BGIOSGA031567

From RiceWiki
Revision as of 04:41, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031567| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031567, complete gene.| tag = OS10G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031567

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031567, complete gene.

LocusTag

OS10G0512100

Ensembl Transcript ID

BGIOSGA031567-TA

Ensembl Protein ID

BGIOSGA031567-PA

Length

4267

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18674608..18678874

Sequence Coding Region

18678651..18678874,18678504..18678585,18678024..18678422,18677166..18677331,18676924..18677076
,18676697..18676794,18676472..18676563,18676159..18676229,18675919..18676054
,18675571..18675630,18675412..18675494,18675264..18675340,18674984..18675054
,18674839..18674896,18674608..18674757

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18674608..18678874 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18674608..18678874 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGTCGTCGACGCTGAGCCAGACGCAGCGGTACGCGGCGGGGGCGCTCCTGGCGCTCGCGCTCCGCCAGGCGCAGATCCACCAGTCCGTCCTGCTCGGATCCCACGGCCTCGACGACGCCCCGGCCGCCGCTGCCGCAGTCCCCTCTCTCGCCGACCCCGTCGACGCCCGCCACCTCTGGACCCACGACTCCCACGGCCTCCTCCGCCCCGTCCTCAGGTTTCTCGAGATCGACCACAAGGCATGGCCGGGCGTGGAGACGACGGCCGCCACCTCCGAGCCCAAGCACCACATCGGAGCCTTTCTCCGGAAGGTGTTCGAGGACGAGGACGACGGCGAGGCGGCGGCGGCGGAGAGGTCGGAGCAGGAGCTCGCGCTCGCCAAGGCCGTCGAGGCGATGGCGATGGGGCTGGAGAACGACGTCGTCGCGGCCGACGAGCTGATCAAGGCCACCGGCTCCGGGGGGGACGGCGACGAAGGGTGGCCGTGGCTGGCGTCGGCGTCGTCGGCCGGCGGCAGCCGCACCAAGGATTACCGGAAGATGGCGGTGCTGTACATGCTCCTCTCGGCGTGCGTCGCCGACGTGAACATGGCGGAGGAAGGCATGGGCTCGCCTCGCATCAGGAGGGGCTACGACGCCCGCCACCGCGTCGCGCTCCGGCTGCTCGCGACATGGCTCGACGTCAAGTGGATCAAGATGGAAGCTATCGAGATAATGGTTGCTTGCTCTGCTATGGCTGCAGCGAGAGAGGAAGAACAGTCAGAAGGAAGCGAGTCACCAAGAAGCAGATGGGAGAACTGGAAGCGTGGAGGAATCATCGGCGCAGCCGCCTTGACGGGAGGAACGCTGATGGCCATCTCCGGGGGTTTAGCTGCTCCAGCAATTGCTGCAGGATTCACTGCTCTGGTTCCAACATTGCACACACTTATCCCTTTAATAGGAGCTAGTGGGTTTGCTGCTATAGCTACTGCTGCTGGACATACTGCAGGCTCTGTAGCGGTTGCTGCATCATTCGGAGCTGCTGGAGCTGGGTTGACTGGGACCAAAATGGCCAAAAGAATTGGTTGTGTGAGAGAATTTGAGTTCAACACTATCGGCGAGAACCATAACCAGGGTCGGCTAGCAGTTGCCATCTTGGTCACTGGATTTGCCTTTACCGAGGAAGATTATATGAAGCCATGGGAAGGATGGAAGACAAACTTAGAGAGGTACATTCTGCAATGGGAGTCTAAGCATATAATTGGCGTCAGTACAGCAATACGCGATTGGCTGGCATCAAGATTTGCAATTGAGTTGATGAGGGAAGGTGCAATGCAAACTGTGTTAAGTGGTATTGTTTCTGCGTTTGCATGGCCGGCTTACTTGGTATCTGCTGCAGATTTTATCGATAGTAAATGGTCCATTGCTATTGACAGGGCAGATAAGACTGGGAAAATGCTTGCTGAAGTGCTGCTCAGAGGATTGCAAGGAAGCAGGCCTGTCACTCTCATCGGGTTTTCCCTAGGGGCACGTGTTGTCTTCAAGTGTTTGGAGGAACTAGCTTTGTTGGGAAATAATGAGGGACTCGTTGAAAGAGCTGTGATGATAGGTGCACCAGTTTCAGATAAGGAGGAGCTGTGGGAGTCTACCAGGAAGATGGTTGCTGGACGATTTGTGAATGTTTACTCCACAAATGATTGGATTCTCGGTATCACTTTTCGAGCAAGCCTGCTTTCACAAGGCTTGGCCGGCATCCAAGCAGTTAATGTACCTGGAGTTGAAAATGTTGATGCCAGTGAGCTCATCGTCGGACATTCTTCCTACTTGACACTTGTCAATCAAATCCTGGACCAGCTTGAGCTGAACACCTACTATCCTGTCTTCTATCCCAGCACACCAAAGTGCGGCACACCGAAGTCAAAGTTACCACTGTAA</cdnaseq>

Protein Sequence

<aaseq>MATSSTLSQTQRYAAGALLALALRQAQIHQSVLLGSHGLDDAPAAAAAVPSLADPVDARHLWTHDSHGLLRPVLRFLEIDHKAWPGVETTAATSEPKHHIGAFLRKVFEDEDDGEAAAAERSEQELALAKAVEAMAMGLENDVVAADELIKATGSGGDGDEGWPWLASASSAGGSRTKDYRKMAVLYMLLSACVADVNMAEEGMGSPRIRRGYDARHRVALRLLATWLDVKWIKMEAIEIMVACSAMAAAREEEQSEGSESPRSRWENWKRGGIIGAAALTGGTLMAISGGLAAPAIAAGFTALVPTLHTLIPLIGASGFAAIATAAGHTAGSVAVAASFGAAGAGLTGTKMAKRIGCVREFEFNTIGENHNQGRLAVAILVTGFAFTEEDYMKPWEGWKTNLERYILQWESKHIIGVSTAIRDWLASRFAIELMREGAMQTVLSGIVSAFAWPAYLVSAADFIDSKWSIAIDRADKTGKMLAEVLLRGLQGSRPVTLIGFSLGARVVFKCLEELALLGNNEGLVERAVMIGAPVSDKEELWESTRKMVAGRFVNVYSTNDWILGITFRASLLSQGLAGIQAVNVPGVENVDASELIVGHSSYLTLVNQILDQLELNTYYPVFYPSTPKCGTPKSKLPL</aaseq>

Gene Sequence

<dnaseqindica>1..224#290..371#453..851#1544..1709#1799..1951#2081..2178#2312..2403#2646..2716#2821..2956#3245..3304#3381..3463#3535..3611#3821..3891#3979..4036#4118..4267#ATGGCGACGTCGTCGACGCTGAGCCAGACGCAGCGGTACGCGGCGGGGGCGCTCCTGGCGCTCGCGCTCCGCCAGGCGCAGATCCACCAGTCCGTCCTGCTCGGATCCCACGGCCTCGACGACGCCCCGGCCGCCGCTGCCGCAGTCCCCTCTCTCGCCGACCCCGTCGACGCCCGCCACCTCTGGACCCACGACTCCCACGGCCTCCTCCGCCCCGTCCTCAGGTATCCATCTCCAAACCCCATCAAATCGATCGATGGATCGCCATTGATTGATGAATTTCTCTCAGGTTTCTCGAGATCGACCACAAGGCATGGCCGGGCGTGGAGACGACGGCCGCCACCTCCGAGCCCAAGCACCACATCGGAGCCGTACGCGCCCCAATGCAATCTCCAATGTAAAACCATTTCCATGGCGATTCAATCGTGACATACTTTTTTTTTCCTTCTCAGTTTCTCCGGAAGGTGTTCGAGGACGAGGACGACGGCGAGGCGGCGGCGGCGGAGAGGTCGGAGCAGGAGCTCGCGCTCGCCAAGGCCGTCGAGGCGATGGCGATGGGGCTGGAGAACGACGTCGTCGCGGCCGACGAGCTGATCAAGGCCACCGGCTCCGGGGGGGACGGCGACGAAGGGTGGCCGTGGCTGGCGTCGGCGTCGTCGGCCGGCGGCAGCCGCACCAAGGATTACCGGAAGATGGCGGTGCTGTACATGCTCCTCTCGGCGTGCGTCGCCGACGTGAACATGGCGGAGGAAGGCATGGGCTCGCCTCGCATCAGGAGGGGCTACGACGCCCGCCACCGCGTCGCGCTCCGGCTGCTCGCGACATGGCTCGACGTCAAGTGGATCAAGATGGTAAGATTTGTCCAGAGATTCCATTGCTTTTCTTACAAGATAAGATCACTAACACTCCCTCTGATCATAGGTAGTCCATCCGTTCCAAAATATAAGGGATTGGAGTAGGATAGGACACATCCATGTCCAGATTCGTACTACTAGAATTTGTCACAACCAGCCAAAATTATTTATATTTTGGGACGGATGGAGTATTTGATTTGATGTTTAGGACAAGATTCTAAACTTGTAAAACTATGACCATATAATTTTTTTGTTAGAATGAGTTTATAAAATAGAATAAGTTTCAATGTTACGATATTACTATTCAAGGGAAATTTGCTTACACCATTTTTTAACTAGGAATTTCGAGGAATTATTCATGGTCAAAGTTTCAAAAGAAGTTTGACTAACTTGTCCTAAGCATCAAATGTTTTATGACCATAGTGTCCAGTAGTCTCATTATCTGTGATCACTAGATTAGTTTTTTCATGAAAATGCTAGAAGTCTAGAACACATGACAGGGTACATTTAGCACAGCATTCTCTTTTTTTTTTGGATAACAGCACAGCATTCTCGTCCATGTGAAATTAGGATAGAAAGAAAGCCTAGTTGTACATGTAAATGCACAGGCTAAGAACAGTGATCTCTCTACCAGTTTTGTCATGGACACAAACTATATGTTTTTGTAATCGAACGTTTTGGCATTGTAGGAAGCTATCGAGATAATGGTTGCTTGCTCTGCTATGGCTGCAGCGAGAGAGGAAGAACAGTCAGAAGGAAGCGAGTCACCAAGAAGCAGATGGGAGAACTGGAAGCGTGGAGGAATCATCGGCGCAGCCGCCTTGACGGGAGGAACGCTGATGGCCATCTCCGGGGGTATATGACCTGAAAGAAATTTGGATGAACTTATGAAATGTCAGATCAAGATAAGTTCTGTAACTGAATAATTTCGTCTGAACTTTCAGGTTTAGCTGCTCCAGCAATTGCTGCAGGATTCACTGCTCTGGTTCCAACATTGCACACACTTATCCCTTTAATAGGAGCTAGTGGGTTTGCTGCTATAGCTACTGCTGCTGGACATACTGCAGGCTCTGTAGCGGTTGCTGCATCATTCGGAGGTGAGCGTAGATGGTTTTTGAATATTAATTTGGTGATACTATTCCTTATTTGGAGGTGTTTATTTCTGAACCCAGCAGGAATCTTTTATCAGGATCTGTAACTAACCAGCATCTTAACTTGAAAATCAGCTGCTGGAGCTGGGTTGACTGGGACCAAAATGGCCAAAAGAATTGGTTGTGTGAGAGAATTTGAGTTCAACACTATCGGCGAGAACCATAACCAGGGTGTGAGTTTTTGTTCTCTTGTGTTATTTTGATTCGATGTTGGAAAGGTTCAGAGAGCATAAAGCAAAGATGTTATCCCTAGTCTTCGATAAAACTTTTTCGAGTGGATGACACTTAATAGGATTGACATTTCAGCGGCTAGCAGTTGCCATCTTGGTCACTGGATTTGCCTTTACCGAGGAAGATTATATGAAGCCATGGGAAGGATGGAAGACAAACTTAGAGAGGTACAACCCCCCAAAAGACATTCACACGAAATACTTTTTCAAAAAAAAAGTTCTCTTTGCAGTTTGCAAGTACTTTGGTATTAACATAGCCATGATAGTCCTATTGCATTCTGTTTAGAAACCAAAATATTCACATGAGATGAATACAGGTAAGATTCATGCAGCTGTTGTCCCTATCAATATCGTTGCATTTTCTAGAACATGTTTGCCTTGCTTAAGTACAAGAAACTTGTAATTGGCAGGTACATTCTGCAATGGGAGTCTAAGCATATAATTGGCGTCAGTACAGCAATACGCGATTGGCTGGCATCAAGTAATTTTGGCGTTCGACGTGTACAGTGTTTGCGTTTATTTCTTTCTTTCATACTTTACTGATTACTCAACATAAAATTGTCCGGTTGTTGGTTAATGATGTAGGATTTGCAATTGAGTTGATGAGGGAAGGTGCAATGCAAACTGTGTTAAGTGGTATTGTTTCTGCGTTTGCATGGCCGGCTTACTTGGTATCTGCTGCAGATTTTATCGATAGTAAATGGTCCATTGCTATTGACAGGTGACATAATGAACTCTCATTACATAAACTAATGCTGATGCATTTTTCCCTTTTCTGTACAAAACTGGTCTTTTTTTTTTCATTAGTTGTACAAAAGCTGAAAACAGAACAGAGAATACAATTATCTTGAAACTAATGAGCAATGTGTTCGCGAAAAAGAAACTAATGAGCAATGATAAAAACGAAAAAATGCAACAAACTTAAAGCTGTAATGTATGCATTAATCTTTTTTTATCCTTTCCAAAATTACATGAGCGCACAAGAAATTAATTGAGTAGATGTTTCCAGGGCAGATAAGACTGGGAAAATGCTTGCTGAAGTGCTGCTCAGAGGATTGCAAGGAAGCAGGTAATTCTCTGCCTAGAATGTACAATCCAGTAGACTTCATTTCTCAATGGAACTAATTTTTTACTGGGATTTCTAGGCCTGTCACTCTCATCGGGTTTTCCCTAGGGGCACGTGTTGTCTTCAAGTGTTTGGAGGAACTAGCTTTGTTGGGAAATAATGGTACCTCTTAACTATGTGCATATATGAAACTTTATTTATAGCTTGTTTGGCTGACCTTTCATTGTGAATAGAGGGACTCGTTGAAAGAGCTGTGATGATAGGTGCACCAGTTTCAGATAAGGAGGAGCTGTGGGAGTCTACCAGGAAGGTATGGTAGTTCTATAGATTCCAACTGCTTGAAACTATAGCCTTGAGCACATTACTAACTCTTATGTGAATTTTACACTACTGTACTGAAAGTAAAGTCACAAATGAAATGAGTGCTAATTGCTCGAAGAAACCACCTATAATTTTAGCAAATCTTACCTTGCTCCATGTCATCTTCTCACTAGTATGGATGGCCATGCATTTCCGCAGATGGTTGCTGGACGATTTGTGAATGTTTACTCCACAAATGATTGGATTCTCGGTATCACTTTTCGAGCAAGGTAAATCTGACTCATATTTCAGAATCACTATCACAGATTGTGGATGTGGAGTCATCATTTTTTCCATGAAAATGATCTCTCATGTAGCCTGCTTTCACAAGGCTTGGCCGGCATCCAAGCAGTTAATGTACCTGGAGTTGAAAATGTAAGTGTGTTGCGGCATTCAACTGGGCCAAAAAATTTCCTCTATACAGCTAAAAACTCGATAATATTTCTGAACTCACAGGTTGATGCCAGTGAGCTCATCGTCGGACATTCTTCCTACTTGACACTTGTCAATCAAATCCTGGACCAGCTTGAGCTGAACACCTACTATCCTGTCTTCTATCCCAGCACACCAAAGTGCGGCACACCGAAGTCAAAGTTACCACTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031567