCGGTCCGACACGACCCGAGTCTTATTGGGCCATGCCTGGGCCGTAAGTGTAGCCTGTGGGCTGGCACGGTATGGGTCGACATATAGGTCGAGCCGTGCCGGCCTGACTGACCTCGGCCCAAGCCCGGCCATGCCTGGACCGAGCCGTGCCGAGCGGTCTACTTGGTCATCTATAGCTGCCGCTTAATTAGTGACAAATTACTCAATTAGTGATTAATTAATAATAGTTAGTGATAAATTATCCTAATCACTAATGAGGATCATTAAACATTTTGAACCGGCCCAGCCGTTCGTTCTTCCTAGCTGGTAGCACTCTATTTCGTCGTGCGAGGCCACGCGAGACCGCCCGCGTCTTTATTTTCACGTAATGTTTATGCGAGACCGATAATATATTTCTGCCAAAAGAAATATATCCTAAATATTTTAGAGAAAAAATAAATCAAATATATATTTTAAAATTTAATTAGTGAAAACATATTACTAGTATGAAACATTGAGTTAGTATTATCTGAAACATATGTTTTTCTTTCATCGGAATATAGTCATGTGATATCTTATTATAAAAATTAAATTATAATGAATTCGATGGTGTGATGGAATCGTTCATTGTAATTAGTTTTGTAATTAGTTTAGAAGAAAAAATATTTTAAAGATTACTAAATATATGCCGGCATGTATAGAGTAGAGAGAGAGCCAATAGAATAACAGGAGAGAGAGTAGGGGTGTTAGGCTATGATGTTTTTTTCTGGTCATCAGTGAAACATTGAGTTATACGTGGTGAAAAAAAATCAGTTGTAAATATATCTTTATTACCAAGTTGCAGTTGATGCAACGGACTACGGAGAGAAACACACGGGAAAGAAAGAAAAAAGGGAGGTAAAAAAAAGAAAGATCTGGGCCGGTTTGGGGGATTAGGCCTGTTTGTTGTGAAGTACTCCACTCCAGTAGTGGGCTATACGGGCTCTGGGAGCCGAGCCCACTTGAAGCCCAACCGCCCTCCTTTTTTCGCATCGCAGGAGAACGAACGAACGCGCCAAAAAAATTGGGAAGCCGCGAGGCGGAGACACGTGTCAGTGGATCATTGGCTGGAAGAGGATGGATGACGTGTAGGATATCTAGTCCGCTGAATCATTCTGGATCGCACGGTGGATGGTTACTGGAGACGAGACGGTTGCAGTTGCCTACCTCCCGATTGCTTCCTCTCCTCCAGATCAATTCCCCAAATCCTCCTCCTCCTCCGGCGAAGCGGAAAACCCTAGGTCGTCGACGACTCCAATGGCGCCTAGGATCCTCTACCGCGACGCGGGGTTGGACGACGACTCCGAGGACGACTTACCCGCGGGATTTTGGGTGGTGGCGGCGGCGGGGGCGGGGGCGGGGGCGGTGGTGGTGATGGTGGCGGTGGCGGTGGCGGTGGCGGGGCCGTGGAGGAGTTCGCGGCCGAAGAGGCAGCCATCCCCATCCATGTCGCCGGCAGCGTCCAGGGCCAATACATCGAGGTGACTTGTTTGGCCGACATCATGTCCGTGATAAATTTCCCCCGGCTCTACCGCGAGTTCGACCGTATTTGCGTGCTTGAGTTCCCATTCGTCGACGCCCCGCACTTGCTGGAGACTATTTTGGAGGTTGGCAAGCCAGGAGAAGAGAAAACCTGGCTGATTGGGAATTTGCCTGAGCTTATTGAGATTACTAGATTCAGAGTTGCTTTTCTCCGTGTTTCATCCTCACTTGAGCGGTTGCTGAGCCTGTGGAAGACCCATGGAATACTTGAGATCGATTGGGATTTCATAGGGGCAGTTGAGCATGCGGTAGCTGCGCTCCACCCTCTCAGCGATCATCAGCCCGAAGCTCTGCGCAATGGTGTGCTTGGGCTCCTAGAGCGCCTCAAGTTGTTGTTCCCTGTGCAGCCTGACGATGCTGACAGCACTGACATCATAGCGTCGACAAAACTAGTGTCTGATGTGGAGCTTATTGTCAAGGATATGTCCTTACTTGGGCTCATCCCTATCAAGTACCCTGCTCTAAGGGACCAGTCTGCATTTCTGCCGGTGTCGGTAGTGGAGAACCAGCCCGACGTCCAGGAATCCCCATACATTCGGATCCGCAGCTATAATGAGCTTCTGCTCACGATGGACTCCCAGTTCCCCATTGATATCTGCATTGTCAGCTTCAAGTTGTCCGACGCGACAAAAGTGTCCCATAGGGTGGACAAGGCAATTGAGAAGGGATGGTGGGTCGGCAACATAGATATCCTGCACACGACGAGCCACTTCAGATCCATAATTTCTCGGATTTCTGAGTCCATCTCAAATTTGCAGATGACATTGCTAGAAGGTGAGATTGATTGGTTTGAGATTAAAAGGATCAAACAGCTGAAGGACAGGATCACTGCGTTGTGTGACAATCAGCCCATGGAGCTTTGTAATATCACTTTTGAATTCTTCACCAACATCGACACTGTGCTATCCGAGTTCCCCCCATTCCTGCTGACATAATCACAAATCAAATGGAATACCCCAATGAACTTGTGAAGGGAATACCTGCTAAGCTGGACAAGTTACTTTTTGAGGCCAACACTATCCAAGGCTTGAAGGTTCAGTACCCAGATCCTGAAGGCCTGAAGGTGAACGGTCTGTCCGATATCACGCCGGTGGCCAACTCCCCCCAGCTGTACCTCCACCTGAAACACATGTGCATCCTTGGGGTCACCTTCGCCCATGCCCCGTACATGCTGGAGCAAGTCCTCAAGGTTGGCAAGGAGAGAGAAGTTAACAGATGGTTGGTTGGGAACTTGGCAGAGCTTAAGGAGATCGCGAGTTTCAGGACTGCATTCCTATGCTTAGTTTCTTCCCTGGAGAGCCTCTCGAAGAAGCACCAGATACTTGAAGACGACTGGAACATGATTGCCGCCGTCAAGGATGCGGTGGCTCGCCTTCCCCCGCTCAGCGATCGCCAGCCTGAGGCTCTTCGTGCTGAGGTGCTGAAGCTCCTAGAGCGCCTCGAGTCGACGCTCCCCGTGCAGCCTGGTGGCTCCGATAGCTCTGGTGCCAATTCCCTGGAGGTTCTATCCTCAACTCTAACGTCTGATGTGGGGGCAATCTTGAAGGACATGTACGAAGTTGGACTCAGGCATATCGAGTACACTCAAGTGGATCTTCCAGCTTTCATGGAACTGGAGGATGAGGAGGAGAACCAGCCAGAATATCCCGACACAGATCATTTGCCTCCATCCCCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031271