BGIOSGA031303

From RiceWiki
Revision as of 09:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031303| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031303, complete gene.| tag = OS09G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031303

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031303, complete gene.

LocusTag

OS09G0570000

Ensembl Transcript ID

BGIOSGA031303-TA

Ensembl Protein ID

BGIOSGA031303-PA

Length

4412

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21562109..21566520

Sequence Coding Region

21562109..21562301,21562642..21562763,21562911..21563032,21563552..21563741,21564021..21564161
,21564404..21564871,21564989..21565756,21566332..21566520

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21562109..21566520 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21562109..21566520 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACGGCGGGCTCCCCCTCTCCGTACCCCGGTGATTCGCCGGAGCCGTCCTTCTCCGGCGAGAAGGTGTACGTGGCGGTGGGGGAGGAGTCCAGCAGGGGCACGCTGCTGTGGGCGCTGCACAAGTTCCCCCAAGGCACCGCCTTCGTGCTGCTCCATGTCTACTCCCCTCCCAACTTCCTCCCCATCCTCGGAGCCAAGATTCCCGCCGGCCAGCTGCGAGAGCAGGAGCTGATTGCACACAAGAAGATGAACCTGCAAAGAATCAGTGACAACTTGGATCAATACCAACTCATATGCGTGCAGCAGAAGGTACAAGCTGAGAAATTGGTGGTTGAATCAGATGATGTTGCATACGGATTGGTGGACGTCATCTCTGAGCATAATGTTTCCATGCTTGTAATGGGGGCCGCAGATGATAAGCACTATACAAAGAAGGCTGCTCCCTTTGGACATGACGTGATGCAGGACTGTAGGCAAAGTGCTACTTCTGCACAATGTTCAGTGGAGAGATCGAGTAGCTTGTCAGAGATTTGGTGTGTTTCAAACACATGGCTACACAAACTAAACCTCGAACCACATATCGAGACAACTAGTTCAGACAGATACTCTGATAAGGAAAAGGAAGATACTAAAGAGCGTGGTGAGTCTGACAATGAGCTCCAGCATATACCCATGCAGTTAGAGAGAGTAAGACAAGAAGCTTATGAGGAGAAATGTAGGCGCGAGAAAGCAGAGCAGGAGTTATTTGAGGCTCTCCAGAAAGTGCAGGTATCAGAGAATTTGTACTTTGGAGAACTGAAGCAAAAGAATGAAATAGAGGTAAAATTGGCAACAACAATGGAGGAAGTTGACAGGCTTGCAAGAACAGCTGATGAACTTGCTGCAAAATTTCAAGAGCAATGTGAGAAGATATTGGTCCTAGAGAAGCGAAGCGCCCATTCTGACCGTATTATCAAGGATCTTATGTTGCAGCGTGACAAAGCAGTAAGAGAGGCAGAAGCAATACGTGTAAAAAATGGAGAGTCTACTGCAATTGCGGATAGAACAATTCCCATTACAGAGCTATCAATATCAGAGATTAAGGAGGCAACCAGCAACTTTGATCACTCATCGAAGGTTGGGGAAAGTGTTTATGGAAGTGTATATAAGGGACTTCTTCGGCAAACAAATGTGGCTGTAAAGAAGTTGAATCCTGAAAGCACAGAGTCACTGTCACAGTTCAGTCATGAGGTGGAAATCCTTAGCAGGGTGCGACATCCGAATCTTGTAACTCTTATAGGGGCATGCAAGGATGCCCGAGCTCTTGTCTATGAATACATGCCCAATGGAAGCTTAGATGACCGCTTGGCTTGCAAGGACAATTCAAAGCCTCTTAGTTGGCAGTTGCGTACCCGCATCGCTTCCAATATTTGTTCTGCACTGATTTTTCTCCATTCCAATAAACCCCACAGCATTGTTCACAGTGACTTGAAAGCATCTAACATTCTTCTTGATGGAAATAATGTGGCTAAGCTTAGTGGTTTTGGTGTGTGCCGAATGTTAACTGATGAATTCAAGGCCACAACCACTCTATACCGCCATACCCACCCAAAAGGAACTTTTGTGTACATTGATCCTGAATACGCTATTTCTGGTGATCTGACACCCCTATCTGATGTATATTCTTTTGGTATCATACTCCTGCGACTCTTGACTGGAAGATCAGGATTTGGTCTTTTGAAAGATGTGCAACGGGCAGTAGCAAAGGGTTGCTTGCAAGCAATATTGGATTCATCAGCTGGAGACTGGCCTCTTATGCATGCTGAGCAGTTGTCTCGGGTAGGCCTAAGATGCTGTGAAATCAGAAGAAAAAACCGTCCTGACCTGCAAACAGAGGTTTGGACAGTACTTGAACCAATGTTGAGGTCTGCTTCCTCTATGCTATGTTCATTATCATTTAAATCAGTATCTGAAGACTTTGGTAATGTGCCATCCTACTTCATCTGTCCAATACAACAGGATGTCATGAGGGACCCTTTAATTGCTGCAGATGGTTTCACCTACGAAGCAGAGGCTATAAGAGAGTGGTTTGATAGTGGTCACTATACATCACCCATGACAAACCTCGATCTACCACACCGTGATCTTTTGCCGAACCATGCCCTCCGTTCTGCAATTCAAGAATGGCTTCAGTCAAATGCAGATTAA</cdnaseq>

Protein Sequence

<aaseq>MATAGSPSPYPGDSPEPSFSGEKVYVAVGEESSRGTLLWALHKFPQGTAFVLLHVYSPPNFLPILGAKIPAGQLREQELIAHKKMNLQRISDNLDQYQLICVQQKVQAEKLVVESDDVAYGLVDVISEHNVSMLVMGAADDKHYTKKAAPFGHDVMQDCRQSATSAQCSVERSSSLSEIWCVSNTWLHKLNLEPHIETTSSDRYSDKEKEDTKERGESDNELQHIPMQLERVRQEAYEEKCRREKAEQELFEALQKVQVSENLYFGELKQKNEIEVKLATTMEEVDRLARTADELAAKFQEQCEKILVLEKRSAHSDRIIKDLMLQRDKAVREAEAIRVKNGESTAIADRTIPITELSISEIKEATSNFDHSSKVGESVYGSVYKGLLRQTNVAVKKLNPESTESLSQFSHEVEILSRVRHPNLVTLIGACKDARALVYEYMPNGSLDDRLACKDNSKPLSWQLRTRIASNICSALIFLHSNKPHSIVHSDLKASNILLDGNNVAKLSGFGVCRMLTDEFKATTTLYRHTHPKGTFVYIDPEYAISGDLTPLSDVYSFGIILLRLLTGRSGFGLLKDVQRAVAKGCLQAILDSSAGDWPLMHAEQLSRVGLRCCEIRRKNRPDLQTEVWTVLEPMLRSASSMLCSLSFKSVSEDFGNVPSYFICPIQQDVMRDPLIAADGFTYEAEAIREWFDSGHYTSPMTNLDLPHRDLLPNHALRSAIQEWLQSNAD</aaseq>

Gene Sequence

<dnaseqindica>1..193#534..655#803..924#1444..1633#1913..2053#2296..2763#2881..3648#4224..4412#ATGGCCACGGCGGGCTCCCCCTCTCCGTACCCCGGTGATTCGCCGGAGCCGTCCTTCTCCGGCGAGAAGGTGTACGTGGCGGTGGGGGAGGAGTCCAGCAGGGGCACGCTGCTGTGGGCGCTGCACAAGTTCCCCCAAGGCACCGCCTTCGTGCTGCTCCATGTCTACTCCCCTCCCAACTTCCTCCCCATCCGTACGCATCCCTCTTCCTCCTACCTACACTAGTACTAGAGTCTAGATTGATGATCCGATCTACCACGATTGTATTGGCACAGATCGTCTAGTTTCTTTGTTCAGTTCCCTCAATGACTCCAAATTTACAACCTTTTTCCCCACTCACTAAATCATTTCTCTCTCTTTTTTTAATGCACCATTTTACCCCCTACGTTTTTACAATCGAGGCCAACTCAATTCATTCAGATTGAGTTTGGCTTCCATTTTGTTTACATCTCTGGCTTCCTCTTAGAGTTTTCAGTCCATGTATGTGTATGGCTGCAAATGCTTATGCAACCTCCATCCATTGTCGTGTGCAGTCGGAGCCAAGATTCCCGCCGGCCAGCTGCGAGAGCAGGAGCTGATTGCACACAAGAAGATGAACCTGCAAAGAATCAGTGACAACTTGGATCAATACCAACTCATATGCGTGCAGCAGAAGGTCTGCCTGTTTCCCACTTTATTGAACTAAAATTCAGTTGTATTCACATGTAAAGGCCAACACGGATGTATCAATTCATTGGTTTTGTTTGTTGCAAAATGTCATCCGTAATCTCGATTGATACTTCACTGTGCTATTCATCTCTAGGTACAAGCTGAGAAATTGGTGGTTGAATCAGATGATGTTGCATACGGATTGGTGGACGTCATCTCTGAGCATAATGTTTCCATGCTTGTAATGGGGGCCGCAGATGATAAGCACTATACAAAGTACGCATGTGCCAAAGCTTGGAATACTTTTATGCATTTTTATCCGTAGTAGTAGTAACTATGATTAAACACTGTGATCACAGTGGATGCTAGTAAGGAACCATGCTTGGGAGAAGTGTTGGTTTTTGTCTACTTAGCTAAATAAATTCTTCAAGATAATCAAATGTTAACACTAATTGCTTGCACCTTGGTTTTCTGGGAAGCAAACTTAGTGTTTGTACTGCTTCAGTACGTTCTAAAATCTAAATAGTAATCTTTGCCCTATTAATTCTCTAAAACCTAACTCCTTGTTTCAAGAGTTCAGGAAAATGAAGGTTCTGAAATCCAGGAAAGCACGAGTTGTAGAACAGCATGCAGATCATTTCTGCAAAATATGGTTCATTTGCAAAGGCACACTGGTATACTGTAGGTATGGTTGTAAGCTGATCATACACTTCACTTTGTTCCTACATTACGGACTTTCCAGCCTGCATCCATTTGCATTTACTATGTTCTCTTCCTTTGTATTCTCTACACTAGGAAGGCTGCTCCCTTTGGACATGACGTGATGCAGGACTGTAGGCAAAGTGCTACTTCTGCACAATGTTCAGTGGAGAGATCGAGTAGCTTGTCAGAGATTTGGTGTGTTTCAAACACATGGCTACACAAACTAAACCTCGAACCACATATCGAGACAACTAGTTCAGACAGATACTCTGATAAGGAAAAGGTAAGCACAATTACGTCGATGTTGGATCTGATTAAGATCACTAATTGATCTGTCCACATTGCATCCTCACTTGAAATGGATCCATGATGGAGCATTTGCTTGATACATACATAAGTTAGAGGATCATTACATGGTATGCCATTTTGTCTAATAGCTCACCAGTTTGTACTTTTGATCATCTTATCTAGTTTTCCTTTGAATTTTGGGAGCTCTCTAATATCTTAATGGCAGTGCTCTCACAAATTTTGATGCATGAATAAGCTACCCAATCTTATGCAGGAAGATACTAAAGAGCGTGGTGAGTCTGACAATGAGCTCCAGCATATACCCATGCAGTTAGAGAGAGTAAGACAAGAAGCTTATGAGGAGAAATGTAGGCGCGAGAAAGCAGAGCAGGAGTTATTTGAGGCTCTCCAGAAAGTAAGAATAGATTAATTATATTTATCTCTCATATAATGTGTGCTATACTTAATGGTTATTCTAATGATAATATGGCTGCATGCCAATGAGAGCAGAGAAATTCTTCGTACTGTCCATTTAAAAAACTTTCATGATTGTTATACTCTATATCGTGGAGTATAAATCTGGAAATGATGTTTTGGATAAGTGATACCTACAGATTTAAACAAAATCCTTGGTATCACATTTAATATCACCAACAGGTGCAGGTATCAGAGAATTTGTACTTTGGAGAACTGAAGCAAAAGAATGAAATAGAGGTAAAATTGGCAACAACAATGGAGGAAGTTGACAGGCTTGCAAGAACAGCTGATGAACTTGCTGCAAAATTTCAAGAGCAATGTGAGAAGATATTGGTCCTAGAGAAGCGAAGCGCCCATTCTGACCGTATTATCAAGGATCTTATGTTGCAGCGTGACAAAGCAGTAAGAGAGGCAGAAGCAATACGTGTAAAAAATGGAGAGTCTACTGCAATTGCGGATAGAACAATTCCCATTACAGAGCTATCAATATCAGAGATTAAGGAGGCAACCAGCAACTTTGATCACTCATCGAAGGTTGGGGAAAGTGTTTATGGAAGTGTATATAAGGGACTTCTTCGGCAAACAAATGTGGCTGTAAAGAAGTTGAATCCTGAAAGCACAGAGTCACTGTCACAGTTCAGTCATGAGGTAAAAGTTTTTGTTCTAGTTATATACTTACCTTCTATAAACTTGATTGACATTTTGTTGGTCCAAATAAACTGTTGTATTTCAGACAGTTAAGTTGTTCTTGCTGATAATTTACAGGTGGAAATCCTTAGCAGGGTGCGACATCCGAATCTTGTAACTCTTATAGGGGCATGCAAGGATGCCCGAGCTCTTGTCTATGAATACATGCCCAATGGAAGCTTAGATGACCGCTTGGCTTGCAAGGACAATTCAAAGCCTCTTAGTTGGCAGTTGCGTACCCGCATCGCTTCCAATATTTGTTCTGCACTGATTTTTCTCCATTCCAATAAACCCCACAGCATTGTTCACAGTGACTTGAAAGCATCTAACATTCTTCTTGATGGAAATAATGTGGCTAAGCTTAGTGGTTTTGGTGTGTGCCGAATGTTAACTGATGAATTCAAGGCCACAACCACTCTATACCGCCATACCCACCCAAAAGGAACTTTTGTGTACATTGATCCTGAATACGCTATTTCTGGTGATCTGACACCCCTATCTGATGTATATTCTTTTGGTATCATACTCCTGCGACTCTTGACTGGAAGATCAGGATTTGGTCTTTTGAAAGATGTGCAACGGGCAGTAGCAAAGGGTTGCTTGCAAGCAATATTGGATTCATCAGCTGGAGACTGGCCTCTTATGCATGCTGAGCAGTTGTCTCGGGTAGGCCTAAGATGCTGTGAAATCAGAAGAAAAAACCGTCCTGACCTGCAAACAGAGGTTTGGACAGTACTTGAACCAATGTTGAGGTCTGCTTCCTCTATGCTATGTTCATTATCATTTAAATCAGTATCTGAAGACTTTGGTAATGTGCCATCCTACTTCATCTGTCCAATACAACAGGTTAGTAATATATACTTTACTTAGTGATTATTACTCCCCCTTCTCTCAAAAGTATTTCCTCACCATGATTTCCTTCAGACTCTCATGTTTGGTAATTGGTCCGTCTATGTAATGATATCCATTTCTATTTTTTTTAATATACTAGTCTCTAAAGGATAACTAGATGAGATATTTTTTGTATACAATAAGAGAAATCAAAGGGTGACATTTGATTGGATTTAAATTCCTCTTGCGCTTCTGCTTCCATTTATGATTCCTGATGTTATTTGATTAACTCCAAATTACTCCTGAGCTTCTGTTTCCATTTAGTATGATTCTTAGTAATTTTAGAGAAAGTCAGTCAATTGTTTGCCTGGACAGCAGTTGAGATATCAGTTCTGCAAACATCTCTGTGAACTTCAAGTTATGGGAGCTCTCAGTTCTTGTTACTAATGAAATGACCATTGTAAACTACTGTTTGTATGTGTGTTTCTCAACCCTGATGCAATGACACACCAAATTTTTTGTGTGTTACCTAAGGAAAGATAATCAGTTTTCTTCTCCCTTGGCTCACCTGTGCATTTTATGCATTGCAGGATGTCATGAGGGACCCTTTAATTGCTGCAGATGGTTTCACCTACGAAGCAGAGGCTATAAGAGAGTGGTTTGATAGTGGTCACTATACATCACCCATGACAAACCTCGATCTACCACACCGTGATCTTTTGCCGAACCATGCCCTCCGTTCTGCAATTCAAGAATGGCTTCAGTCAAATGCAGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031303