BGIOSGA031282

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Revision as of 09:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031282| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031282, complete gene.| tag = OsJ_303...")
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Gene Name

BGIOSGA031282

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031282, complete gene.

LocusTag

OsJ_30372

Ensembl Transcript ID

BGIOSGA031282-TA

Ensembl Protein ID

BGIOSGA031282-PA

Length

3884

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21360867..21364750

Sequence Coding Region

21360867..21360914,21360998..21361115,21361208..21361278,21361379..21361435,21361851..21361942
,21362183..21362230,21362976..21363096,21363175..21363221,21363376..21363457
,21363671..21363747,21363852..21363971,21364443..21364517,21364597..21364750

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21360867..21364750 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21360867..21364750 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCGCCGCAGTCGCCGCCTCGCTGGTGCCCTCGTGGAGCGCGGTGTTGGTGCTCTTCTCCTACCTAGGCTACCTCGCCGCCGCCGGCGCCGTCCTCCCCGGCAAGCTCGTCCCCGGAGCCGTCCTCCCGGACTCGTCCCGCCTCCACTACCGCTGCAACGGTTTGCTCTCGCTCCTCCTCTTGCTGGTGCTCTCCGCGCTCGGTGTCTACATGGGATGGATGTCCCCTACGGTCATTGCTGACCGTGGAATCGAGCTGTTGTCTACAACCTTCACTTTTAGTGTTATTGTTACCTTCTTACTGTATTATTCAGGATTAAGGTCCCATCATAAAAGTTCTTCCTTGAAACCGCATATCACTGGGAACTTCATACAAGATTGGTGGTTGGGAGTGCAGCTCAATCCTCATTTCATGGGAGTTGACCTCAAGTTCTTTTTTGTGAGAGCTGGGATGATGGCATGGTTATTTATCAACCTATCTTTGTTTGCAAAGAGCTACCTAGCTGGTTCAGCCAATCTTTCAGTCATTCTCTACCAATTCTTTTGTGCGTGGTATATTGTAGATTACTTCGTTCATGAAGAATTCATGACTTCAACATGGGACATTATTGCGGAAAGGCTGGGTTTCATGCTGGTCTTTGGTGATCTAGTGTTCATTCCATTTACCTTCACCATTCAGGGATGGTGGCTTTTGAGAAACAAAGTGGAGCTGCCCCTTTTGGCTGCTGTAGTTAACTGCTTCATTTTCGTTATTGGCTATCTTGTGTTCAGAGGAGCCAACAAACAAAAACATATCTTCAAGAAGAACCCTAAAGCTCTTATTTGGGGTAAACCTCCCAAACTTGTCGGGGGGAAGCTACTTGTATCTGGCTACTGGGGAATTGCAAGGCACTGCAATTATCTTGGGGATATACTGCTAGCTCTTTCATTTAGCTTACCCTGTGGAACCAGTTCGGTGATCCCATACTTCTACCCAACATACCTGTTCATTTTGCTGATATGGAGGGAACGAAGGGACGAAGCAAGGTGCTCAGAGAAGTACAAGGAGATCTGGGTAGAATATTGCAAGCTTGTGCCTTGGAGGATCTTTCCTTACGTGTATTAA</cdnaseq>

Protein Sequence

<aaseq>MDAAAVAASLVPSWSAVLVLFSYLGYLAAAGAVLPGKLVPGAVLPDSSRLHYRCNGLLSLLLLLVLSALGVYMGWMSPTVIADRGIELLSTTFTFSVIVTFLLYYSGLRSHHKSSSLKPHITGNFIQDWWLGVQLNPHFMGVDLKFFFVRAGMMAWLFINLSLFAKSYLAGSANLSVILYQFFCAWYIVDYFVHEEFMTSTWDIIAERLGFMLVFGDLVFIPFTFTIQGWWLLRNKVELPLLAAVVNCFIFVIGYLVFRGANKQKHIFKKNPKALIWGKPPKLVGGKLLVSGYWGIARHCNYLGDILLALSFSLPCGTSSVIPYFYPTYLFILLIWRERRDEARCSEKYKEIWVEYCKLVPWRIFPYVY</aaseq>

Gene Sequence

<dnaseqindica>1..48#132..249#342..412#513..569#985..1076#1317..1364#2110..2230#2309..2355#2510..2591#2805..2881#2986..3105#3577..3651#3731..3884#ATGGACGCCGCCGCAGTCGCCGCCTCGCTGGTGCCCTCGTGGAGCGCGGTGCGTCCTCCTTCCTCGTCCTGCATCCATACATCCATCGGAAGCTCCTGGATTGGAATTTTTTTTGGCTCCATTCTCTGCAGGTGTTGGTGCTCTTCTCCTACCTAGGCTACCTCGCCGCCGCCGGCGCCGTCCTCCCCGGCAAGCTCGTCCCCGGAGCCGTCCTCCCGGACTCGTCCCGCCTCCACTACCGCTGCAACGGTACCGCCGCCGCCGCACTAGCCCTGCTACTCTACGCTTTTTCGATGCTGTGCTTTTTAGCCACCTCATGCGTGCGTGCGTGACCCGCGCAGGTTTGCTCTCGCTCCTCCTCTTGCTGGTGCTCTCCGCGCTCGGTGTCTACATGGGATGGATGTCCCCTACGGTGAGCTTGCTTACTCCCTCCCTCCCTCTGCCTCATGTACCAAGCTTTCAGTTGCTCCCTTCCTTGAATTGATCAACATCTCGTTTGCTTATGATTGCAGGTCATTGCTGACCGTGGAATCGAGCTGTTGTCTACAACCTTCACTTTTAGTGTTATTGTAGGTGGCATCACTCATCTGACCTCCCTCCTTTCATATGTACTGTTTGTTAATGAAGTTACAGACTTAAAATTAGGTGCAAATCTGAATAATCTAAGTTTAAGTACCAACTGAACATAACTAATTCAGAAGAAATAAACGGCCATCGACATGTTTGATGTTTTAGCCCCAGTTACTACCTCTATCATTTGGTACAGCTAAAATTTAGCAAAGGAATTAGTCACACTGGATATGTCTAGAATTTGTAAGAAATAACAAAAAAAGATGATACACATAGTGAAATCTTCCTACTAGTTTTGCTGTCAACCAAATTTTGTCAGCACCATTAAACTGTTGGCGTTTAGTGTTCACTAACATATGGTCAAAAGACATTTAAGTTCTTTTCATCGACTCATTTCGTGCTTTTGTATTTCAGGTTACCTTCTTACTGTATTATTCAGGATTAAGGTCCCATCATAAAAGTTCTTCCTTGAAACCGCATATCACTGGGAACTTCATACAAGATTGGTACTTCTAAGAAACTCTATATTTGTATAAAAACCATAATGAGTGAAAATTAACGTCTAGCATCCCTTTTGCACTCGAGATATTTCATCAGTTCTTGCCATTTCAACTTCTAAAATTTACCAATTAGAAGCTTATGTATCTCATTTCAATTAGTCATCTTCAAAAGTTCAGGAAACTATCCTCTGTATTAATATATAAGTTAATACTGATAATTTTTACGTTGATCACTTTGTCTACTAGGTGGTTGGGAGTGCAGCTCAATCCTCATTTCATGGGAGTTGACCTCAAGTATGTCAGCAACGTCTTTGTTTTCTTGCTCCATTTTGGATATGTCGTTCAAATATTTAAATAGCAGCATGATTATTGTGAGAATTGTGCTATTGGCTTGTTGCTTCTGGTGCAAGTATTTATTCCATTTCCTATTGATTTTTATGCCCCAACAGATTGATTAGTTTTGTAATGTTCTCATCGAATTATTTGATGCATACAGTCTATGCACAATGCCAATGTGGTTCAAATGGAACACTTGTTTATTGTGCAGTTGACTAGTTCTAAAAGAGGAAGTAGTGTTGTTGAGCGCATAAGCTCTTCAGGAATGTTAGGGTCTGCTGAAACTTGAGTTTACCCTGTCACAGCTATTTGTTTCGTCCCACCTGATTTAGAATAGTAAGACATGTAGGCTTTTTATTTCTGGGTGGACAAAAGCAAATTATAATTGTACATGAATTTAGATGCGCTGCATAACATTTTCTTTTCTTTTTTAATTCATCATCTACTAAAGTCACGTAACTAATCTGTGGTGAGTTTTGTTAGGGCGAATTTGTGGTGAGTTACTATGAATCCTTGTCAGTGTGATGTATAAAGTAGATATCCATAACCAGCTATTTTCCCTTTTCTCAAGTTGTTCCTATTATTTGTCTTTCAAATGATAAAATAATTGGAGGACTCACTCTTTTCGGGAAAAGAGTTAATTTCTCCAGTGGGATCGTGTTATGATGATTTTTTTTCAAAAAAATATTCACCATGTTTGCAGGTTCTTTTTTGTGAGAGCTGGGATGATGGCATGGTTATTTATCAACCTATCTTTGTTTGCAAAGAGCTACCTAGCTGGTTCAGCCAATCTTTCAGTCATTCTCTACCAATTCTTTTGTGCGGTATTGGACATGGACATTTCTTCTTTTGATCATCATATACTCCATAGTTCATGATACTAGTTATGTTTCTTCATGCAGTGGTATATTGTAGATTACTTCGTTCATGAAGAATTCATGACTTCAACGTAAGTATATCATTTTGTCCTATAATAAAAAGATATGTTAATATCAATCCAGTGTGCCTGAATGATCATCTGAAATGCATGTGACGATCAGCAAGGACGGAGTTCATACCTCATTGTTTTTCTGTACAGCTTATTTTTTTTTTATTATTTCCAGATGGGACATTATTGCGGAAAGGCTGGGTTTCATGCTGGTCTTTGGTGATCTAGTGTTCATTCCATTTACCTTCACCATTCAGGTGTGTATCCATATATTTTTAGTTCTGCAATTGCTAAGTTTGACCCATGTCACTGTTTCAGTCAGAATTACCATTCATGCATCATATGGTTATATATTCAATTAATTCCAAGCTTTATCACGTTTTCAAGTCAACTAAAAGTATGGATGCCTCTTTTGTTAGTAGTCAGGTGGTTGACATTCAAGATATTATTTTTTTAACGGTGATGACCAGGGATGGTGGCTTTTGAGAAACAAAGTGGAGCTGCCCCTTTTGGCTGCTGTAGTTAACTGCTTCATTTTCGTTATTGGGTACTCTTCCTATGTTACCAGAACCTGCTTTCGATTATATAATATATGGCCTGTTTATTGCATTCTAATCTCTTTAACAATGGTTTATTCCATTGGGCCCACAGCTATCTTGTGTTCAGAGGAGCCAACAAACAAAAACATATCTTCAAGAAGAACCCTAAAGCTCTTATTTGGGGTAAACCTCCCAAACTTGTCGGGGGGAAGCTACTTGTATCTGGCTACTGGTAAGATGGATATGCATCTTATGGAGCGCGTGCATGTTTTCTCCTTTATAAACTGCTTGGTCCATAATACTGAGTTCTGAAGTGTGTGTTGTTGAATGTTCCAATAGCCTAACATACTAACCTTCTGCTCTAGTCTGCATACCCATTGCCTAAAGATTTAGCTGGTGCTGGTGAGTTGGGACAGAAAAGGAAAAATACTAGTAAAGAAAGTGTGGGTGAGTAGGTAGGCAGCTAACACACAAGTTAGAATTCAGTGTATCTAAATGATGTTTATCACAGCTGCACCAAGTTTGGGTAGTGTACGGCGTACCTATATCGATATTAATCAACAATTTTGTAGTTCTATAAAAGCTTGAATAATTATGTTCGGCTATTTGAACTTTTCACGTCCCTTTCTCGCTTTAGATTAATCATGCTTCTTAAGTACTCTTTACAATGTGAAATAATGAATCCCCTTTTCATCCAATACAGGGGAATTGCAAGGCACTGCAATTATCTTGGGGATATACTGCTAGCTCTTTCATTTAGCTTACCCTGTGGAACCAGGTGATGATGATCGTTCGACACAACTCTCTTATTCAATTTGATTCTCATAAACCCTAAATCATAAACCCTTTTGGTGCAGTTCGGTGATCCCATACTTCTACCCAACATACCTGTTCATTTTGCTGATATGGAGGGAACGAAGGGACGAAGCAAGGTGCTCAGAGAAGTACAAGGAGATCTGGGTAGAATATTGCAAGCTTGTGCCTTGGAGGATCTTTCCTTACGTGTATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031282