BGIOSGA031943

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Revision as of 04:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031943| Description = Kelch-motif containing protein| Definition = Oryza sativa Indica Group BGIOSGA031943, complete gene.| tag = OS10G0409...")
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Gene Name

BGIOSGA031943

Description

Kelch-motif containing protein

Definition

Oryza sativa Indica Group BGIOSGA031943, complete gene.

LocusTag

OS10G0409900

Ensembl Transcript ID

BGIOSGA031943-TA

Ensembl Protein ID

BGIOSGA031943-PA

Length

6969

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12522251..12529219

Sequence Coding Region

12529145..12529219,12522251..12523501

Genome Context

<gbrowseImage1> name=IndicaChromosome10:12522251..12529219 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:12522251..12529219 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGGCGGCGAGAGCCTCGCAGTCGGCGCCGCCGCCGCCCGGCGCCGGGGTCCGCGTCCGCGCCCCGCTGGTAGAGTCTGTCTCATGCTACTGCAGATTAGATACTGGTCTGAAAACTGTTGTTGATGCTAGAAAGTTTGTTCCTGGAGCAAAGATGTGCATGCAACCTGATGTCAAACCCAACAAGCGCAAATCAAGGGGCTCTCGTAAGGAGAGGAGCCGAACTCAAGCACCACTTTTGCCTGGTCTTCCTGATGACCTTGCTATTGCTTGTCTTATACGGGTTCCTCGAGTGGAACATCCCAATCTTCGGATAGTTTGCAAAAGATGGAACCGTCTCTTATCTGGGAATTACTATTATTCCTTGCGCAAGAGAAACGGGATGGCAGAAGAATGGGTTTATGTCTTTAAAAGGGACCGTGAAGGAAAGATATCCTGGCATGCCTTTGACCCACTGCACCAGCTATGGAAGTCACTTCCACCAGTTCCAGCGGAGTATTCAGAAGCATTAGGCTTTGGCTGTGCTGTTCTGAGTGGTTGCTATCTCTACTTATTTGGCGGTAAGGATCCTCTGAGAGGCTCTATGAGGCGCGTTGTATTTTACAATGCTCGGACAAACAAATGGCACCGAGCCCCAGATATGTTACGGAAACGACACTTTTTTGGTTCTTGTGTCATAAACAATTGCTTGTATGTTGCTGGTGGGGAGTGTGAAGGAATACAAAGGACACTCCCGTCTGCTGAAGTTTATGATCCAAATAGGAACAGATGGGCCTGTGTTGCTGAAATGAACAATGGGATGGTACCTTTCATTGGAGTTGTATATGATGGCAAGTGGTTCTTGAAAGGGCTTGATTCCCATCGCCAAGTGACAAGTGAAGTCTACCTACCATCATCCAATTTGTGGTCAACCATTGATGACGAAATGGTTACCGGCTGGCGGAACCCAAGCATTACCTTCAATGGAAAGCTCTATTCATCTGATTGTCGAGATGGCTGCAAGCTTAGAGTGTATGATCCAAACACAGGAACATGGGCAAAATTCATGGACAGCAAGCACCACCTGGGCAGCTCACGCGCCTTTGAAGCTGCAGCATTGGTGACATTAAATGGGAAGCTTTGCATTGTCCGCAACAACATGAGCATCACCCTTGTTGACATCTCTGACCCAACGATGAGTATTGAGACTGACAGTGCACGCATGTGGGAGACTGTTGCTCGGAAGGGCCAGCACAGGTCGTTCGTGGCAAACCTGTGGTCGACCATCGCAGGACGGAACCTGAAGAGTCACATTATCCATTGTCAGGTTTTGCAGGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MDAAARASQSAPPPPGAGVRVRAPLVESVSCYCRLDTGLKTVVDARKFVPGAKMCMQPDVKPNKRKSRGSRKERSRTQAPLLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLLSGNYYYSLRKRNGMAEEWVYVFKRDREGKISWHAFDPLHQLWKSLPPVPAEYSEALGFGCAVLSGCYLYLFGGKDPLRGSMRRVVFYNARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLPSAEVYDPNRNRWACVAEMNNGMVPFIGVVYDGKWFLKGLDSHRQVTSEVYLPSSNLWSTIDDEMVTGWRNPSITFNGKLYSSDCRDGCKLRVYDPNTGTWAKFMDSKHHLGSSRAFEAAALVTLNGKLCIVRNNMSITLVDISDPTMSIETDSARMWETVARKGQHRSFVANLWSTIAGRNLKSHIIHCQVLQV</aaseq>

Gene Sequence

<dnaseqindica>1..75#5719..6969#ATGGACGCGGCGGCGAGAGCCTCGCAGTCGGCGCCGCCGCCGCCCGGCGCCGGGGTCCGCGTCCGCGCCCCGCTGGTGAGAGCCTGACTTGTCTCTCCTGTTCTTTTGTTTCTATACTAGTTTTTTCTCTCGCTCATAGGCGCGGTTTTTGTGGGGGGCTGGATTTGGGCGTGGTTGCGCCGCGAGGGGTGGAGAGAGGCTTGGGATTTCCGAGCGCGCGCGAGATGCTGGTTTGGGATTTGGGGGTGGGAGGTGGGAGGGTTCGGTGGATTCCGCCGTGGTTGGGCGGTGTGGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCACTGTCACTGATCACTGTACTTATCTATGTTGTATCATGCCCTCTTGGCATACTGCTTAGTGTGCTTAATGTTGGCTCTATGTTGTAGCGGCAGATTAGACTTGAGAGTAGAGAAGTAATAAGCCTATTGGTTACTGTACTTGAAAAATCCGTATGTCCTGGTATCATGTGCTGTAAATCTTCGTAATTACCCCTCCAACTCTCCAAGCATTTCATTGCACCAATCCTGTTTCTCTATTTAATTTAATGTTTAGATGATTTGAGCTGAAATGAAGATACTATGATTGATTGATTTCTATGTGATTGGATCTGATGTGTACTAGAATTTGTAAATGCAAGGATTTCAAATGGACAACAATTGTAGGCATACACTTCTATATATACAAGCAGCAAGCGAAGAAACTATTTATGTCACTCTACACCAATTTGGCATTGGCTTGAAGCTTTACTCCATATTGAGTTTCAAATGTGTCTCCAATGTTCTACTCTTTAGGCCAATTCCTATGTCTGTAAATTTCATAAAATAAACTCTGCATTCAAACTATTGGAAAAAAAAAACAGATTCAACATTCTGCACTTAAATACAAACCAATCATATAAAGTAGGGAAAATTGTAACATTGGGGACTTGATGTTGGTGTAGAAAGGCTCTCACCAGGAGCCTATTTATCTCTGAAGGACTTTGTGTTGGTATTAGGCTTACATATATAGCCCCAAGACACAGGGAATCCGTATGGAAACATAATTCATGACACTACTTGAGAAACTACGATGCCTACCGTTGCTTCGAGCCAACTTCAAGTAGTCAAGTGTAGGGTTGGGAGGCATTTGGAAATCACTTGTGACATTTTTGTCGAACCACACTATCGAGATTTTGATGAGGAGTTTGTTGGTCTACAAGTGTGCAAGCAGCTTGTCTGAAGACAAAAGAGAGTCTAGCTGTAGTGACTAGCTCGCTCCACGCTGCCGTATTCAGTCTTTTTTACACCAAGGTGAAATCACATCTCGTTGTATGTATGTGATTTAAATAGTTACATAAAAATTTCATAAAATTTGGCATGATAGATTGTGATGATATAAGTACCTATGCAAACATGAATGCAAGTCTAAATTCAAACTACACATAAAGGAAAAAACAAATTTTATTTTCAAAAAAACATGAGTTCCCAACTCACCTATGCTCGTACGCTTTTCAAACTACTAAATGGTACGTGTTTTGCAAAAAGTTTTTATTTAACAGTTGTTTTAAAAAATCACATTAATCCATTTTTCAAGTTTTTTTAGCTAATATTAATTAATCATGCGTTAATCTATCGTTCCGTTTTACGTGCAGAGGGGAGGGGTTCCCAAACCCTTCGAAAGAACACATGTACTTCAATCTGGTCAGTTTGTGTAAGGATTGGTCGAGTAGAGCACCGAATTTGAGTAGTGGTTTGTCAGCTCGAGTGAATGTAGTTTCAGCTTGTGAAACATTTAGTAAAATGTTAGTTTGAGGGGTCAAACGGTGCCTGATTGGGCTGATTTTTGGATAGCTTGGAAGGGACTCATAGAAAAACATTTTTTCCATGTTTCGTGTAATTTTCTTCCGTAGTTTGGGAGATATTAGCTGAGAACCGAAGGGGACAGAATCTGCTATTTCTTTACTTGTTTTCGTTATACCTCTTAGTAGTGGTTGTGGTTAATATTGATGATGCTAAGTTTGTAATTTGATGATAGCTGCTGTTGTGATGTGCCTCTAGATGTTCTAAAGAAAACTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGTGGTGCTTGGATCGTCAGCGGTCGTGCCGACGATGGCGTGGAGGACGGCGGCGGTTGTGGCTGGCTACGACGTGGAGGATGGCAGAGGTCGCGGTGGGTAATGGCGCCGAGGACGGCGGCGGGCGACGGTGCCAAGAGCGTGGAGGACGGAGGCTGCGTGAGCGGAGGCAGCGGGTCGTGCCACGTGGAGGATAGCGGCTGCGGCTAGCGGAGGCGGTGGGTGCCTTCTGCGGAGGACGGCGGCTGCGGCGAGCGGAGGGTGGCGGTCGCAGCGAGTGGAGGCCGGCGGCTGCCGTGCTTGAGCTCCTCCCCATGCCTCCTCCTCGTGCTCCTCCCTGATTGCTGTGTGGGGATGGAGGAGATGGGCTGTGTGGGGCCACCATTGGCCAGTCAAATAGAGTGGCTAAATTTGGCTAGTGGAGGGAGGGTTTTAGCTAGTCATATGGCTTAGCCATCCGGTTGGAGAGGCTGTTGGAGCACGTTTTTTTGGCTCGAATGGCTAAAATTTGGCTTGAAGAGTGGGATGGAGAGGCTGTTGGAGATGCTCTTGACATATTAGGCTTGAGAGTAGTAGAAAAGTAAAAAGGCCATTGCTTACTCTACTTAAAAAAATTATATGGCTTGGCATTATCGTGTGCTGGATATCTTCATAATATTTAGCATAAGGATTAAGGAAAACTGGTGTCCATGTAATTAAAGCATCCTCCAATCCTCCAAGTATTCATTGAGTTAAATCATGTTCTTTTATTTAATTAGACAAAGATAGTAAAGTTCTTCCTCTGGACATAAATATTTTACATTTCGGATAGGATTTGGTTAAACTTTTGAAACTTTAACTATTTGGACATGTGGTGTGGCTGTTCATTTTGCACCCTTTGTGTATTCGAATTTGTGAATGAAAGGATTTCAAATGGATAATAATCGTAGGCATACACATCAATTATTTATAACAGGCAACCAACTGCTCTTCATGTTGTACAGTAGCACTCATGCAAGCAGAAAACAAAGAAGCTCTGGACACCGCTACAACTAGCCAGGAAGCCAACGCGGTTGCGAGGCATGCAATGCGCTTTAACTCTCGACGTGGAGCATAGGCAGATGGCCTGCGTTTTTTTTTTTCAGAAAATTTCTATACGAAAATTACTTAAAAAATCATATTAATTTATTTTTAGAAAAAATAAATACTTAATTAATCATATAATAATAGGTGTTTTGTTTTGCGTGCTGGGGAGGAGGAGCCCCTCCCGAACACAGCCTTAGACAGGAGTTTAAAGAAGTAATAAGGCTATTGCTTAATGTACTTTCGAAGTTCGTATGGCTTGGTACGATGTGCTGAAAATCTTCATATCATTGGCCGTGCTTAGTTCCACAGCCAATTCTTTTAAAGTATACGGACACATATTTAAAAGTATTAAATATAGACTAATAACAAAACAAATTATAGATTCCGCCTGTAAACTACGAAACAAATTTATTAAGCCTAATTAATCCATTATTAGCAAATGTTTACAGTAGCATCACATTATCAAATCATGACGTAATTAGGCTCAAAAGATTCATCTCGTAATTTACATGTAAACTGAGCAATTGTTTTTCTCTCCATATTTAAAGCTATATGCATATGTTCAAATATTTGATGTGACAGAATTTTTGAAAGTTTAAAGGGAACTAAACACAGCCATTGTTTGTTTTTGAAACGTCCATGCGTGGAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGTCTTGGGTGGGGGGGGGGGGGGGTGGCTTCTTGGGAGGGTTACCGTGTTGTTGGGATGTGGGGGGAATCGGTGGAAATGAGTCGGAAATCATAGGCAAGTAGTAGATTTGCTGGTGTGGAATTTCATCGCGGTATCAGGTGCTACTCGGGGTTAGGTACTTGTGGTGGTGGTGGTAGTGATCTTAGAGCACTAATCTGTGGCTGGTACAACATGTTAAGATAAGATTCTGCCGGACATCATATATGTTCCTCGCGACCGCGTTTCGTTTTCCCTGGTTATGCATATGGAAAGTTTGCATGAGCAGATGGGCTTCTGCTATGCTCTAAAAGCTCCTTGTATGTGTCCAATCGAGTAGTTAAGTTTCTTCTTTATTTGTTTTGGAATGTATATGCTCAAGTAATGAGATGAACCAATGATTGGCGAGTATCTGTGAGTCTGGAGGATTTTTTTTGTATCTAACCATAATGTAGTTGTATAGCTTGGGCGTCCATTTTGGCCTTGAATTTGGCCAATTGATAATTTGGGCTGGAAAGTTGCAATTGTTCTGGTCAGGTCTTTAACTGTTACACTAACCTCGTCCATACCGTTTCAAGTGTTCACACAGATATCTGCTAACTTAGGTAGGTAGATTAGTTAGTATCTTTAGCTTTCAACTGGTTTCTGGGCACTGACATTATGAACTCAGCTTCGCATTTCCATTACCATTTCTTGACAAACTTAACATGCTTATTGTGCTTAATTTTTTCTTTTGTGTAATGCTTTGTTTGTCATGAGCTGGTTTGTCCTGACTTGTGATTTTCTTAAGCTTAGTCTGTACCATGGTTTTAATCTTAAACTTCGCAGTTAAGAAAAATCTCAGCTTTTGATGTGCAACTACCACTCCTAGTCTTGCTTTGTTGATTTTGTCTGATACATGCCTGTAAATTATGGAGGCTATCCTGCAACCTTTATTTACCCAAATGGGCTAACAGTTAAATCTTATGATGTCACTAATCCACATTAGTTTTTGTTTGGATATTTAAACAGAGATTAGCTTTTGAAAAGAAAAAATGGTTAGAAATCAGCAACATCATGTTGCAGTGTTGATCTTTGTAAAACAAGTTCAATAATCTCTTCAGAGTTTTTTGATGATTATTTTTACTCAGGGTCATGTATCTATACATTTTGATCTATCTGATAACCTAGTGTAACCTGGACTACCAGAGTGGTACTGTCTATTTTTTTTTTCCATATCATATCTTGCATAATAAAATAGGGTCCTGGTGAATTTGAAAAATTGTTGCTGTTTCAGAGCAAATTTGATCTGCATGATATTTGTGGTGCATAAATTATACTCCCTCCATCCCAAAATGATCATCATATATGTTTATGCATCAATACCAATGATAATTTAAATTGCATCAATCAAGACACCATGCTCACATTCTCCCACAATGCATGCATCGATTAAAACACCGTGCCAATTACACCCTAGCACGCACACATTCTCCCATGCTGCATTAATTTGTATTCCGATGAAATCCGTGTCCATACGGTTATATGATGATCAATTTGAGAAATTTTAGATTCCATTATATGATGATCAATTTGGGAACGAGGGAGAATGTTGCATGTGCTGGTAGGACAATTAGGCACACTACTGAGTGAATACGAGCTGTGGTTTTCATGCACTGCAGTTTTTCCTCTTCTAGTACATTGGTTTGCTAATTTATATGCTGTATGGTTGCATTTTTCAGGTAGAGTCTGTCTCATGCTACTGCAGATTAGATACTGGTCTGAAAACTGTTGTTGATGCTAGAAAGTTTGTTCCTGGAGCAAAGATGTGCATGCAACCTGATGTCAAACCCAACAAGCGCAAATCAAGGGGCTCTCGTAAGGAGAGGAGCCGAACTCAAGCACCACTTTTGCCTGGTCTTCCTGATGACCTTGCTATTGCTTGTCTTATACGGGTTCCTCGAGTGGAACATCCCAATCTTCGGATAGTTTGCAAAAGATGGAACCGTCTCTTATCTGGGAATTACTATTATTCCTTGCGCAAGAGAAACGGGATGGCAGAAGAATGGGTTTATGTCTTTAAAAGGGACCGTGAAGGAAAGATATCCTGGCATGCCTTTGACCCACTGCACCAGCTATGGAAGTCACTTCCACCAGTTCCAGCGGAGTATTCAGAAGCATTAGGCTTTGGCTGTGCTGTTCTGAGTGGTTGCTATCTCTACTTATTTGGCGGTAAGGATCCTCTGAGAGGCTCTATGAGGCGCGTTGTATTTTACAATGCTCGGACAAACAAATGGCACCGAGCCCCAGATATGTTACGGAAACGACACTTTTTTGGTTCTTGTGTCATAAACAATTGCTTGTATGTTGCTGGTGGGGAGTGTGAAGGAATACAAAGGACACTCCCGTCTGCTGAAGTTTATGATCCAAATAGGAACAGATGGGCCTGTGTTGCTGAAATGAACAATGGGATGGTACCTTTCATTGGAGTTGTATATGATGGCAAGTGGTTCTTGAAAGGGCTTGATTCCCATCGCCAAGTGACAAGTGAAGTCTACCTACCATCATCCAATTTGTGGTCAACCATTGATGACGAAATGGTTACCGGCTGGCGGAACCCAAGCATTACCTTCAATGGAAAGCTCTATTCATCTGATTGTCGAGATGGCTGCAAGCTTAGAGTGTATGATCCAAACACAGGAACATGGGCAAAATTCATGGACAGCAAGCACCACCTGGGCAGCTCACGCGCCTTTGAAGCTGCAGCATTGGTGACATTAAATGGGAAGCTTTGCATTGTCCGCAACAACATGAGCATCACCCTTGTTGACATCTCTGACCCAACGATGAGTATTGAGACTGACAGTGCACGCATGTGGGAGACTGTTGCTCGGAAGGGCCAGCACAGGTCGTTCGTGGCAAACCTGTGGTCGACCATCGCAGGACGGAACCTGAAGAGTCACATTATCCATTGTCAGGTTTTGCAGGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031943