BGIOSGA031696

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Revision as of 04:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031696| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031696, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA031696

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031696, complete gene.

LocusTag

OSJNBB0044B19.17

Ensembl Transcript ID

BGIOSGA031696-TA

Ensembl Protein ID

BGIOSGA031696-PA

Length

6471

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16458920..16465390

Sequence Coding Region

16465169..16465390,16464755..16465048,16459281..16460687,16458920..16459129

Genome Context

<gbrowseImage1> name=IndicaChromosome10:16458920..16465390 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:16458920..16465390 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCACCCGCTGCTGAGGGGAGGGGCGAGGCGGGGGAGGAAGTACGCGCACGGGATGCACCCCGCGCAGATGGAGGCGCTGCGCGCCATGTGCGGCGCGCTCATCCCGTCGCTGCCCGTGGACGCGGACGGCGGCGAAGGCGGGCGCCGCCCCGGCGACAAGGACCTCGAGCGGTTCTACCTCGCCTCCGCCGCCGACTCCTCCATCCCCGACGAGGTGGCGGAGCTGCTGGTGACGCGTTGCATATGGGAGGCGGTGGCGCTGACGTGGGTGGTGCTGTGGGCGCTGAGCACGCGGGCGGGCACGCTGCTGCTGTGCGGCCGGGACAGCGTCGCCGCCGTCGACGGCGGCGGGTTCCCGTTCGTGTCCGTGCGCCGCTTCGCCGACATGCCGGCGGCGAGGCGGGAGGCGGCGCTGCGGCGGTGGAGCGGCGCGCGGTGGCTCTTCTTCCCGCTCCGCATCGCCTTCGCCATCGCCAAGATCCTCTGCCACTACGTCTTCTACTCCATGGTGAACGAGAACTCGGAGAATCCATACTGGAAAGCAATAGGATACAGAGTGGAAGAGCCCCGACGTGATCGAGCAGAGTCGATGCCGTCGCCGTCGCCATCGCCGGCATCGCGGCGGCCACTGGACAACGGCGTCGTGGAGACGAGGGCGCTGACGGACACCACCCTCCTCCGGTCGCTCGCGGCGAAGGGCCTCTCCGTGAGGCCCGGCGCGTCGGACGAGCACCACACGGTGCGGTGCGACGCCGTCATCGTCGGCTCCGGCTGCGGCGGCGGCGTGGCCGCCGCGGTGCTCGCGTCCGCCGGGTACAAGGTGGTCGTCGTCGAGAAGGGCGACTACTTCACCAAGGAGGATTACAGCTCGATCGAGGGCCCGTCCATGGAGCGCCTCTTCGAGAGGGGCGGCGTCTTCTGCACGTCCAACGTCACGACGATGATATTCACCGGCGCGACGGTCGGCGGCGGGTCGGCGGTGAACTGGTCGGCGAGCATCCGCACGCCGGCGGGCGTGATGCAGGAGTGGTCGCGCGAGCACGGGCTGGCGGTGTTCGCGAGCCCCGGGTACGCGCGGGCCATGGACGCGGTGTGCGAGCGCCTCGGCGTGACCGACGCGTGCCGGGAGGAAGGGTTCCAGAACAAGGTGGTGCGCCGCGGGTGCGACGGGCTCGGGCTGCGCGCCGACGCCGTGCCGCGCAATTCGTCGGAGGGGCACTTCTGCGGCAGCTGCAACTTCGGGTGCCCCACCGGCGACAAGAAGGGCACCGACACGACGTGGCTCGTCGACGCCGTCGAGCGCGGTGCGGTCATCCTGACCGGGTGCAAGGCCGAACACTTCATCGTCGAGAGCAACGGCGGTGGCGGCGGCCGGAGCAAGAGGTGCGTCGGCCTGGTGGCGACGTGCATGAGCAACGGCATCACCAAGAAGCTCCGCGTCGAGGCGAAGGTGTCCATCTCGGCGAGCGGCGCGCTCATGACGCCGCCGCTGCTGCGCAACAGCGGGCTCAAGAACCGCCACATCGGCCGGAACCTGCACCTCCACCCGGTGTCCATGGCGTGGGGCTACTTCCCGGACAACACGCCGGAGCCGCACATCCCGGGGAAGTGCTACGAGGGCGGCATCATCACCAGCATGCACCGCGTCACGGAGCGCACCATCATCGAGACGCCAGCGCTCGGCCCGGGCGCCTTCGCCGCCCTGGTGCCCTGGGAGTCCGGCCGCGACATGAAGGAGCGGATGCGCCGGTACGCGCGCACGGCGCACGCGTTCGCGCTGGTGCGCGACCGCGGCGCCGGGTCCGTCGACGGCGAGGGCCGCGTCCGCTACGCCCCGAGCCGCGACGACGCCGAGGAGCTCCGCGCCGGCCTCCGCCGCGCGCTGCGCATCCTGGTGGCCGCCGGCGCCGCCGAGATGGGGAGCTGCCGGATGGGCGCGAGCCCCCGCGACGGCGCCGTCGACGTCGCCGGCGAGAGCTGGGAGGCGGAGGGGCTCTACGTCTGCGACGGCAGCCTGCTCCCGACGGCGGTGGGCGTGAACCCGATGATCACCATACAGTCCATCGCCTACTGCGTCGCCAAGGGCATAGCCGACTCGATGGCACACGGCAAGGAGCAGCGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAPHPLLRGGARRGRKYAHGMHPAQMEALRAMCGALIPSLPVDADGGEGGRRPGDKDLERFYLASAADSSIPDEVAELLVTRCIWEAVALTWVVLWALSTRAGTLLLCGRDSVAAVDGGGFPFVSVRRFADMPAARREAALRRWSGARWLFFPLRIAFAIAKILCHYVFYSMVNENSENPYWKAIGYRVEEPRRDRAESMPSPSPSPASRRPLDNGVVETRALTDTTLLRSLAAKGLSVRPGASDEHHTVRCDAVIVGSGCGGGVAAAVLASAGYKVVVVEKGDYFTKEDYSSIEGPSMERLFERGGVFCTSNVTTMIFTGATVGGGSAVNWSASIRTPAGVMQEWSREHGLAVFASPGYARAMDAVCERLGVTDACREEGFQNKVVRRGCDGLGLRADAVPRNSSEGHFCGSCNFGCPTGDKKGTDTTWLVDAVERGAVILTGCKAEHFIVESNGGGGGRSKRCVGLVATCMSNGITKKLRVEAKVSISASGALMTPPLLRNSGLKNRHIGRNLHLHPVSMAWGYFPDNTPEPHIPGKCYEGGIITSMHRVTERTIIETPALGPGAFAALVPWESGRDMKERMRRYARTAHAFALVRDRGAGSVDGEGRVRYAPSRDDAEELRAGLRRALRILVAAGAAEMGSCRMGASPRDGAVDVAGESWEAEGLYVCDGSLLPTAVGVNPMITIQSIAYCVAKGIADSMAHGKEQR</aaseq>

Gene Sequence

<dnaseqindica>1..222#343..636#4704..6110#6262..6471#ATGGCGCCGCACCCGCTGCTGAGGGGAGGGGCGAGGCGGGGGAGGAAGTACGCGCACGGGATGCACCCCGCGCAGATGGAGGCGCTGCGCGCCATGTGCGGCGCGCTCATCCCGTCGCTGCCCGTGGACGCGGACGGCGGCGAAGGCGGGCGCCGCCCCGGCGACAAGGACCTCGAGCGGTTCTACCTCGCCTCCGCCGCCGACTCCTCCATCCCCGACGAGGTCGGTCGGTCGGTCGATCGGTCGAACACCCCATGCGCGCGAGTTCTTTCTTGTTTATAATCTCTAATCTGGCGGCGGCCGCGGCGACCGCGGCGCGGCGCGGCGTGGCGTGGCGTGCAGGTGGCGGAGCTGCTGGTGACGCGTTGCATATGGGAGGCGGTGGCGCTGACGTGGGTGGTGCTGTGGGCGCTGAGCACGCGGGCGGGCACGCTGCTGCTGTGCGGCCGGGACAGCGTCGCCGCCGTCGACGGCGGCGGGTTCCCGTTCGTGTCCGTGCGCCGCTTCGCCGACATGCCGGCGGCGAGGCGGGAGGCGGCGCTGCGGCGGTGGAGCGGCGCGCGGTGGCTCTTCTTCCCGCTCCGCATCGCCTTCGCCATCGCCAAGATCCTCTGCCACTACGTCTTCTACTCCATGGTACGTACGTCTCCTCTTCCTCTTCCTCCTCCTCCTCCTCCTCTCGACCGACTCACGAATCAGAATCACCATGCAGCAGCACGGCATCACATACCCCGTGCTTTTCAAATTTCAACCACATAAAAATCTGACAAATCTAAAATTCTGTAAGAAATCGATCAATTATCGTCAAAATTTAGCAGAGATCGAATTTCCATACAAGTATACAACAGTCCTACACCGAAGCACGCAGGTGCACCATGTTAACAAACAACAGCTGGGTTTTTAATTTCGAAATTGGATTTTTTGGCAAGGGGGGACTGGAATTACCGAAATTTCAGAAATATCAGTAATTTCGTTTTTTTGCCAAAATTATTTGAAATTTTGACTATTTTGAATGAATTTGAATAAAATTTGATCAAATTCACAAAAAGTTGCAAAAAACCAAAAAATTCGGACGAGATTTGAGCATGCTGGTGGGGGGTGAAATCACCAAAATTTCAAACCCTGAACAACAGTACAAACACCAGCCTGTCACTCGCAGCAGCTGCACCGTAGACTTCTTGTTCTTGGAGCTACCTAGGAACCGGTTTAGAGAATTTTTTATTTATAATTCGTCTGTTTTCAGCATATGCGTATTCTGCATTTGTTCAAATTCAGATACTCGTATCAGCCTAAATCTCCGTTTGAATCCAATTAAGATGTATACAATCGAGTAACGTCCCCTCCAATTAAGATACATATTTTCTTCGGGCTCTAGAAAATTTACATTCCACGGTCCCAACCTGGATGGATTGGATTACATTCCAGTGGGCACTGGCAACATGACTGGTGAGGCTGTAAAAACAGCACTGAATGGCTGTTTGGTCCTACTGCGTACTGCTACTTGGTCGTGTGTATATATGGTGCAAAAAATGCCGTACTTACTGCCTATTCAGAGGATTAGATGGTTGGAATTAATATGACAGCTCAGTCACTGAGAATGGACCTGCATCAGCAGGAGTGAAGAAAACATCCTCATGCGCCAAGAATTCACACATGACACAACTCTCACACAAATTTAGTAAGAGATATCTCTCTAGTCCGGTTCAAACCTTAGGCTGAACAGTGTTCAGTTCACACTAAAATTTAGTAGAAGTTTGGTTGAAATTGGTGCAATGCGATAGAAAAGTTGTGTGTGTGAAAGGTTTGATGTGATGAAAAGCTGGAAGTTTGAAAAAAAAATTGGAACTAAACAGGGCCTTATTGAGATAGTTAGCATATAAAAAATGAGAAAACCATTAGCACATAATTAATTAATTTTAATTGTTACAAACTTAAAATATAGTTTTATTTAATATTTTAAAGCAACTTATATGTACTAGTGAAAACCAAAATAAAATCAATATTTTAATTAGAAACCATCTGCTGTTTGTTGCCACTGCAGGGCTAAGGTGCGAAATTTGTTTGATTTTCTACCACTAAAACTCACACTCGTTCCATGCTTATCTGTTAATAGAAGAGATTTTCCAGCTTGTTAATAGAAGAGATTTTCCAGCTGTACTCTATCATCTGACTCTCACAGCCTCACAGGCGACGATCACTGGGTTGTCTGCAAACTAATTAAGCCTCTGTTGTCGCCAAAAACTGATTAAGGAGGCGTTTCTTGTCATCTTGTGTATAGTATAGGACAGTGGTTGGGGATTTGTGAATCGACTGAACATTTGGGTGGTTAGACTTTCAGACAATCGCAAATTCACGGGTAGGACATGGCTGTCTTTCTGTCAATCACCCGCGTCCAGGTTTTGAGCTGCTTTTGCTTCAAAAATGTGCGAAATCAAAGTCGATCTTGTCGTGGTGGTGACTAGGTTCATTAGGAAAACCTGAAACGTCTTCTGCTTTTGTGAAAGCACCTCTGCCCCCCCAGTTCAATCAACTCAAACAGGGTACTACTGGTACTAGTGATGTGATCTTCTAACGTGATGGTAACTAGGGTCGGGTTTGTAAGGGCATTCACAGTCCGCGTGCGCGGCATTCGGCCAACCCGTGGCAAACCCAAGATTCCTTGCCAACTTGGCTTGCAGCGTGACCAAAAGAGCTTCGTAGCCAAAATTGGACACACGAACCTCATCAGAAAAGCTGCCATCGACGCGGGGAAGAACGACGCGGCCGCACTGTGCGGGTCGTGGCCTCACGCTTCGTGGCCCCGTGCGACGCTGGAGAGAGCTCCTCGTCGGAGAGGGAACCTCGTTGCTCGTCGTTCTCCTCTCCGCCGCGGGCCTACCATGGAGCTGTCGTCGAGCCGCCGCCACCTTCCCCATTGCCGCCTCGGCAGTCCAGATCCGACGAGCCATGGACTGGATCTGGAGAGCTCGGTGGAGGGAGAGGCCGGAGGCGGGGAGGGGACGCCGGAGGGGGAAGAGCCGACGCCGCGCATGTCCTCAATCCGGAGCTCGTCGTCGATTCGGAGCCGGCGCCGTCGGTGCTCGGGACGCGCCGCCGCCCGGCGCCGTCAGCACTCGAGCGGCCCCTACACCCACTGCCGTTGCCGCGCGAGCCGCCCCGCCGTCGCCGTGCGGGCCGCCCCGCGGCCGTCGTCGCGCGGGCCGCTTCGCCGCCGTCGTCGCGTGGGCCACCCCGCTGCCGCCTGACGCCGCTCGGTCCCGGTCGGTCTCAGAAGAGATGAGATTGTGAGAAGTCGAGAAGTGAGAGGAAGGAGAGAGAAAGGCAGTTGAAAAGTGAGAGAAGAACACTGCTGGGACCCACAATAAAGTAGGATGTACTGTGGAGCAAGTGGCTAGTATTTCTGATGCACTGTGGAGCAAGTGGCTAGTATGCTTCTTTGGTGTGTTTGGGTCTACGTGGCAAGGGGAGGCGCGGCAAATAAGGGGCTCTTTTTGAAACGCATGATTATGAAAATACAAGAATGAGAAAATCAGAGGAATATGATGTCATGCTACAACGAATCCTATAAATCCTACCGAAAATACATTCATAGGATTTTACAAAAAAGTATTGTTTGCTAGCACCATTGAAAAATCAATGGAACTTTGGTGGTGTCTTTTCTTCTGAACATGAAAGATTAAGTTTTTTTTTACATAAAACGATATGATATTAACGTATGATTGATTGAGTTTTAATTATTACAAACTTCAAAAAATAGATTAATATGATATTTTAGAGCAACTTTCATATAAAAAGTTTTCGTACGAAATGCACCATTTAGCAGTTTGAAAAATGTGCCACGAAAATCTTAATGTTAATCCAACTCTTGACGGAAAAAAGAACGGGCCCTTTATGTCACAAGGATGAGGGACCTGATGTTAGTTTTCCTCTAAAATTCCTATGAGCAATTCCGAATTTCAAAGGATTTTAGCGAAGCAAATTTGTATATTCCAAAGGACCATCTAGGAAAAAAAGTTCAATGGATTTGAATCACCCAAAATTTCTTTACTTTTCCTTTGTTCAAACTTCCAACGGAGCCCTTATCTTATTGTTCGAGATGAAGATAATAATACAGAGCAATTTTAAGTTTTGAAGATGATTCTTTTGAAAATTATATTTTGTGAATATTTTTAGTTTTTATCATTAACAATCATAAAAGGAGAGTTAAGTAATGATAGTGGCAAAAACTCTGAAATTGATCAAATATAAAATTCTGAAATTCAAAATCAGCTCCTGATTATAGTCCGTAGCATTGCCAAACATGGTTGGAAGTGCAAGCATGGTAATTTGTGTGATTAAACAAATTTACACACTTCGTTAGTACTCTCTCCATTTCACATTATAAGTCGTCTTGTAGGAGTATTAACTACTCCCTCCGTCCTAAAATATAAGAACTTAAAAGACCATAAGGGATATTAGGAACTTAAAGACTGGAAATGTCCCATCCGGTTCTAGATTCTTATATTTTTGAGACGAAGGGAATAATATCTTATAATGTGAAACAGAGAAAATACTTCTTCCTTAATGAAACAACTGTGCAAACTCTAAATTAATAACAAAAAAAAAGACCGATTAATATCTGAATGAATGATCAAAGAACAAATGTATCTGCAAATCAAACGATCATTTCTGTAACTTGCAAATTTCCTTTGTCCATCATGCAGGTGAACGAGAACTCGGAGAATCCATACTGGAAAGCAATAGGATACAGAGTGGAAGAGCCCCGACGTGATCGAGCAGAGTCGATGCCGTCGCCGTCGCCATCGCCGGCATCGCGGCGGCCACTGGACAACGGCGTCGTGGAGACGAGGGCGCTGACGGACACCACCCTCCTCCGGTCGCTCGCGGCGAAGGGCCTCTCCGTGAGGCCCGGCGCGTCGGACGAGCACCACACGGTGCGGTGCGACGCCGTCATCGTCGGCTCCGGCTGCGGCGGCGGCGTGGCCGCCGCGGTGCTCGCGTCCGCCGGGTACAAGGTGGTCGTCGTCGAGAAGGGCGACTACTTCACCAAGGAGGATTACAGCTCGATCGAGGGCCCGTCCATGGAGCGCCTCTTCGAGAGGGGCGGCGTCTTCTGCACGTCCAACGTCACGACGATGATATTCACCGGCGCGACGGTCGGCGGCGGGTCGGCGGTGAACTGGTCGGCGAGCATCCGCACGCCGGCGGGCGTGATGCAGGAGTGGTCGCGCGAGCACGGGCTGGCGGTGTTCGCGAGCCCCGGGTACGCGCGGGCCATGGACGCGGTGTGCGAGCGCCTCGGCGTGACCGACGCGTGCCGGGAGGAAGGGTTCCAGAACAAGGTGGTGCGCCGCGGGTGCGACGGGCTCGGGCTGCGCGCCGACGCCGTGCCGCGCAATTCGTCGGAGGGGCACTTCTGCGGCAGCTGCAACTTCGGGTGCCCCACCGGCGACAAGAAGGGCACCGACACGACGTGGCTCGTCGACGCCGTCGAGCGCGGTGCGGTCATCCTGACCGGGTGCAAGGCCGAACACTTCATCGTCGAGAGCAACGGCGGTGGCGGCGGCCGGAGCAAGAGGTGCGTCGGCCTGGTGGCGACGTGCATGAGCAACGGCATCACCAAGAAGCTCCGCGTCGAGGCGAAGGTGTCCATCTCGGCGAGCGGCGCGCTCATGACGCCGCCGCTGCTGCGCAACAGCGGGCTCAAGAACCGCCACATCGGCCGGAACCTGCACCTCCACCCGGTGTCCATGGCGTGGGGCTACTTCCCGGACAACACGCCGGAGCCGCACATCCCGGGGAAGTGCTACGAGGGCGGCATCATCACCAGCATGCACCGCGTCACGGAGCGCACCATCATCGAGACGCCAGCGCTCGGCCCGGGCGCCTTCGCCGCCCTGGTGCCCTGGGAGTCCGGCCGCGACATGAAGGAGCGGATGCGCCGGTACGCGCGCACGGCGCACGCGTTCGCGCTGGTGCGCGACCGCGGCGCCGGGTCCGTCGACGGCGAGGGCCGCGTCCGCTACGCCCCGAGCCGCGACGACGCCGAGGAGCTCCGCGCCGGCCTCCGCCGCGCGCTGCGCATCCTGGTGGCCGCCGGCGCCGCCGAGGTGGGCACTGCACCGCAGCGACGGGGCCCGCCTCCGATGCAAGGGCGCACGCGACGCGGACGTGGAGGCGTTCCTCGACGAGGTGACCGTGGAGAAGGGGCCGATGCACTCGACGACGGACAAGTGGTCGGTGCTCTGCTCGGCGCACCAGATGGGGAGCTGCCGGATGGGCGCGAGCCCCCGCGACGGCGCCGTCGACGTCGCCGGCGAGAGCTGGGAGGCGGAGGGGCTCTACGTCTGCGACGGCAGCCTGCTCCCGACGGCGGTGGGCGTGAACCCGATGATCACCATACAGTCCATCGCCTACTGCGTCGCCAAGGGCATAGCCGACTCGATGGCACACGGCAAGGAGCAGCGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031696