BGIOSGA031923

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Revision as of 04:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031923| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031923, complete gene.| tag = OsI_335...")
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Gene Name

BGIOSGA031923

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031923, complete gene.

LocusTag

OsI_33575

Ensembl Transcript ID

BGIOSGA031923-TA

Ensembl Protein ID

BGIOSGA031923-PA

Length

6034

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12834697..12840730

Sequence Coding Region

12840266..12840730,12840056..12840120,12839909..12839989,12839732..12839803,12839175..12839343
,12838682..12838725,12838410..12838509,12838152..12838220,12837510..12837564
,12836315..12836646,12835716..12835809,12835464..12835605,12834697..12834760

Genome Context

<gbrowseImage1> name=IndicaChromosome10:12834697..12840730 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:12834697..12840730 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGGCTCGCGGCGCCTTCGCCGTCCCACTCCGGCGCGACGTCCGGCGGCGGCGCCTCCCACCGCAAGCGGAAGCTCCCGCCGTCGTCCCTCTCCGACGCCACCGCCGACGAGGACGACGACACCACCGCGCCGTCGTCGCCGTCCACCTCCCCGTCGTCGCCCTCACGCCCGTCCTCCCCGTCCTCCTCCCACTCCGACGATGACGACGACGACTCCCTCCACACCTTCACCGCCGCCCGCCTCGACGGCGCGCCCCCGTCCTCATCCGGCCGCCCGCCGAAGCCCGAGTCCTCGACCGTGTCTGCCGCCGCCGCGGCCGCGGCTGCAGCGGCCGCTCCCAAGCCCGATTCCGCTTCCGCTGCCGCCGGCGACGGCAAGGAGGACCCGAAGGGGTTGTTCACTGACAACATTCAGACCAGTGGCGCGTATAGCGCTCGAGAGGAGGGCCTCAAGCGTGAGGAAGAAGCAGGGAGGCTGAAATTTCTATGCTATTCTAATGATGGAGTTGATGAACATATGATTTGGTTGGTAGGCTTGAAGAATATCTTTGCTCGGCAGCTTCCTAACATGCCCAAAGAGTACATTGTCCGTCTTGTTATGGATAGAACTCACAAATCAATGATGGTTATCAGGAATAATATTGTTGTAGGAGGCATTACTTACCGGCCTTATACAAGCCAGAAGTTTGGAGAAATAGCATTTTGTGCAATTACAGCTGATGAGCAAGTTAAAGGCTATGGGACACGGTTAATGAATCACCTGAAGCAACATGCCCGAGATGCTGATGGGCTCACTCATTTCTTAACTTATGCAGATAACAATGCCGTTGGCTATTTTGTAAAGCAGGGTTTCACAAAGGAGATCACATTGGACAAAGAAAGATGGCAAGGGTACATTAAAGACTATGATGGAGGAATATTGATGGAGTGCAGAATTGATCAAAAGTTGCCATATGTTGATCTGGCAACGATGATTAGGCGTCAAAGACAGGCAATTGATGAGAAAATCAGAGAGCTTTCAAACTGCCATATTGTTTATTCTGGAATTGACTTCCAAAAGAAAGAAGCTGGTATTCCAAGAAGAACGATGAAACCAGAAGACATCCAAGGCTTGAGGGAAGCTGGGTGGACGCCAGATCAGTGGGGGCATTCCAAATCAAGATCAGCCTTTTCTCCTGATTACAGTACTTACAGGCAACAACTTACTAATCTAATGCGTTCATTGTTGAAGGCAAGTCTTTTATCTTCGCAAATCTTTTTATATGACATGCAACCATTTGGTTTGACCTCACTGGATAAACCTGTACTTTGCTTGCTCCCTTTTGAATTTTTTGCACCCTTTCTGTTTCAAGCATATTTTCTAAAGCCAGACCAGCTGGATGGTCTGTTCAATGGTTCAATGATTGAAATGGCCACATTTTATAAGTTTAATATTCAAATATTTCTGAATATGAATGAGCATCCTGATGCTTGGCCATTCAAAGAGCCAGTGGATTCACGTGATGTTCCTGACTATTATGACATTATCAAAGATCCTATTGATGTGGAAACAATGTCAAAAAGGGTGGAGTTTGACCAGTATTATGGGACGCTAGAGATGTTTGTACCTGACATGAAGAGAATGTTCAGCAATGCAAAAACTTATAACTCTCCCGATACGATCTATTACAAGTGTGCCTCACGGCTCGAGAGCTTCTTCTCAAACAAAGTAGCATCTCAGCTTGCCCAAGCCTCAACGAAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MDGLAAPSPSHSGATSGGGASHRKRKLPPSSLSDATADEDDDTTAPSSPSTSPSSPSRPSSPSSSHSDDDDDDSLHTFTAARLDGAPPSSSGRPPKPESSTVSAAAAAAAAAAAPKPDSASAAAGDGKEDPKGLFTDNIQTSGAYSAREEGLKREEEAGRLKFLCYSNDGVDEHMIWLVGLKNIFARQLPNMPKEYIVRLVMDRTHKSMMVIRNNIVVGGITYRPYTSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDADGLTHFLTYADNNAVGYFVKQGFTKEITLDKERWQGYIKDYDGGILMECRIDQKLPYVDLATMIRRQRQAIDEKIRELSNCHIVYSGIDFQKKEAGIPRRTMKPEDIQGLREAGWTPDQWGHSKSRSAFSPDYSTYRQQLTNLMRSLLKASLLSSQIFLYDMQPFGLTSLDKPVLCLLPFEFFAPFLFQAYFLKPDQLDGLFNGSMIEMATFYKFNIQIFLNMNEHPDAWPFKEPVDSRDVPDYYDIIKDPIDVETMSKRVEFDQYYGTLEMFVPDMKRMFSNAKTYNSPDTIYYKCASRLESFFSNKVASQLAQASTKN</aaseq>

Gene Sequence

<dnaseqindica>1..465#611..675#742..822#928..999#1388..1556#2006..2049#2222..2321#2511..2579#3167..3221#4085..4416#4922..5015#5126..5267#5971..6034#ATGGACGGGCTCGCGGCGCCTTCGCCGTCCCACTCCGGCGCGACGTCCGGCGGCGGCGCCTCCCACCGCAAGCGGAAGCTCCCGCCGTCGTCCCTCTCCGACGCCACCGCCGACGAGGACGACGACACCACCGCGCCGTCGTCGCCGTCCACCTCCCCGTCGTCGCCCTCACGCCCGTCCTCCCCGTCCTCCTCCCACTCCGACGATGACGACGACGACTCCCTCCACACCTTCACCGCCGCCCGCCTCGACGGCGCGCCCCCGTCCTCATCCGGCCGCCCGCCGAAGCCCGAGTCCTCGACCGTGTCTGCCGCCGCCGCGGCCGCGGCTGCAGCGGCCGCTCCCAAGCCCGATTCCGCTTCCGCTGCCGCCGGCGACGGCAAGGAGGACCCGAAGGGGTTGTTCACTGACAACATTCAGACCAGTGGCGCGTATAGCGCTCGAGAGGAGGGCCTCAAGCGTGAGGTGAAGTATTTGGTTTGCACTGTTTCGATTTGATAGGCCGTTTGTAGGGTTTAGACATCGGAGCAGTCAAATTGGAGTAGCATTTCGTACTGTTTCTTGAATTTTAGAATGTGACTTCTGCTAAAATTGGTGGATTGTTCTGCAGGAAGAAGCAGGGAGGCTGAAATTTCTATGCTATTCTAATGATGGAGTTGATGAACATATGATTTGGTTTGTATGCTAAAATTATTGTTCCAAACAACCTCAGATTTGTTAGTGACTGATGTTTTTCCCCAGGTTGGTAGGCTTGAAGAATATCTTTGCTCGGCAGCTTCCTAACATGCCCAAAGAGTACATTGTCCGTCTTGTTATGGATAGGTAATTCTCAGTGTAATGTGCCTACTACGTATTTTGGAAGCAGAGGACAAGAATATCTCTCTTCGTTAGTGCTTATAAAAGAAATTATTGTGATGTGTCTTGCAGAACTCACAAATCAATGATGGTTATCAGGAATAATATTGTTGTAGGAGGCATTACTTACCGGCCTTATACAAGGTAATATTTCCACCTTGGTGCTAGAACTTGTATGATGTATTGACATCTGTTATATGTATTTGCACTTGCATGAATGATCAAGTTGTGGTACTTTTTTGTTTAGATATCTGATAGTTATTGATAATGAAATCTAATGGAAGCTATGAGCTGTTCTTTTAAGTTTTTGTAGCTAACGTTGATTTTTGATAATGAGATTGTGTTATAGGATTCTACTATTTATTGTTCAGTGATCTCAAAGCAGTAAAGGTTATGTTGTAGGACAGCATGCACACTTCTGTTTGTCTGGCAATTGATTATTTCTGTTGCGTCATGCCATGCACCATGCCAGAGATGTTCCTTTTCTGCTGCAGCATAAGCTTCTGTCCTAATATAGGTTTTGAAATTGTAGCCAGAAGTTTGGAGAAATAGCATTTTGTGCAATTACAGCTGATGAGCAAGTTAAAGGCTATGGGACACGGTTAATGAATCACCTGAAGCAACATGCCCGAGATGCTGATGGGCTCACTCATTTCTTAACTTATGCAGATAACAATGCCGTTGGCTATTTTGTAAAGCAGGTTTGACTATTTGACTGAACTCTTTTATATGCTTTCTTTCTTAAAATTTCATTGTTTTGTGATTGTTCTCAAGTGGCAGCTACGAAATACACTTGAACCTAACGAAATAGTGACTTCATAGAATTAGCGACAAAAAGAATGTTTCAATGCATGGTTTATAAAGTTATTTCTAAGCATGTTGTGTCCAACATTGTCTAGCAGTCTTTGTAAGATTGTATCAGGTGACTAACTTTGAATCTTTAATAGTTCAACTTATCTCCTAAGTCCTACAGTTTTGTTTCAGCTATAAATTAGTTCCCTTAGGCATATGTTCAGCAACAGTTTCTGTACTTAGTAGTTTCTTGATCATAAGAATTCTTGACGATTTAAACAAAAGAGATCAATTAGCATATGTCTTGCAAACAATAATTTGGTTTATTTTGTTGTCCTTTGCTGCTGGCAATTTGTAGGGTTTCACAAAGGAGATCACATTGGACAAAGAAAGATGGCAAGGGTAAGCAATTTATTGTCAATTATATTGTTTTATCATTTCCTTAAAGTATAAAGTGAGTCAGTAACTCCTAATAAAAGTGTAACAATGATAACACTACTTGTTGTCTGAGAGTATTATTGTATTAGGCTACAGCAGGTTTTTATCTGTTGAACTCAATAGTTGCTGATTCCAGGTACATTAAAGACTATGATGGAGGAATATTGATGGAGTGCAGAATTGATCAAAAGTTGCCATATGTTGATCTGGCAACGATGATTAGGCGTCAAAGACAGGTGACATAAAAGGCTAATTGCTGCTTAAACATAAACTGGAAGCAATATTACTCCTTTTCAGCTGTCCTGACTCCTGAGCACTTGATAACTTTATGTGCAAATCATTAGTCAACTGGGATATTCATATCATTATAAGCCAATTGAAGTTTTCTTTTTGTTTTGGCAACTGACTGTATTTTGACTGAACAGGCAATTGATGAGAAAATCAGAGAGCTTTCAAACTGCCATATTGTTTATTCTGGAATTGACTTCCAAAAGGTTAGTTGTTCCTTCTTATTTTGGAATCTATTTCTGTCAAATATTATCAGTTTGATATGTGCAATAGATGAACCTGCTGTTGGAGAAAAAACTGCTAGTCTTAGGTAAAAAAGGATTGTTTTAGTTGATATCCTTGTCAAACATGCCTTGTCTCTATTATATGTTAGACTTCAATTCAATTTTGTGCCAATGAATCCATTGCAAAAAGTTTTGGTGTGTCACTTGCACATTTTATTTCTCAAAAATGGAATAACTAATCATGTTAGTAAAATTTGAGGCACACCTTGGTATGATTAACGAGGAATCCATCCAGTGTGCATCTTGTTAGGTAATGGCATCATCTAGGGAAATAAAGGAATTTTTTTTTAAAATTTTACTGGCAACCAGTTCCCGTCACATTTATCTTGTTCATTTTGGGTTTGTACTAGATAGGACAGAAACAAATGGACTATAACTGGTGTAAGTCACATATAATGTATTTTGCATTGTTGTTTCTGACCCTGCTGTACACAATCTTGGTTAACCTTATCGATCAAAACATGGCATTTAACAGGTTTATTCCTGTTATTCTCTTTTTTTATTTGTAGAAAGAAGCTGGTATTCCAAGAAGAACGATGAAACCAGAAGACATCCAAGGCTTGAGTAAGTAAAACACTTCTATATTAACATAAGTTTGGTTATCTTCAATGCTGTTCGCACAGTTCTCTCTTTCTAAATTCTTGAGCCATCTGCTCCAGCTGATCTCATTGAAAGGCGTTGCATTTGCATTAGTGGTAGTTTGTTTTGAAAACACACAGATAACAACCGAATGTGCTAGTAGATGATTGGTTACACTGGACATTCTTTATGGACATGGACAGATGCGTGAGAAGTATGACACGTAGGGCCATGCATGCCATCCAAATATTCTATCAAATTTGTCATCATCCCCCATTCAGGTCCTATTTGGCAGGGCTCTTAACTCCTAAATCTAACTCTAGGAGCAGTGTGTGGAGTGGAGCTGTGGAGTGGCCTGAACCCCGCTCCACCCCTTTACTTCATTTTTTTCAGATCACTCCAGCCCGCTCTGCTCCCTTTTTGGGTGGAGCTGAAACCGTTTGGTTGAGCTCTAGCTCCAGGAGAGGTGGAGCTGGAGCTGTAGCCCTGCCAAACAGGGCCTCAGTCAGGATGCAAGGAGTTGTCCAGAGTGCGATACCATGCATTCTGACATTCATGAGTTCAGTGCACTGCTATCCCATTGGAGTGCTGCGGACTGCGGTGCTGCCTCTCAGCTATCGATGATGATTGCTTCTACCGCATTCCTGTCCTCTCCCAAGGATGTTTTCCTTAGAGCCAATTGTAGAAATGATCATATGGCAACTGGAGATTGTTAAATATACAGAACAGAATTCTAAAATAAGATGTTCATCCATCTGTCTTATTCGACCATATTTGTTTTGCCGCCTTGTTAGGTTTACTGGTTTAGCTATGATGCAAGCCTGATCAGAACAATCAATGTGATGCAGGGGAAGCTGGGTGGACGCCAGATCAGTGGGGGCATTCCAAATCAAGATCAGCCTTTTCTCCTGATTACAGTACTTACAGGCAACAACTTACTAATCTAATGCGTTCATTGTTGAAGGCAAGTCTTTTATCTTCGCAAATCTTTTTATATGACATGCAACCATTTGGTTTGACCTCACTGGATAAACCTGTACTTTGCTTGCTCCCTTTTGAATTTTTTGCACCCTTTCTGTTTCAAGCATATTTTCTAAAGCCAGACCAGCTGGATGGTCTGTTCAATGGTTCAATGATTGAAATGGCCACATTTTATAAGTTTAATATTCAAATATTTCTGGTATACTTCACTGTGAACTCTACTTCATATGGTCAGACATTAGTCATATTTATCCTTTGAAACGTTAAGCTGATTGTCAGGTGAGCCACTAGTGATTCTCAACCATCAGTCCAGTGTGGTTTAGAAATTAGGCAAAACTGGCTACACCAATGTAACACTAAGGATCCATGTCATTACTCAAAACACACCTTAAAGTCATGTGCATATGCTACTATGCTAATGGATTGCAATGGCCACCAGCAAACAAAACTATGGGCAAACAGACCTGATCTTTTAGTGTGTATCGGCAACAAAAGAGTATCTGCCAGCAGATATAGCTAATTTTGTTTTGTGATTGGGAGTTAACATGACAACCAAGTACAGTGCTCTATAGACAATTTTTTCAAAGGATTATGTTCCAAAGATGTTGTAGATCTGCAATGACCTGATGTGTTGGATCTACTGTTGTCTTACGAAAGATACTTCATACTTTTATCAATTCTGATATAAGAGCTTTGTCTTGTAGAATATGAATGAGCATCCTGATGCTTGGCCATTCAAAGAGCCAGTGGATTCACGTGATGTTCCTGACTATTATGACATTATCAAAGATCCTATTGGTATGCTGGAATGATTTAGGGGATTATTTTCCCTTCTTTTCCCAGCTTGGCGAAGCTATGTTTTGTGCCATCTAAGCTATTCAGTTTCTGAACACTAAGCGTGTCCGCAGATGTGGAAACAATGTCAAAAAGGGTGGAGTTTGACCAGTATTATGGGACGCTAGAGATGTTTGTACCTGACATGAAGAGAATGTTCAGCAATGCAAAAACTTATAACTCTCCCGATACGATCTATTACAAGTGTGCCTCACGGTGAGCAATGAACTTCAATCTTGTGTTTGCATATTCATCTACCTGTAAGTCAGGCATCTGTCAATGTTTCTTTGAAAATATTTAGCCTAACCATTAATAGAAACGTGGGTGGTTACATCTCATGTTGGATTTATGTGCACTCAATAATGTCTTTCTATCATAACCAGTAGAAGATTCACCTTGGGGGAAATCTGGCATTAATTATTTATCGTCCGTGTTTGAAACGTAGGCCTTATTTAGTTCCCAATTTTTTTTCCCAAAAACATCACATCAAATCTTTGGATACATGCATGGAGCATTAAATATAGATAAACAAAAAAACTAATTGCACAGTTTGCATGGAAATTGCGAGACGAATCTTTTGAGCCTAATTAGTCCATGATTAGCCATAAGTGCTACAGTAACCCACATGTGCTAATGATGGATTAATTAGGCTTAATAAATTCGTCTCGCTGTTTCCTATCGAGTTATGAAATTAGCTTTTTTCATTCGTGTCCGGAAACCCCTTCCGACATCCGGTCAAACGTCCGATGTGACACCCAAAAATTTTCTTTTCGCGTACTAAACAAGGCCATAGTCACTTGGTTGTCTAACTAAGTGATTGGTTTTGTTCCTTTTTTGCATACTCGAGAGTTCAAAGAAAGTAGCATCTCAGTCACCTGGTTGTCTAATTGATTTGGTTTTATTCCTTCTTTTTGTGCAGGCTCGAGAGCTTCTTCTCAAACAAAGTAGCATCTCAGCTTGCCCAAGCCTCAACGAAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031923