BGIOSGA031653

From RiceWiki
Revision as of 04:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031653| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031653, complete gene.| tag = B1288B1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031653

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031653, complete gene.

LocusTag

B1288B10.3

Ensembl Transcript ID

BGIOSGA031653-TA

Ensembl Protein ID

BGIOSGA031653-PA

Length

5408

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17434974..17440381

Sequence Coding Region

17440085..17440381,17439875..17439991,17439548..17439649,17439350..17439463,17438576..17438806
,17438400..17438494,17437949..17438036,17437602..17437733,17437171..17437283
,17436654..17436755,17436401..17436462,17436216..17436287,17436068..17436141
,17435904..17435960,17435294..17435371,17435130..17435207,17434974..17435045

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17434974..17440381 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17434974..17440381 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCTGCTTATTGGAGCCCCGAGGAGCCCGTGCCGTTCCTGTTCCTCGCTCGAGCACTTGACCTCATCTCTAATGAGTCTGGAAGGATTGTTATCACGGAGATCCTATCGAATGTCTTCCGCACGGTGATTGCCACAACACCAGAGGATCTCCTCGCGACAGTATACCTCTCAGCCAACCGGATTGCGCCGCCTCATGAAGGGACTGAACTTGGAATTGGGGATGCATCAATTATCCGTGCACTTGCGGAGGCATACGGCCGCAGAGAGGAGCATGTCAAGAAGAACCTAAAGGAGTTGGGCGATTTGGGGCTTGTTGCAAAAGCAAGCAGGTTGTCACAGAAGATGATGTACAAACCGAAACCACTGACGATCTCACATGTACTTGCAAAATTCCGGACAATTGCAAAGGAATCAGGCAAAGATAGTCAAGATAAGAAAAGAAATCATATCAAAGGACTTCTCGTTGCCGCAACTGACTGTGAACCTCAATACATTACACGACTACTTCAGTCGAAGATGAGGATTGGGTTAGCAGAAAAAACCGTCCAGATGGCTCTTGGGCAAGCTGCTGTGTATTCTGAAAAACATTCTCCACCGTCAAAAATCCAATCCCCTTTTGAAGAGGCTGCAAAAATAATTAAACAAGTATATTCAGTTCTTCCAATATACGATAAAATTGTCCCAGCTATTCTAGAAGTTGGTGTTTGGAAACTTCCAGAGATATGCAGTTTTTCTATTGGTGTTCCTGTTGGTCCTATGTTGGCAAAAGCAACAAAGTCTGTCTCAGAGATCATAGACAAATTTCAGGGTCTTGAGTACACTTGTGAGTACAAGTATGATGGTGAACGGGCTCAGATACATTGCCTGGAAGATGGATCAGTAGAGATCTATAGTCGTAATGCTGAGAGGAACACTGGGAAGTATCCTGATGTTGTTGATGCGGTTTCTAGATTCCGGAAGCCTACAGTCAAATCATTTGTCTTGGACTGTGAAATTGTTGCTTATGACCGTGAAAAGAAGAAAATATTACCTTTTCAGATACTTAGCACACGGGCCCGCAAGGGTGTTACCATAAGTGATATCAAAGTGTCAGTCTGTACTTTTGGCTTTGATATTCTTTACATCAATGGCAAGCCTCTTCTCCAGGAACAACTGAAAGTTCGACGAGAGCATCTTTACAACTCCTTTGAGGAAGTACCAGGTGTTTTTCAATTGGCAACTTCAATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTCGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGGCATACTATAGGTTTGCTGACACAATGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATCTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAYWSPEEPVPFLFLARALDLISNESGRIVITEILSNVFRTVIATTPEDLLATVYLSANRIAPPHEGTELGIGDASIIRALAEAYGRREEHVKKNLKELGDLGLVAKASRLSQKMMYKPKPLTISHVLAKFRTIAKESGKDSQDKKRNHIKGLLVAATDCEPQYITRLLQSKMRIGLAEKTVQMALGQAAVYSEKHSPPSKIQSPFEEAAKIIKQVYSVLPIYDKIVPAILEVGVWKLPEICSFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIHCLEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKPTVKSFVLDCEIVAYDREKKKILPFQILSTRARKGVTISDIKVSVCTFGFDILYINGKPLLQEQLKVRREHLYNSFEEVPGVFQLATSITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGDSLDLVPIAAFHGRGKRTGVYGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSVSLRTKAIPKPKAYYRFADTMDPDVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRFPRLLRVRDDKNPEQATTSEQVADMYRAQKIYHANNNNDDEDDD</aaseq>

Gene Sequence

<dnaseqindica>1..297#391..507#733..834#919..1032#1576..1806#1888..1982#2346..2433#2649..2780#3099..3211#3627..3728#3920..3981#4095..4166#4241..4314#4422..4478#5011..5088#5175..5252#5337..5408#ATGGCTGCTGCTTATTGGAGCCCCGAGGAGCCCGTGCCGTTCCTGTTCCTCGCTCGAGCACTTGACCTCATCTCTAATGAGTCTGGAAGGATTGTTATCACGGAGATCCTATCGAATGTCTTCCGCACGGTGATTGCCACAACACCAGAGGATCTCCTCGCGACAGTATACCTCTCAGCCAACCGGATTGCGCCGCCTCATGAAGGGACTGAACTTGGAATTGGGGATGCATCAATTATCCGTGCACTTGCGGAGGCATACGGCCGCAGAGAGGAGCATGTCAAGAAGAACCTAAAGGTAATTAAATTGGGGACAATGTAGGTTCAATCAATGAGCAAGCATTATGAAGCTGAAGTCCTAACTTGAACATGTTTCTGTTGGCCATTGTAGGAGTTGGGCGATTTGGGGCTTGTTGCAAAAGCAAGCAGGTTGTCACAGAAGATGATGTACAAACCGAAACCACTGACGATCTCACATGTACTTGCAAAATTCCGGACAATTGCAAAGGTTTTATTCCTCTCATTTCTCATTACCCATTATTCGGACTGATATTGTCAACATGAACTGAACATTCTTGTCTTGATGGTGCCGAGATGATTGATTGTCAGAAGTAAATCCACACTGAGTAGTAAGCAATGGGATTAGAGGGAGGGTACTCTAGTTGCAGAATGCACTACTATGCATTGTCATTTCAGAGATCATTTAGCAACCATACTTTTTTTTTTTCATCAGGAATCAGGCAAAGATAGTCAAGATAAGAAAAGAAATCATATCAAAGGACTTCTCGTTGCCGCAACTGACTGTGAACCTCAATACATTACACGACTACTTCAGGTAACTCATTTTAATGTGCCTGGTGTCCATGAATATACTGTAGTCTTTGCCTTTGCCTGAAGCATCAACTGTTACTTGTTACAGTCGAAGATGAGGATTGGGTTAGCAGAAAAAACCGTCCAGATGGCTCTTGGGCAAGCTGCTGTGTATTCTGAAAAACATTCTCCACCGTCAAAAATCCAATCCCCTTTTGAAGAGGTTGGCGCACATTTCTTCTATTTAAAGTTTTACCGTAATGTTTGATTAATGTGGATAAGTTTCAAAATACTTGCATTGTCTGCGCAATAGTAATGTTTGATTTGAGTGGATGGATTTCCAAATGCTTGGGTTATCTACAGATAAATGCACATGATTCAAGAGGTTTTCAGTTTGCATTCAACATAGTTCTAATTTGTTGATCCCTGCTATTCCTACTGAAAGTTTGGCCTTAGAAAATTTGATACGGTTGCTAGCTCAGGAATTGTAATGGCACTATTTTCTTGAGTGCTAGCAATCCTTCTGTAGCCACTGCATCTAGTTAATCTTGGTGGTGCATCTAATCTACATTGGAACTTATGTGAGTTGCAATTTTGCGTTATGCTCTTGAGAGTGCTCCTGCTAGCACCTGTGTGGAGGATTATTAATGTGGTTTGCTTGTTCAATACCATCGTATTTTGTTTCTGGCATCATATTGAAAGCTGTGCATGAATACCAACAATTATGATATGTTCTGATGCTTATTTTAAACTTTGTTTTTTGAAGGCTGCAAAAATAATTAAACAAGTATATTCAGTTCTTCCAATATACGATAAAATTGTCCCAGCTATTCTAGAAGTTGGTGTTTGGAAACTTCCAGAGATATGCAGTTTTTCTATTGGTGTTCCTGTTGGTCCTATGTTGGCAAAAGCAACAAAGTCTGTCTCAGAGATCATAGACAAATTTCAGGGTCTTGAGTACACTTGTGAGTACAAGTATGATGGTGAACGGGCTCAGGTACGAACAAGCCCATGATCGGTTAGCTTTTCTTATATTCTTAATTTATGATCCAGTAACACTTGATACTTTGGAATGAAGATACATTGCCTGGAAGATGGATCAGTAGAGATCTATAGTCGTAATGCTGAGAGGAACACTGGGAAGTATCCTGATGTTGTTGATGCGGTTTCTAGGTATACTGTCCTATTTTTTTGCCACTATCGTGATCTCAGATTTGGCGGTCCACTCATTGTTTCCCTCTTTTTAAGGCCTTTGATGCTAAGTTTACCTTACACTGCAACAGTTGTCGACCACCAATAGTTCAAATTCTACATGTACAGTTTGGTCAACTTGTTATTTATTAGGTGCTTTGCTAGATTTGTTTATTACTTTATTAAATTTAAAACCCCCTTCTCTTTACTTTATCATGTTACGTCCACATGTACTAACACTGTTAAGCCAAACCCGTATAAGCTATTTAACTTGCCCATCTATTGTTCATTTGCTCTTGCACATCTAGTTCCAAACAAATATTATCCTGTTGCATCTAAATGCAGATTCCGGAAGCCTACAGTCAAATCATTTGTCTTGGACTGTGAAATTGTTGCTTATGACCGTGAAAAGAAGAAAATATTACCTTTTCAGGTTTGTATTTCGTCCCAAACAAGATTTTTGTTTGGTTCATAATGACCACCAATATAAATATGATTATACAACACCAAGCAGTTCAGCTAGAATTTTTATCTGTTTCACATTAGTAAATTTTTGTTTGTTTTATCGCCCTTGTTTTCTTAGCTGATTTTTATGTATCTGTTAACACTAGCTCTGAGGATCCAGTGATTGATTCTTCTTTCTTGCAGATACTTAGCACACGGGCCCGCAAGGGTGTTACCATAAGTGATATCAAAGTGTCAGTCTGTACTTTTGGCTTTGATATTCTTTACATCAATGGCAAGCCTCTTCTCCAGGAACAACTGAAAGTTCGACGAGAGGTATTGTTTTTTCTGTACTGTTATGAGCTGCATTGTTTAAGTTCATCTATCCATTGCTATCCCATAGGGCACGTTTTAACAAAGCCATGGCTGCAGTTTTTTTACAGACTATATCTGAGTCAGAATCACTTATTTGTTCAGCCGTGCCTGTTGTTACATTTATCGCATGTGCTGCATATGTTTTCATGAAAAAAAGGATCTGTTGAAGTCTATTTCATAGCTGATACACATGAAGTGTTATTTCCTCAAATCCAACAAAATAAACCTAATTCAGTCAAATGTTTCTGGAGATATTCCATTGACACTGAATGCTTGCAGCATCTTTACAACTCCTTTGAGGAAGTACCAGGTGTTTTTCAATTGGCAACTTCAATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTCGACACAGCTGTCAACTCCAGGTAAATGGAATTTCAGTAGCAGTTGGTTTAATTTGGGCCAACTTATCATACCTGTTTCTAGTTTGGTCTGCCACCTTGCTTGTTCTAGAAAATTCAACGGAAGTTCAATCGTTCTCTGCAGAATTATTTATAGCAGATACTGCTCAATTTCAACTTTGTCTTATTGTTAAGTTGATTTCTATTGAATTCTTGTGAAAGGACACCTTACAAACTATTAGCCCGCCTAGGATGCATATATCTGTGAAAATAAGATGTCAAATTAAACCATGCAAAATGTAGCATTATCATGACTTTAGGACTCCAGTGAAGGAATAAAAACATTTTAGGCAGGGATTTTTAATGATTTTTGGGTGTTGCAAGTTTGCAATTAGACTATTGGAGTTTTGTCCTGCAACTAAGATCAATCGCTGTGCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGGTCAGATTTCATGCTGTGCCAGATTTTACTCATCTTTGATTACACAACAGATTAGATCTAGTAAATTGATGTGGGCTAGATAAAAAAATCATGTGTTTATCCTATATGTTACGGTCCAACCATTATAGTTTTTTGTGTACCATTTACTCGGCATAGGATCATTTAATTGTTTTTTTTTTCTTGGGGAGCAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTATGCTTTCTTCCATCATACGTACTGAACATAAAAATGAGTTAAACAAAGTAATGTGTATATGGATCATTCCTCATGGATTTATCTGTGTCCGTTTGGCTCGTGCTTACTAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGTATGTTGGTTTTTTAACCTTATCCTGTTAGTATGATGATTTGATTCATGTTTTATATCTTGATCCACATTTAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGGTGGTGCATCCCTTCAGCCTGCTATTGCATGATTATTCTCTTTTTATCTTTTATTCATTGTCTTGTCCTGTTGTTCTGTTCTACAGTTGTGCTTTCATTTTTTTTAGGCATACTATAGGTTTGCTGACACAATGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTAATGCCCACCTTAAACTTTTGACTACCGACTGTTTCTTAGTTGTACTCGTACTTCTTGTTAGGGGCTTTTGCCATCACTCACTGCTGATCTGGAACTCTTGATTTGATTGACCTGGGTTTGTCCCATTCTTCTCAAATCTGAACTCAGTTTATGATATGAATTTCTACTTATTCAACACCGATGCTTTATGTTTTACCCCTATATATTCTACATTTTTTTTGTTGATGTTACATTCCACTGTTTTTGAATTTCATATCTTCCAAATGAACTATTGTTTGATCTCTAGATTTTCTATACGTGTACCATAGCACCTTACTACATATGGAATTGACCGAATTGTTTTGGGAATTTTCTAGAACTTCTAAGCATATTTTTGTGTAGTGTTTTACATGGTTTTATTGAATTTGCTGTTTTACTTCTTACTTCCCCGGATATATTTTGACCCTAAAGTTTAAATTAAGGGGTCTAGGCAGCTTTGATTTAATTTTCTGATTGTTGAGGTTTGCAATTATATTTTGTTGATCCTCAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGTTGGTTTTGCTATCCGCCGTAATCCCGTTCTGTAGTATATATGCATAAGTGCATGATTTTGATACTAATAGCCAAATTGAACCAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATCTGAGCAAGTAAGTTTCTCCCGCTTGTTTCTTTCTTTATGGCACGATCTTAAGATTTCTCATGCATGACTACTACTATGTTCAAATTCCCAGGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031653