BGIOSGA031520

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Revision as of 04:40, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031520| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031520, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA031520

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031520, complete gene.

LocusTag

OSJNBB0005J14.26

Ensembl Transcript ID

BGIOSGA031520-TA

Ensembl Protein ID

BGIOSGA031520-PA

Length

3552

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19427104..19430655

Sequence Coding Region

19430281..19430655,19428500..19428715,19428119..19428406,19427692..19428027,19427382..19427585
,19427104..19427283

Genome Context

<gbrowseImage1> name=IndicaChromosome10:19427104..19430655 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:19427104..19430655 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGCAGCAAGCATATCGCGCACACGACGAGCTTCCATATATGGGAATGGACGGCGACTCTTCATACTCACCGGCATTGGCCGCCGTCGCCGGCGCCGTCGCGCTGGTGGCGTTCTGCTCCTACTACCTGGCCGTCACCCGCGCCACCGGCGACGGCGAGGCGAGGCGGCGGCGGCGGCGGCACCCGCCGGTGGTCGGCACGGTGTTCCACCAGCTGTACCACGTCCGGCGGCTGCACGACTATTACACGGCGCTGTGCCGGGAGCACACGACATTCCGGCTGCTCGCGACGCCCGGCCGCCGGAACATATACACGTGCGATCCGGCCGTCGTCGAGCACATCCTCCGGACCAACTTCCCCAGCTACGGAAAGGGCCCGTTGAACTCCGAGATCCTGAATGACCTGTTCGGGGAAGGCATCTTCGCCGTCGACGGCGAGAAGTGGAAGACGCAGAGGAAGATCGCCAGCTACGACTTCACCACGAGGGCCCTCCGCGACTTCAGCAGCGACGTCTTCAAGAGGAACGCCGCGAAGCTCGCCGGCGTCGTCTCCAACCACGCGGCGTCAAACCAATCCATGGACTTCAAGGGGTTGTTGACGAGAGCAACGATGGACTCCATCTTCACCATCGCCTTCGGGCAAGACCTCAACACGCTGGATGGCTCCGGCGAGGGGCGCCGCTTCGCCAAGGCGTTCGACGACGCCGGCGAGTACCTCCTGCTCCGCTACCTCAATCCGTTCTGGAAGCTGGCCAGGCTGCTCAACGTCGGCGCCGAGGCGACGCTCAAGGAGAGGATCAAGGTCGTCGACGAGTTCGTGTACAAGCTCATCCGTGCCAGGTCCGACGAGCTCTCCAACACCATGGCACAAGATCATCGTTCCAGGGATGATCTCTTGTCAAGATTCATCCAGGCAACGACCAGCGATTCTGGGACGGTTGATTACAAGTACCTGAGAGACATTGTTCTGAACATTGTCATAGCCGCCAAGGACTCGACATCGGGGTCGCTTGCTTGGTTCCTGTACATGGCGTGCAAGCGCCCGGAAGTCCAGGAGAAGATTTTCGACGAAGTCATGGAGGCCACCAACGCCGGGGACTCCGCTTCCATCGACGAGTTCTTGACGAGCCTTACCGACCAAGCACTGAACAAGATGCACTACCTGCACGCTGCACTGACGGAGACGCTCAGGCTGTACCCTTCAGTTCCACTGGAGAACAAGCAGTGCTTTTCGGACGACGTGTTGCCCAACGGTTTTAGCGTCAGCAAGGGGGACGGGGTATTCTACATGCCCTACGCGATGGGGAGGATGGAGTTCTTGTGGGGTAAAGACGCTGAAGCTTTCCGACCTGAACGTTGGCTCGACGAGCACGGCGTGTTTCAGCAGGAAAGCCCATTCAAGTTTACAGCTTTCCAGGCCGGCCCAAGAATCTGCATCGGGAAGGATTTCGCGTACAGGCAGATGAAGATCTTCGCGGCCGTGCTGATCCGTTTCTTCGTGTTCAAACTTCGCGACAAGAAGGACAACGTCAGTTACAGGACAGCGATTACGCTTGCCATCGATCAGGATCTCCATCTGACTGCTACGGCAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MQQQAYRAHDELPYMGMDGDSSYSPALAAVAGAVALVAFCSYYLAVTRATGDGEARRRRRRHPPVVGTVFHQLYHVRRLHDYYTALCREHTTFRLLATPGRRNIYTCDPAVVEHILRTNFPSYGKGPLNSEILNDLFGEGIFAVDGEKWKTQRKIASYDFTTRALRDFSSDVFKRNAAKLAGVVSNHAASNQSMDFKGLLTRATMDSIFTIAFGQDLNTLDGSGEGRRFAKAFDDAGEYLLLRYLNPFWKLARLLNVGAEATLKERIKVVDEFVYKLIRARSDELSNTMAQDHRSRDDLLSRFIQATTSDSGTVDYKYLRDIVLNIVIAAKDSTSGSLAWFLYMACKRPEVQEKIFDEVMEATNAGDSASIDEFLTSLTDQALNKMHYLHAALTETLRLYPSVPLENKQCFSDDVLPNGFSVSKGDGVFYMPYAMGRMEFLWGKDAEAFRPERWLDEHGVFQQESPFKFTAFQAGPRICIGKDFAYRQMKIFAAVLIRFFVFKLRDKKDNVSYRTAITLAIDQDLHLTATAR</aaseq>

Gene Sequence

<dnaseqindica>1..375#1941..2156#2250..2537#2629..2964#3071..3274#3373..3552#ATGCAGCAGCAAGCATATCGCGCACACGACGAGCTTCCATATATGGGAATGGACGGCGACTCTTCATACTCACCGGCATTGGCCGCCGTCGCCGGCGCCGTCGCGCTGGTGGCGTTCTGCTCCTACTACCTGGCCGTCACCCGCGCCACCGGCGACGGCGAGGCGAGGCGGCGGCGGCGGCGGCACCCGCCGGTGGTCGGCACGGTGTTCCACCAGCTGTACCACGTCCGGCGGCTGCACGACTATTACACGGCGCTGTGCCGGGAGCACACGACATTCCGGCTGCTCGCGACGCCCGGCCGCCGGAACATATACACGTGCGATCCGGCCGTCGTCGAGCACATCCTCCGGACCAACTTCCCCAGCTACGGAAAGGTAAGCTGAGTAACCGGGCCTCGCATGAATCGCGCACCCATTCCGGCCCAACTACTTATGGGCCGCACGTGAGTTAAAAGCCTGTTAGGGCCCAATTGTATTGCGCTCATCTTACGAATTTTTTTATTTATACATTTTTTTATTAAAATATTTACAAAAATATTTTTTTTGTTTCAAAAATTTACAAATCTAATCGCCTGCCGCCCTTTGGGAGATCGCCCTTCCAGAGGGCAGTAAGGGACCTAAATGCAAATTTTCCAGCACAACTTGTTAGCTCTATGATTTTACAATTTAAAATTATATTATATAAAGTTAGATGAAATAAAACTTTATATCAAAATGCTCCAGGTGATCTACAACTTTGTAGTTAACAACTTTTTCATTTAAGATGTTTTAGATATCCAAATATTCGTTACAAAATATAAAACACATTTAAAAAAATCTCATATCTACATTTCAAACGACATTGGATGGAGATAAACTTTATATAAAAGTTGTAGATCTTGATGAGATCTATAACTTTGTAGTTTATCACTTTTTCATTTAAAATCATTTGGAGTATCGAATAAGCATTATTAGTTTTTAAGCAATTAAAACTGGTGGAAAGGGTTTGAACACAAATAAAAATTTTACATTTAGGTCCCTTGCCGCTCTCTAGGAGGGAGATTTTTGAAAATATCCCTTCGTAAGGGCGGCAGGCGATTAGATTTGTAAATTTTCGAAACAAAAAATTATTTTTATAAATATTTTAATAAAAAAATGTATAAATAAAAAAATTCCTTATCTTACTAACGGCATTGGAAATTTAAAAGGAGATAAATCAAAAAGCGTTCTAATACAAGGTGCTTTCGTTGATAACCCTAGTGACGAAAATCTGAGAGAAGGCTAAAACCTAAACCCTAGCAGGAGCTAAACGACTCTCAAAGATTACCCCTTAGATTTTTTTTCTTCTATACTCCCTCCGTCCTAAAATATAAATATTTTTAGACTTTGACACAGTTTTCGAGTTACTACTTTGATCAACCATATCTATAAAAGTAAGATGTTTTAAATAAAAAGAGTTGCACTCCGTTCGTTTCAGGTTATAATACGTTTTGACTTTGGTCAAAGTCAAACTGCTTTAAGTTTGACCAAATTTGTAGAAAAAATAGTATCATTTTCAACCCAAGACAAATTTACTATGAAAATATATTCAATTATTGATTTGATGAAACTAATTTAGTATTATAAATATTACTATATTTGTCAATAAACTTAAATAAAACTTGAAACAGTTTGATTTTAACCAAAGTCAAAATGTCTTATAACCATAAATGGAGGGAGTGTATTATGATAGCTTGTTTAATGATAAATCTAGTAACATCAAATGTACATGATTGATCTTTTTTTCTATTAATAATTAAAATTTTAAAAGTTTGATTTGATATATTCTAAAAATATTTATATTTTGGGACGGATGGATAGAGTAGTTGTTTCTTACTTGTAAAATACTAGCTTTTAACTTAGCACACTCGTTTTTTAAAAAACAAATGTATTGTGCTGACATGTGCCATGTATGGTTTAAGGGCCCGTTGAACTCCGAGATCCTGAATGACCTGTTCGGGGAAGGCATCTTCGCCGTCGACGGCGAGAAGTGGAAGACGCAGAGGAAGATCGCCAGCTACGACTTCACCACGAGGGCCCTCCGCGACTTCAGCAGCGACGTCTTCAAGAGGAACGCCGCGAAGCTCGCCGGCGTCGTCTCCAACCACGCGGCGTCAAACCAATCCATGGACTTCAAGGTAAGTGCATGCATGCCATATCAATACCAAGCTCACGTACTGACGTATACTACATCGATCGTTTTCTTGATGTCCAAATGTTCGTTTCTTCAGGGGTTGTTGACGAGAGCAACGATGGACTCCATCTTCACCATCGCCTTCGGGCAAGACCTCAACACGCTGGATGGCTCCGGCGAGGGGCGCCGCTTCGCCAAGGCGTTCGACGACGCCGGCGAGTACCTCCTGCTCCGCTACCTCAATCCGTTCTGGAAGCTGGCCAGGCTGCTCAACGTCGGCGCCGAGGCGACGCTCAAGGAGAGGATCAAGGTCGTCGACGAGTTCGTGTACAAGCTCATCCGTGCCAGGTCCGACGAGCTCTCCAACACCATGGCACAAGATCATGTAAGCAATACCTCACATCAGTGGCATGTTGGTACATCAATTTGTGAGTGACCAGACGCTTAAACTGAGCTGAATTTCGTAACTGAAACAGCGTTCCAGGGATGATCTCTTGTCAAGATTCATCCAGGCAACGACCAGCGATTCTGGGACGGTTGATTACAAGTACCTGAGAGACATTGTTCTGAACATTGTCATAGCCGCCAAGGACTCGACATCGGGGTCGCTTGCTTGGTTCCTGTACATGGCGTGCAAGCGCCCGGAAGTCCAGGAGAAGATTTTCGACGAAGTCATGGAGGCCACCAACGCCGGGGACTCCGCTTCCATCGACGAGTTCTTGACGAGCCTTACCGACCAAGCACTGAACAAGATGCACTACCTGCACGCTGCACTGACGGAGACGCTCAGGCTGTACCCTTCAGTTCCACTGGTGATCACTGATCAGTCAATCAATTGACCAATGAACAGTATGATCAGGAAGTTATAATGAGAGTATATATCAAACTTACCGTTGCTTGTTTGTCTTGATGATTTAGGAGAACAAGCAGTGCTTTTCGGACGACGTGTTGCCCAACGGTTTTAGCGTCAGCAAGGGGGACGGGGTATTCTACATGCCCTACGCGATGGGGAGGATGGAGTTCTTGTGGGGTAAAGACGCTGAAGCTTTCCGACCTGAACGTTGGCTCGACGAGCACGGCGTGTTTCAGCAGGAAAGCCCATTCAAGTTTACAGCTTTCCAGGTGAAATTTTACTGAACTCACCATCATCGTGATCGAATTTTCTGAACTTGGTGATGAGACAGTCCTGAATTCTGACTACCTGAGTGAATCTTGTGTAGGCCGGCCCAAGAATCTGCATCGGGAAGGATTTCGCGTACAGGCAGATGAAGATCTTCGCGGCCGTGCTGATCCGTTTCTTCGTGTTCAAACTTCGCGACAAGAAGGACAACGTCAGTTACAGGACAGCGATTACGCTTGCCATCGATCAGGATCTCCATCTGACTGCTACGGCAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031520