BGIOSGA031613

From RiceWiki
Revision as of 04:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031613| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031613, complete gene.| tag = OS10G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031613

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031613, complete gene.

LocusTag

OS10G0498600

Ensembl Transcript ID

BGIOSGA031613-TA

Ensembl Protein ID

BGIOSGA031613-PA

Length

3120

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17946127..17949246

Sequence Coding Region

17946127..17949246

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17946127..17949246 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17946127..17949246 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTTCGTCCGCGCGCCGGACGGGAGGACCCACCACGTCGACCTCGACCCCTCCACCGCCACGCTCGCCGACCTCACGGCCTCCGCCTCCCGCGTCTGCGGCGGCGTCCCGCCGGAGCAGCTGCGGCTCTACCTCGCCCACCGCCGCCTCCTCCCGGCCGAGCCGTCCCCGCTGCTGTCCTCCCTCCGGGTCTCGGCCTCCTCCTCCCTGCTACTCCACCTCCCCCTGCTCGGAGGGATGACCGGCCCGACGACGACCCCCGCGGCACCCCCGCCCCCGCCGCCGCCGTCGGCGCAGCCGCCCGCCCGCCCCGCGCGCTACGACTTCCTCAACTCCAAGCCGCCCCCGAACTACGTGGCCGGTCTGGGGCGTGGCGCCACCGGGTTCACCACCCGTTCGGATATCGGGCCGGCCCGCGCGGCGCCCGATCTGCCTGACCGGTCCGCCGCCGCCGCCGCCGCCCCCGCCGTCGGGCGCGGCCGTGGGAAGCCACCCGGGGACGACGACGGCGACGACGATGGCGGCGACGAGGAGAAGGGGTACGACGAGAACCAGAAGTTCGACGAGTTCGAGGGCAACGACGCCGGGCTGTTCTCCAACGCCGACTACGACGACGACGACCGCGAGGCGGATGCGGTCTGGGAGAGCATCGACCAGAGGATGGACTCTCGCCGGAAGGATCGGCGGGAGGCGCGGCTGAAGCAGGAGATCGAGAAGTACCGTGCTTCCAACCCTAAGATCACCGAGCAATTCGCTGATTTGAAGCGTAAGTTGGTCGATTTGTCGGCGCAGGAGTGGGAAAGCATACCTGAAATTGGGGACTACTCGCTGCGCAACAAGAAGAAGCGATTTGAGAGCTTCGTTCCCGTGCCGGACACCCTGCTCGAGAAGGCTCGGCAGGAGCAGGAGCATGTCACGGCACTGGATCCCAAGAGCCGTGCAGCTGGTGGCACCGAGACGCCATGGGCGCAGACTCCGGTTACCGATCTGACGGCTGTGGGCGAAGGTCGTGGCACCGTGCTCTCCTTGAAGCTGGACAGGTTGTCGGATTCGGTATCTGGTCTTACTGTTGTTGATCCAAAGGGTTACTTGACGGACCTGAAAAGTATGAAGATTACTAGTGATGCTGAGATTTCTGACATTAAAAAGGCGCGATTGTTGCTTAAGTCAGTGACACAGACAAACCCGAAGCATCCACCAGGATGGATTGCTGCTGCTAGGCTTGAAGAGGTTGCTGGCAAGCTTCAGGTTGCTCGGCAGCTTATCCAGCGTGGCTGTGAGGAGTGCCCCACAAATGAGGATGTTTGGGTCGAGGCATGCCGGCTGGCCAGCCCAGACGAGGCAAAGGCAGTGATTGCTAGGGGCGTGAAGGCAATTCCCAATTCTGTGAAGCTGTGGTTGCAGGCAGCAAAGTTGGAAACTAGTGATTTGAATAAGAGCAGGGTTTTGAGAAAAGGGTTGGAACACATTCCTGATTCAGTCAGACTGTGGAAAGCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGACTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCACTCCATGTGGAACTGTGGCTTGCCCTAGCAAGGCTGGAGACATATGACCAAGCAAAGAAGGTACTTAACAAGGCAAGAGAAAAGCTTCCTAAGGAGCCTGCCATCTGGATTACAGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCCAGTCAGTAATCAAGGTGATTGAGAGAAGTATAAAAACTTTACAGAGAGAAGGATTGGATATTGACAGGGAGGCATGGCTAAAGGAAGCAGAAGCTGCTGAGCGTGCTGGATCTGTATTGACTTGCCAGGCCATAGTTAAGAGCACTATTGGCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGGGTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTATGCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTTGGCTGAAAGCGGCTCAGCTTGAGAAGAGCCATGGAACCAAGGAGTCTCTTTATAATCTCCTCAGAAAGGCTGTTACCTACAATCCACGTGCAGAAGTTTTATGGCTTATGAGTGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCGGCTGCCCGAGCCATTCTTCAGGAAGCTTATGCTTCTCTCCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCGATTGTTGAAAGGGAGTTAGGGAATGTAGACGAAGAAAGGAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAGCTGTGGTTAATGCTTGGACAAATGGAAGACCGGCTTGGCCATGGATCCAAGGCAAAGGAGGTTTACGAGAATGCGCTGAAGCACTGCCCGAGTTGCATCCCTCTTTGGCTCTCTCTAGCTAATCTAGAGGAGAAGATAAATGGCTTGAGCAAGTCACGTGCTGTCCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTAGGGCTGAATTGAGACATGGGAACAAGAAGGAAGCTGATGCTCTACTAGCCAAGGCATTACAGGAATGCCCGACAAGTGGTATTTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAGCGTAAAGCAAAGAGCTCAGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCTGTGGCCAAACTTTTCTGGCATGATAGGAAGGTTGATAAAGCTAGAAGTTGGTTGAATAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTTGAACTGCAACATGGAAATGCTGATACACAAAAGGATGTCCTACAAAGATGTGTTGCAGCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAACAAAGGCTGTTGAGAACTCACATCTGTCAATTGAGGCCCTTCTGAAGAAAGCTGTGTTGGCTCTTGGCCAGGAAGAAAATCCAAATGCTGCAGATCCCTAG</cdnaseq>

Protein Sequence

<aaseq>MVFVRAPDGRTHHVDLDPSTATLADLTASASRVCGGVPPEQLRLYLAHRRLLPAEPSPLLSSLRVSASSSLLLHLPLLGGMTGPTTTPAAPPPPPPPSAQPPARPARYDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSAAAAAAPAVGRGRGKPPGDDDGDDDGGDEEKGYDENQKFDEFEGNDAGLFSNADYDDDDREADAVWESIDQRMDSRRKDRREARLKQEIEKYRASNPKITEQFADLKRKLVDLSAQEWESIPEIGDYSLRNKKKRFESFVPVPDTLLEKARQEQEHVTALDPKSRAAGGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKLQVARQLIQRGCEECPTNEDVWVEACRLASPDEAKAVIARGVKAIPNSVKLWLQAAKLETSDLNKSRVLRKGLEHIPDSVRLWKAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYDQAKKVLNKAREKLPKEPAIWITAAKLEEANGNTQSVIKVIERSIKTLQREGLDIDREAWLKEAEAAERAGSVLTCQAIVKSTIGIGVDEEDRKRTWVADAEECKKRGSIETARAIYAHALSVFVSKKSIWLKAAQLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMSAKEKWLAGDVPAARAILQEAYASLPNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEERKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVYENALKHCPSCIPLWLSLANLEEKINGLSKSRAVLTMARKKNPATPELWLAAVRAELRHGNKKEADALLAKALQECPTSGILWAAAIEMVPRPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVTLAPDIGDFWALYYKFELQHGNADTQKDVLQRCVAAEPKHGERWQAITKAVENSHLSIEALLKKAVLALGQEENPNAADP</aaseq>

Gene Sequence

<dnaseqindica>1..3120#ATGGTGTTCGTCCGCGCGCCGGACGGGAGGACCCACCACGTCGACCTCGACCCCTCCACCGCCACGCTCGCCGACCTCACGGCCTCCGCCTCCCGCGTCTGCGGCGGCGTCCCGCCGGAGCAGCTGCGGCTCTACCTCGCCCACCGCCGCCTCCTCCCGGCCGAGCCGTCCCCGCTGCTGTCCTCCCTCCGGGTCTCGGCCTCCTCCTCCCTGCTACTCCACCTCCCCCTGCTCGGAGGGATGACCGGCCCGACGACGACCCCCGCGGCACCCCCGCCCCCGCCGCCGCCGTCGGCGCAGCCGCCCGCCCGCCCCGCGCGCTACGACTTCCTCAACTCCAAGCCGCCCCCGAACTACGTGGCCGGTCTGGGGCGTGGCGCCACCGGGTTCACCACCCGTTCGGATATCGGGCCGGCCCGCGCGGCGCCCGATCTGCCTGACCGGTCCGCCGCCGCCGCCGCCGCCCCCGCCGTCGGGCGCGGCCGTGGGAAGCCACCCGGGGACGACGACGGCGACGACGATGGCGGCGACGAGGAGAAGGGGTACGACGAGAACCAGAAGTTCGACGAGTTCGAGGGCAACGACGCCGGGCTGTTCTCCAACGCCGACTACGACGACGACGACCGCGAGGCGGATGCGGTCTGGGAGAGCATCGACCAGAGGATGGACTCTCGCCGGAAGGATCGGCGGGAGGCGCGGCTGAAGCAGGAGATCGAGAAGTACCGTGCTTCCAACCCTAAGATCACCGAGCAATTCGCTGATTTGAAGCGTAAGTTGGTCGATTTGTCGGCGCAGGAGTGGGAAAGCATACCTGAAATTGGGGACTACTCGCTGCGCAACAAGAAGAAGCGATTTGAGAGCTTCGTTCCCGTGCCGGACACCCTGCTCGAGAAGGCTCGGCAGGAGCAGGAGCATGTCACGGCACTGGATCCCAAGAGCCGTGCAGCTGGTGGCACCGAGACGCCATGGGCGCAGACTCCGGTTACCGATCTGACGGCTGTGGGCGAAGGTCGTGGCACCGTGCTCTCCTTGAAGCTGGACAGGTTGTCGGATTCGGTATCTGGTCTTACTGTTGTTGATCCAAAGGGTTACTTGACGGACCTGAAAAGTATGAAGATTACTAGTGATGCTGAGATTTCTGACATTAAAAAGGCGCGATTGTTGCTTAAGTCAGTGACACAGACAAACCCGAAGCATCCACCAGGATGGATTGCTGCTGCTAGGCTTGAAGAGGTTGCTGGCAAGCTTCAGGTTGCTCGGCAGCTTATCCAGCGTGGCTGTGAGGAGTGCCCCACAAATGAGGATGTTTGGGTCGAGGCATGCCGGCTGGCCAGCCCAGACGAGGCAAAGGCAGTGATTGCTAGGGGCGTGAAGGCAATTCCCAATTCTGTGAAGCTGTGGTTGCAGGCAGCAAAGTTGGAAACTAGTGATTTGAATAAGAGCAGGGTTTTGAGAAAAGGGTTGGAACACATTCCTGATTCAGTCAGACTGTGGAAAGCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGACTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCACTCCATGTGGAACTGTGGCTTGCCCTAGCAAGGCTGGAGACATATGACCAAGCAAAGAAGGTACTTAACAAGGCAAGAGAAAAGCTTCCTAAGGAGCCTGCCATCTGGATTACAGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCCAGTCAGTAATCAAGGTGATTGAGAGAAGTATAAAAACTTTACAGAGAGAAGGATTGGATATTGACAGGGAGGCATGGCTAAAGGAAGCAGAAGCTGCTGAGCGTGCTGGATCTGTATTGACTTGCCAGGCCATAGTTAAGAGCACTATTGGCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGGGTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTATGCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTTGGCTGAAAGCGGCTCAGCTTGAGAAGAGCCATGGAACCAAGGAGTCTCTTTATAATCTCCTCAGAAAGGCTGTTACCTACAATCCACGTGCAGAAGTTTTATGGCTTATGAGTGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCGGCTGCCCGAGCCATTCTTCAGGAAGCTTATGCTTCTCTCCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCGATTGTTGAAAGGGAGTTAGGGAATGTAGACGAAGAAAGGAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAGCTGTGGTTAATGCTTGGACAAATGGAAGACCGGCTTGGCCATGGATCCAAGGCAAAGGAGGTTTACGAGAATGCGCTGAAGCACTGCCCGAGTTGCATCCCTCTTTGGCTCTCTCTAGCTAATCTAGAGGAGAAGATAAATGGCTTGAGCAAGTCACGTGCTGTCCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTAGGGCTGAATTGAGACATGGGAACAAGAAGGAAGCTGATGCTCTACTAGCCAAGGCATTACAGGAATGCCCGACAAGTGGTATTTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAGCGTAAAGCAAAGAGCTCAGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCTGTGGCCAAACTTTTCTGGCATGATAGGAAGGTTGATAAAGCTAGAAGTTGGTTGAATAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTTGAACTGCAACATGGAAATGCTGATACACAAAAGGATGTCCTACAAAGATGTGTTGCAGCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAACAAAGGCTGTTGAGAACTCACATCTGTCAATTGAGGCCCTTCTGAAGAAAGCTGTGTTGGCTCTTGGCCAGGAAGAAAATCCAAATGCTGCAGATCCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031613