BGIOSGA031524

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Revision as of 04:40, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031524| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031524, complete gene.| tag = OS10G05...")
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Gene Name

BGIOSGA031524

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031524, complete gene.

LocusTag

OS10G0524400

Ensembl Transcript ID

BGIOSGA031524-TA

Ensembl Protein ID

BGIOSGA031524-PA

Length

5861

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19372480..19378340

Sequence Coding Region

19376778..19378340,19376149..19376265,19375642..19375836,19375175..19375423,19375021..19375089
,19374793..19374940,19374467..19374615,19374202..19374363,19373380..19373577
,19372480..19372773

Genome Context

<gbrowseImage1> name=IndicaChromosome10:19372480..19378340 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:19372480..19378340 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGCGGAAACCACGGTGGGGGAGGGTACCCCTACCCGCCGCAGCAGTATCCTTACCCGTACGGGCAGTACCCATACCAGTATCCTCCACCGCAGCAGCAGCCGCCGCCGCCCTCCGCCTACCTCTCGCCGTCCCGTTCGTTCCACGGTTACCCCTCCGCGCCGCCGCCGCAGCCGCAGCCGCAGCCGCAGCCGTACGCGCACCATTCCGCCCCGCTCCAGCCTTACCCGCCGCCGCCGCAGCACCATGCCTACCCGCCGCCGCAGCCGCATCCGCCCTCGCCGTACGTCTACGACCCTTACCACGCGCCCGCCGCGGCGTACCCTTCCTACCCGAGCCCCAACCCCAGCCCGTCCATCTCCCCGAGCTCCAGCTTCCACCACCACCCTGAACCGCCATCGCCATCGCCCTCCGCGCCGTCGTACCCCTCCATTGCGGATGGGCTCGCCAACATGCACGTCTCCGACCGCCACGACTACCCGCCGCCGCCGTCGCCGGCGGCCGTGCCCGCGGCGTCGTCCCCCTCCGTGCTCCCGCCTTCCGCGTCGTTCCCCGGCGGCGGGAGCAGCCACGGCGGTGGCGGGATGCAGATGGTGCCGTACGGCCCTCCTGCCGGAGGGTCGCAGCACGGTGGGATGCAGATGGTGGCGTACGGCTCGCCGGCCGGAGGGTCGCAGCACGGCAGCGTGAGGCCATCCCTGAAGGTGGTGCTGCTCCACGGCACCCTCGACGTCTGGGTGTACGACGCTCGGAACCTCCCGAACAAGGATCTCTTCTCCAAGAGGGTCGGCGACCTCCTCGGTCCGCGCCTCATCGGCGCCGTCGGCAGCAAAATGTCCAGCGCCAACATGACCAGCGACCCCTATGTTACCATCCAGGTCTCCTATGCCACCGTCGCGCGCACCTACGTCGTTCCCAACAATGAGAACCCCGTTTGGACGCAGAATTTCCTTGTCCCTGTTGGGCATGATGCCGCCGAGGTCGAGTTCGTTGTCAAGGACAATGATGTCTTCGGTGCTCAGCTCATAGGCACAGTGTCGATTCCTGCTGAGAAGCTCCTTTTTGGAGAAAGGATTAACGGCATCTACGATGTGCTTGAGTCCAATGGGAAGCCATGCGCTCAAGGTGCTGTGTTGCGGCTGTCCATACAGTACATCCCGGTGGCTCAGCTCAAAATGTATCACCATGGTGTCATTGCCGGCCCAGATAGCCTGGGAGTTCCTAATACTTACTTCCCGATGCGGCGTGGCAATAGAGTGACACTGTATCAGGACGCACATGTGCCTGATGGTTGTCTCCCGGATTTCTGTCTTGATCACGGAATGCGCTATCAGCACGGGCAGTGTTGGCGTGATATCTACAATGCTATATGCCAAGCACGGCGGTTGATTTACATTGTGGGATGGTCAGTGTTCCACACAATCCACCTCATCAGGGAAGGAGTTGAGAAGATGCCATCTCTTGGGGAACTGTTGAAGATGAAGTCACAGGAAGGGGTGAGGGTGTTGCTTCTTGTGTGGGACGATCCAACATCAAGGAGTATTCTTGGAATTAAGACGGATGGTTTCATGGGCACACGAGATGAGGAGACCCGCAGATTTTTCAAGCACTCTTCAGTTCAAGTATTGCTTTGCCCACGATCTGCTGGGAAACGGCACAGCTGGGTGAAACAGCAGGAAACAGGAACCATTTTTACTCATCATCAGAAAACAGTTATTTTGGATGCTGATGCTGGCAATCATAAGAGGAAAATAATTGCTTTTGTTGGTGGCCTCGATTTATGCGGTGGGCGATATGATACACCTAGCCATCCTCTATTTAGGTCTCTTCAGACTGTGCACAAGGAGGATTATTACAATCCAAATTTTGCTACAGTTGATGCTCGTGGCCCAAGGGAACCATGGCACGACTTGCATTCCAAGATTGATGGTCCAGCGGCATATGATGTTTTGCAAAATTTTCAGGAGCGTTGGTTAAAGGCATCCAAACGCCATGGGATTAAAAAGTTAGGAAAATCATATGATGATGCCCTCCTCAGTATTGAAAGAATACCTGATTTTGTAAGCATTAATGACGCAATATATTTTAGTGACAATGATCCAGAGACGTGGCATGTTCAGGTGTTTCGTTCTATTGATTCAAATTCTGCCAAAGGATTTCCAAAGGATCCACGGGAAGCAACCCGCAAGAATCTTGTTTGTGGGAAGAATGTACTGATTGATATGAGCATACATACTGCATATGTCAATGCTATTCGTGGAGCGCAGCACTTCATTTATATTGAGAACCAGTATTTCATTGGATCTTCGTTTAATTGGGATTCAAACAAAGATATTGGGGCTAATAATTTAATACCAATCGAAATTGCTCTCAAAATTGCAAACAAGATAAAGGCAAAAGAGAGATTCTCTGCATATATAGTAATTCCCATGTGGCCTGAGGGTAATCCAACAGGTGCTCCTACACAAAGAATTCTTTACTGGCAGCACAAGACAATGCAAATGATGTACGAAACAATATATAGGGCCCTGAAAGAAGAGGGTCTAGATGATCTATATGAGCCTCAGGATTATCTGAACTTCTTTTGTCTTGGCAATCGTGAAGTTGCTGACAGTCCAAGCACTTCAAACTCAACAAGCACTCCTCAGGAACAAGCTAGGAAACATAGAAGATTCATGGTATATGTACATTCAAAAGGCATGATTGTGGATGATGAATATGTGATAATTGGATCAGCTAATATCAATCAGAGGTCCATGGAAGGTATCAGAGATACTGAGATTGCGATGGGTGCGTATCAGCCACAGTATACATGGGCAAGTAAGGTTTCTGCACCCCGTGGACAGATTTATGGGTACAGAATGTCTCTTTGGGCGGAGCATATTGGAGTGGTTGAGGAAGGCTTCAACTATCCAGAGACCATGGAATGCATGAGACGAGTTCGCCAAATCGGTGAACAGAACTGGGAACGATTTGTTGATAATGAGGTGACTGAGATGAGAGGCCACCTAATGAAGTACCCTGTAAGTGTTGACCGTAAGGGCAAGGTGAAACCCTTGCCAGGATGTACGTCATTCCCAGACATGGGTGGTAACATCTGTGGATCATTCCGAGCCATCCAAGAAAACCTCACAATATGA</cdnaseq>

Protein Sequence

<aaseq>MEGGNHGGGGYPYPPQQYPYPYGQYPYQYPPPQQQPPPPSAYLSPSRSFHGYPSAPPPQPQPQPQPYAHHSAPLQPYPPPPQHHAYPPPQPHPPSPYVYDPYHAPAAAYPSYPSPNPSPSISPSSSFHHHPEPPSPSPSAPSYPSIADGLANMHVSDRHDYPPPPSPAAVPAASSPSVLPPSASFPGGGSSHGGGGMQMVPYGPPAGGSQHGGMQMVAYGSPAGGSQHGSVRPSLKVVLLHGTLDVWVYDARNLPNKDLFSKRVGDLLGPRLIGAVGSKMSSANMTSDPYVTIQVSYATVARTYVVPNNENPVWTQNFLVPVGHDAAEVEFVVKDNDVFGAQLIGTVSIPAEKLLFGERINGIYDVLESNGKPCAQGAVLRLSIQYIPVAQLKMYHHGVIAGPDSLGVPNTYFPMRRGNRVTLYQDAHVPDGCLPDFCLDHGMRYQHGQCWRDIYNAICQARRLIYIVGWSVFHTIHLIREGVEKMPSLGELLKMKSQEGVRVLLLVWDDPTSRSILGIKTDGFMGTRDEETRRFFKHSSVQVLLCPRSAGKRHSWVKQQETGTIFTHHQKTVILDADAGNHKRKIIAFVGGLDLCGGRYDTPSHPLFRSLQTVHKEDYYNPNFATVDARGPREPWHDLHSKIDGPAAYDVLQNFQERWLKASKRHGIKKLGKSYDDALLSIERIPDFVSINDAIYFSDNDPETWHVQVFRSIDSNSAKGFPKDPREATRKNLVCGKNVLIDMSIHTAYVNAIRGAQHFIYIENQYFIGSSFNWDSNKDIGANNLIPIEIALKIANKIKAKERFSAYIVIPMWPEGNPTGAPTQRILYWQHKTMQMMYETIYRALKEEGLDDLYEPQDYLNFFCLGNREVADSPSTSNSTSTPQEQARKHRRFMVYVHSKGMIVDDEYVIIGSANINQRSMEGIRDTEIAMGAYQPQYTWASKVSAPRGQIYGYRMSLWAEHIGVVEEGFNYPETMECMRRVRQIGEQNWERFVDNEVTEMRGHLMKYPVSVDRKGKVKPLPGCTSFPDMGGNICGSFRAIQENLTI</aaseq>

Gene Sequence

<dnaseqindica>1..1563#2076..2192#2505..2699#2918..3166#3252..3320#3401..3548#3726..3874#3978..4139#4764..4961#5568..5861#ATGGAGGGCGGAAACCACGGTGGGGGAGGGTACCCCTACCCGCCGCAGCAGTATCCTTACCCGTACGGGCAGTACCCATACCAGTATCCTCCACCGCAGCAGCAGCCGCCGCCGCCCTCCGCCTACCTCTCGCCGTCCCGTTCGTTCCACGGTTACCCCTCCGCGCCGCCGCCGCAGCCGCAGCCGCAGCCGCAGCCGTACGCGCACCATTCCGCCCCGCTCCAGCCTTACCCGCCGCCGCCGCAGCACCATGCCTACCCGCCGCCGCAGCCGCATCCGCCCTCGCCGTACGTCTACGACCCTTACCACGCGCCCGCCGCGGCGTACCCTTCCTACCCGAGCCCCAACCCCAGCCCGTCCATCTCCCCGAGCTCCAGCTTCCACCACCACCCTGAACCGCCATCGCCATCGCCCTCCGCGCCGTCGTACCCCTCCATTGCGGATGGGCTCGCCAACATGCACGTCTCCGACCGCCACGACTACCCGCCGCCGCCGTCGCCGGCGGCCGTGCCCGCGGCGTCGTCCCCCTCCGTGCTCCCGCCTTCCGCGTCGTTCCCCGGCGGCGGGAGCAGCCACGGCGGTGGCGGGATGCAGATGGTGCCGTACGGCCCTCCTGCCGGAGGGTCGCAGCACGGTGGGATGCAGATGGTGGCGTACGGCTCGCCGGCCGGAGGGTCGCAGCACGGCAGCGTGAGGCCATCCCTGAAGGTGGTGCTGCTCCACGGCACCCTCGACGTCTGGGTGTACGACGCTCGGAACCTCCCGAACAAGGATCTCTTCTCCAAGAGGGTCGGCGACCTCCTCGGTCCGCGCCTCATCGGCGCCGTCGGCAGCAAAATGTCCAGCGCCAACATGACCAGCGACCCCTATGTTACCATCCAGGTCTCCTATGCCACCGTCGCGCGCACCTACGTCGTTCCCAACAATGAGAACCCCGTTTGGACGCAGAATTTCCTTGTCCCTGTTGGGCATGATGCCGCCGAGGTCGAGTTCGTTGTCAAGGACAATGATGTCTTCGGTGCTCAGCTCATAGGCACAGTGTCGATTCCTGCTGAGAAGCTCCTTTTTGGAGAAAGGATTAACGGCATCTACGATGTGCTTGAGTCCAATGGGAAGCCATGCGCTCAAGGTGCTGTGTTGCGGCTGTCCATACAGTACATCCCGGTGGCTCAGCTCAAAATGTATCACCATGGTGTCATTGCCGGCCCAGATAGCCTGGGAGTTCCTAATACTTACTTCCCGATGCGGCGTGGCAATAGAGTGACACTGTATCAGGACGCACATGTGCCTGATGGTTGTCTCCCGGATTTCTGTCTTGATCACGGAATGCGCTATCAGCACGGGCAGTGTTGGCGTGATATCTACAATGCTATATGCCAAGCACGGCGGTTGATTTACATTGTGGGATGGTCAGTGTTCCACACAATCCACCTCATCAGGGAAGGAGTTGAGAAGATGCCATCTCTTGGGGAACTGTTGAAGATGAAGTCACAGGAAGGGGTGAGGGTGTTGCTTCTTGTGTGGGACGATCCAACATCAAGGAGTATTCTTGGAATTAAGACGGTATGAGTTATTCATTGAGTTCAAAATTGCTTTGTTCATGACTTTTACACCGCACTCGAGAACATGATTTTGTGTCCAAACTCCAAACTGCAAATTTATAAATTGAAGTGCTGCAATGTTTTTGGAAAAATTGGGAAACATTGGCACTTGAAGATTTTCCACTCCATTGTCTCATTTGCATGCCCCCCACGATCCACGTGTTGTGGGATATTCTGTGGCAACTCCTCAGTTGTCAATCTTTGCATTGCGTTGTCTAATCCTCAATACACAAATACAAAAAGGCATCAGAAAGGGCATTTTTACAACTGCTGTTATCACATTAAAGAATTTACAAAACATCCGGTTGCATCAATATAACATTGAGAGGATCTTCATCAAGCTCATCTATTTCCTCCAAATTTTTCTGTAATAGTTTGGTAGCTTGTCCTTTAGGTGCATGTACCTTATCTTTGGTCCCATGTTTCATGATGCTGGAAAGTTTGAAGTAGATTATGCTGCTTATCCACTTGTAGGATGGTTTCATGGGCACACGAGATGAGGAGACCCGCAGATTTTTCAAGCACTCTTCAGTTCAAGTATTGCTTTGCCCACGATCTGCTGGGAAACGGCACAGCTGGGTGAAACAGCAGGTATTGTGATGCCACACAAACTTATCCATTATGATATTCCATTTTTGTTTGTCACCTAAATTACTACAATTGATTGCACCAAGTGAGTGGTTTCAAACTTTTTATATGTCTACTCTTCATGCTTGGAAGTTATGCTGTACTTCACAATCGCTGTTCCTTATACCTGATCAGGAAGAGAAATTTGATATTCACATAATGCACACATATATTTGTTGTTGGATTCTTTTGTATAATGGCATTTATCAAACAATTTTGTATTGTATTAATTCTTTTAGTACCATGTATTTATCATATGATGGTATTGAAATTCAGGAAACAGGAACCATTTTTACTCATCATCAGAAAACAGTTATTTTGGATGCTGATGCTGGCAATCATAAGAGGAAAATAATTGCTTTTGTTGGTGGCCTCGATTTATGCGGTGGGCGATATGATACACCTAGCCATCCTCTATTTAGGTCTCTTCAGACTGTGCACAAGGAGGATTATTACAATCCAAATTTTGCTGTAAGTGTTTGATTCCTTTAACATATACTTGTATCTTGATGTGGTTTCTGATGTAAAGCTACAATTAACTTCTTGCTTTTGAGATGATGATAGTAAGAAACGTATCTAATATTTAGTTCCTAACCATGGAATATCTTTCGACAGAAAGCTGTTCCATCTTTCTCTTATCTTTGGTTCCTGAAAGTTTCTTTCTTTCTCTCTGCTTTTTTTTTCTGCAGACAGTTGATGCTCGTGGCCCAAGGGAACCATGGCACGACTTGCATTCCAAGATTGATGGTCCAGCGGCATATGATGTTTTGCAAAATTTTCAGGAGCGTTGGTTAAAGGCATCCAAACGCCATGGGATTAAAAAGTTAGGAAAATCATATGATGATGCCCTCCTCAGTATTGAAAGAATACCTGATTTTGTAAGCATTAATGACGCAATATATTTTAGTGACAATGATCCAGAGACGTGGCATGTTCAGGTATTTATAGTATCTTGTAGTCAGTGTGTGTAAGTTTTTCCTTGTTTTAACTTTCTACTTAAACTTTATTTGCTTTGAAACCTAGGTGTTTCGTTCTATTGATTCAAATTCTGCCAAAGGATTTCCAAAGGATCCACGGGAAGCAACCCGCAAGGTAATTGAGTACTGTTTGCATGTACTAATATTATATTCATTATTATGTGCTTTTCGCTAACACCTTGCTTTGCCTAGCAGAATCTTGTTTGTGGGAAGAATGTACTGATTGATATGAGCATACATACTGCATATGTCAATGCTATTCGTGGAGCGCAGCACTTCATTTATATTGAGAACCAGTATTTCATTGGATCTTCGTTTAATTGGGATTCAAACAAAGATATTGGTAAGCATATGGTGTAAAGTTATTTTTTTAATTAATGTGCACCCACCAATAAAAAAAATCCAGAAACAAAATACGGTGCACATTACATTTTCTTGATTTGCAAACCATTTCAGCAATTCAGAACACAGCAAATCCCTTATCTGATCCTAAATTGGTATTCAAATTGTGAGTTTTCAGGGGCTAATAATTTAATACCAATCGAAATTGCTCTCAAAATTGCAAACAAGATAAAGGCAAAAGAGAGATTCTCTGCATATATAGTAATTCCCATGTGGCCTGAGGGTAATCCAACAGGTGCTCCTACACAAAGAATTCTTTACTGGCAGGTTAGATCAACATGTCTGCTTTGTGTCTTGTTTAATGTTTATATAGATTATACCCAGTTAGTTCATTTGACATGATCGCATGTTTTTTTTGTTGCTCCTGTAGCACAAGACAATGCAAATGATGTACGAAACAATATATAGGGCCCTGAAAGAAGAGGGTCTAGATGATCTATATGAGCCTCAGGATTATCTGAACTTCTTTTGTCTTGGCAATCGTGAAGTTGCTGACAGTCCAAGCACTTCAAACTCAACAAGCACTCCTCAGGTAAGACGTCTTGTTTTTTCCTTTGACAAACTATGCTGAGGACCCTCCATTGGTTTTAGTTTTCCCTGCAAGGTTAAATGCTTTTTTTTTTCATTTATAGTATTAAATATAGTAATTAATGTCACATTGAATTTTCAACAAAAGTCACAATATGGTCCCTTAAGCCTGCGTCATACGAGAATGTGAAAGCTGCTGATCTTGCCGACCTCTGAAGATAAATTTTGCTCTGACTTGACATATTACACTGGTTCTTAAAGGATATTGATATCAAGTCTTGTTCTCTGATCCTACATGGGGGCCAAATATCCAATCCACTTTAGTTTCTTTATCAGATGATACATGGAAATTCTGGTTTTGTACACTTGTGCCTTTTATTTAGCAGAAAACATTCGATCGGTTAGAATGATTTGGCTCAATTGTCTAGATGTTCTATAATAATGTTTCATCTTGTTGGAGCACTGTGTATAGTATTTAACTTTTGATTTATCAAAATTACAGGATATATTAATATGTATGATTTGCTTGCTAGCAATCTCGCTGAACTTTGTTATTTTTTTAACATCTGACTTGCATGAAAACTGCCTGCATGCAACCTCGTTCATTTATTCTACATTTACTACCCAGGAACAAGCTAGGAAACATAGAAGATTCATGGTATATGTACATTCAAAAGGCATGATTGTGGATGATGAATATGTGATAATTGGATCAGCTAATATCAATCAGAGGTCCATGGAAGGTATCAGAGATACTGAGATTGCGATGGGTGCGTATCAGCCACAGTATACATGGGCAAGTAAGGTTTCTGCACCCCGTGGACAGGTAACAACACTTCATGCCTGTATGGCTGTATCACATTTCTGGAGATCTACAGAGAACCGAGCTGGCATCATATGCTCATATATTAAACATTGCGCCTTCAGTGATTGTACATTTGCAACTCGTTTGCTTTACACTGTTATTGTCTGTTGTTCAGCACTACTGCATCAATCCAGCCATATATATTTGTTGCAATTATCTTTTGTTTTGGCAGAGTAACCTAAAGGGAAATTCGCACCCTATCAATCATATTTTTTTAGATAAGGCTAAAAAAAGCTACCACTCACTCTTAAGAATATGTTAATTGGAAGAAAAAAAGAGAAGCTACCATTCATTCTCAAGAATATGTTAATTGAAGAAAAAGAGAGCTATCTACACCATCCATCATGGTGGGACCAGATTGTAGCTACAAATGTATGGAAAATACAAATGTATTTGTAGAAATAGAGAAAAAGTTGCATATCAAGTACAGTCATATTTCAAATAGCCCTGTACAACTGTGAAGGAATCTCGACTAGTTGTCTCTTGGTTTGAGGGATATACCTATTGTAGGATGACTGATATTTCTAGAACCACACTCTAATTCAAATCTGCTGATTTCATGTGTAGATTTATGGGTACAGAATGTCTCTTTGGGCGGAGCATATTGGAGTGGTTGAGGAAGGCTTCAACTATCCAGAGACCATGGAATGCATGAGACGAGTTCGCCAAATCGGTGAACAGAACTGGGAACGATTTGTTGATAATGAGGTGACTGAGATGAGAGGCCACCTAATGAAGTACCCTGTAAGTGTTGACCGTAAGGGCAAGGTGAAACCCTTGCCAGGATGTACGTCATTCCCAGACATGGGTGGTAACATCTGTGGATCATTCCGAGCCATCCAAGAAAACCTCACAATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031524

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA031524&oldid=30746"