BGIOSGA031951

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Revision as of 04:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031951| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031951, complete gene.| tag = OsI_335...")
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Gene Name

BGIOSGA031951

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031951, complete gene.

LocusTag

OsI_33517

Ensembl Transcript ID

BGIOSGA031951-TA

Ensembl Protein ID

BGIOSGA031951-PA

Length

4106

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12307396..12311501

Sequence Coding Region

12311484..12311501,12311251..12311349,12310014..12310266,12308725..12308835,12308479..12308615
,12308260..12308373,12307977..12308176,12307692..12307889,12307396..12307558

Genome Context

<gbrowseImage1> name=IndicaChromosome10:12307396..12311501 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:12307396..12311501 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACAACGAGAAGGAGGTGTACAAGCTCTCCATCGGAGCGGCGTGCGCGCTCACGTGGCCACCGGACCGTATCATAATCCAAGTCTTGGATGACTCCACTGATCCTTTCGTTAAAGAATTAGTGGAGCTTGAATGTAAGGAATGGGCCAGCAAGAAAATTAATATCAAGTATGAGGTTAGAAACAACAGGAAGGGATACAAAGCAGGAGCCCTGCGGAAAGGCATGGAGCATACATATGCACAACTGTGTGACTTTGTTGCTATCTTCGATGCAGATTTCGAGCCTGAATCAGACTTCCTCTTAAAAACCATGCCATATCTTTTGCACAATCCAAAGATTGCACTTGTGCAGACACGTTGGGAGTTTGTGAACTACAATGTTTGCCTGATGACAAGGATACAGAAGATGTCACTGGACTACCACTTCAAAGTGGAGCAAGAGTCAGGCTCATTTATGCACGCATTCTTTGGTTTCAACGGTACAGCTGGTGTGTGGCGCGTATCTGCTATTAATCAATCTGGAGGATGGAAAGACCGCACCACTGTGGAAGACATGGATTTGGCTGTAAGGGCAAGCCTAAAGGGATGGGAGTTCTTGTATGTTGGTGATATAAGGGTGAAGAGTGAACTCCCAAGTACCTTCCAGGCCTACCGTCACCAACAACATAGATGGACATGTGGTGCTGCCAATCTTTTCAGAAAAATGGCATGGGAAATTATTACAAACAAGGAGGTATCAATGTGGAAGAAACATCATCTTCTGTACAGTTTTTTCTTCGTACGGAGAGCCATTGCTCCCATCCTGACTTTCTTGTTCTACTGTATTGTCATCCCATTGTCTGCCATGGTTCCTGAAGTCACTATTCCTGTGTGGGGCCTGGTCTATATTCCCACAGCCATTACTATTATGAATGCCATCAGAAATCCAGGGTCAGTCCATCTCATGCCATTCTGGATTCTATTTGAGAATGTCATGGCCATGCACCGTATGCGTGCAGCTCTAAGCGGTTTACTTGAAACTGCACGTGCAAATGATTGGGTAGTTACTGAAAAAGTAGGTGATCAGGTGAAGGATGAGCTTGATGTCCCACTGCTTGAACCATTGAAGCCCACTGAATGTGCTGAAAGGATTTACATTCCTGAGCTCTTGCTTGCGCTCTATCTCCTTATATGTGCATCGTATGATTTCGTTCTTGGAAATCATAAATACTACATCTACATCTACCTCCAAGCTGTTGCATTCACTGTGATGGGGTTTGGCTTTGTTGGAACAAGAACTCCTTGTTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MYNEKEVYKLSIGAACALTWPPDRIIIQVLDDSTDPFVKELVELECKEWASKKINIKYEVRNNRKGYKAGALRKGMEHTYAQLCDFVAIFDADFEPESDFLLKTMPYLLHNPKIALVQTRWEFVNYNVCLMTRIQKMSLDYHFKVEQESGSFMHAFFGFNGTAGVWRVSAINQSGGWKDRTTVEDMDLAVRASLKGWEFLYVGDIRVKSELPSTFQAYRHQQHRWTCGAANLFRKMAWEIITNKEVSMWKKHHLLYSFFFVRRAIAPILTFLFYCIVIPLSAMVPEVTIPVWGLVYIPTAITIMNAIRNPGSVHLMPFWILFENVMAMHRMRAALSGLLETARANDWVVTEKVGDQVKDELDVPLLEPLKPTECAERIYIPELLLALYLLICASYDFVLGNHKYYIYIYLQAVAFTVMGFGFVGTRTPCS</aaseq>

Gene Sequence

<dnaseqindica>1..18#153..251#1236..1488#2667..2777#2887..3023#3129..3242#3326..3525#3613..3810#3944..4106#ATGTACAACGAGAAGGAGGTGAGGTGACCCCGCCCCGCCCGTTCCTGCATTCCGCCCGCCTAGTCCTCTCTCCCCCCGGTGATTCATCGCATTTAATCCTAGAATTGTTGGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCAGGTGTACAAGCTCTCCATCGGAGCGGCGTGCGCGCTCACGTGGCCACCGGACCGTATCATAATCCAAGTCTTGGATGACTCCACTGATCCTTTCGTTAAAGTAAGCCTAGGTTTCAGTGACAAGAGCTTGTCTTGGTTGTCCAAAAAAAGGGGTCAAAATTTGGTTGCTGTCATGCTCATGGGAAATGTAAACTGTTACGTACACTCCAATGTTGGTCAAATCTCCATAAATCAATCATATGGTACTTAAACCCATTTTTCATTTGTTTTTATGGATTAGTACAATCAGTGTCATTTGAATGTAGATAGGTGGCAGAAGCATAGGACGAATGCGCGTCATTCAGTGATTAGTCCGTATAAATTCCAAGTCTTAACGTCATTCGGTGACAAAAAGTTTGTCTTGATTGTCCAAAAAAAAAAGAAACAAATGCCTTGTGTTAACTCCATGCCAAAATTTGGTTGCTGTGATGCTCTTGTGAAATGTTCTGTATATTCGTACAGAACAATGCTTCTCAAATTTCCCTAAGCAAATCATACAGTATTTAACTCGTTATTTCTTTAAGGACTAGAATCAATATCATTCGAATGTAGATAGGTGGCAGAAGCATCGAACTAATGGACTTCCTTCAGTGAATAGTCTATACAAATTCCAAATCTTATTTCCGTGAATTGTTTTTGTTATAGTGTGGATATATGTGATGAAATGAATTTAGGCAACATGGAGACAAAACCATGTCACTGTGATTTATCAAGTAGAATAATTGTTATATGTAGTACTTATGCATTTATGCACCCTTGTTAAAGTACTTGATTTACGAATCTATGAGTTACTTGATTGCCACGTAATACTTTCTTTCTGTTTTGCTTACTTGTTTGGATAGAATCGTTTAGTCACTTGGTCAGTAAGCAAACACAAACTCTTCATGAAACCAACTAATTAGTGCAAAATTGGAAGTGAGGTGATTGACAAACGGAAACTTTAAATATTAATGCATTGTTTTTTTTTCGGTGTGTGTTATTCATTTAGTATTGTCTTGAGATTATTATGCCTTTATATTCTTTTAATTAGTTTTCATTAGTACAGGAATTAGTGGAGCTTGAATGTAAGGAATGGGCCAGCAAGAAAATTAATATCAAGTATGAGGTTAGAAACAACAGGAAGGGATACAAAGCAGGAGCCCTGCGGAAAGGCATGGAGCATACATATGCACAACTGTGTGACTTTGTTGCTATCTTCGATGCAGATTTCGAGCCTGAATCAGACTTCCTCTTAAAAACCATGCCATATCTTTTGCACAATCCAAAGATTGCACTTGTGCAGACACGTTGGGAGTTTGGTAAGCATACTGCTACCATTGTTAGATATTGTTGCTGTACTTTCATTATCATGCAAACGGAATGGAAGAAATGAAGCAGAGAGAATCATGTATTGTCAAAATGACAATCGTCTGTCAAAGTACTAAGTAGTATGGAGCATCAAGAATGAGGAATGGAAAGTGCATTGCCAACTTACTGGTTCCTCTTCATTGTTGCATGCTTAATGTTCAATAGTGAATGTTTCTAACGAAGGCATCTCTTCCTTCAAAAGAGTACAAAAATGCAAGCATATCTAGATGTTCTCAAATTCAGAAATTGTCCGTTAGATGAGGTTTTGATGGATTGGATGTAGAGGGTCTTGAGGTTGTGATCACTCATGACTCATCGTGATTTTTCAATCTAAGTGGTTTCAAAATGTTTATCCATGTGGCACTTAAGCATCTATAAGTCCATTCAAACCTCATCTTCATCCAATGGTCCACATCCGAGTTTGCACATACCCAGGGATGTGTTCCCGTGAGATATTTTTCTTCCTGCCCCAAGAAGTATTAAACATAAGGATTGAGATTCCTAACAAAGTACTGGACTTGCCACAAAATGTAGAGTTGTAGACTACATCTTGACAAAGTATGAGACATTGAGACCCTTGCTCTTAAAATTTTTGAAGCTTATGTTTCTCCTCAAACTGCCATGCTTACTGATATGGGCATTTGTGCTCAAAGTCAGATCAGTGTCTTCAAAGTTTTTTTTTTTTTGACGCAAGTCTTCAAAGTTTTATGATTGTAACTACTTCATAATTGGGATATTGATACCTTCCATAAACAGGACTGCATATGAAGCAACGGTGGTTCAAAATACTAACTCCATCTCACAAATATGCATTATGATATGTATATTTCCTTAGTCCTACAAATAGCTAAACCTAAACAGTATGGTGATTTAAGTAACATTTTGGCTGAGAAACATATAACATGAACAGAGGACTAACAATTTCTACCCACTCTTCAGTAAAGATGCATGATATTATCTAGGTTGACAATTTTAAGCACTAATTTATTTATTCTGATTACTAATGATGTTCCGCTGCAATTTACCCCCTCTCTATGGCAGTGGTAATATCGATAACTTGAAATGAGTAGTTTTGTTTATTCTGATTACAGGATGTTCCTGACCTGGCCTTTGCCGGGTGATTTTGCAGTGAACTACAATGTTTGCCTGATGACAAGGATACAGAAGATGTCACTGGACTACCACTTCAAAGTGGAGCAAGAGTCAGGCTCATTTATGCACGCATTCTTTGGTTTCAACGGTAAGAGCTGTTCTCGACTTCTCGTAGCCATTTACTTGAAGCTTCAATCTTGCTTGATATTTTAGCGTGAAGTGTACATGTACCAAAACAATAGCAACCTTGCCTACAGGTACAGCTGGTGTGTGGCGCGTATCTGCTATTAATCAATCTGGAGGATGGAAAGACCGCACCACTGTGGAAGACATGGATTTGGCTGTAAGGGCAAGCCTAAAGGGATGGGAGTTCTTGTATGTTGGTGATATAAGGGTATGTCTCACACTCCCTCTGAACCTAATATGCTTTTCGATGGGCATATAACTAGCATGTGTTATGCTGTGCCTTGACAGCATTGAAATTATTAATATTACACAGGTGAAGAGTGAACTCCCAAGTACCTTCCAGGCCTACCGTCACCAACAACATAGATGGACATGTGGTGCTGCCAATCTTTTCAGAAAAATGGCATGGGAAATTATTACAAACAAGGTTTGCCTTCTTGAACCTCTCCCCAAAAGACAAAAGTTTGTCTTGTTATCTTGTAACACTATTATCATCTATGTTTGATGTAGGAGGTATCAATGTGGAAGAAACATCATCTTCTGTACAGTTTTTTCTTCGTACGGAGAGCCATTGCTCCCATCCTGACTTTCTTGTTCTACTGTATTGTCATCCCATTGTCTGCCATGGTTCCTGAAGTCACTATTCCTGTGTGGGGCCTGGTCTATATTCCCACAGCCATTACTATTATGAATGCCATCAGAAATCCAGGGTAACGCATGGCTCTTTCCTACTAGTACAGCCTCCTATGTACTTTCTTACTGCCGACTTATCTAGATTATCTTATGCAATATGATAGGTCAGTCCATCTCATGCCATTCTGGATTCTATTTGAGAATGTCATGGCCATGCACCGTATGCGTGCAGCTCTAAGCGGTTTACTTGAAACTGCACGTGCAAATGATTGGGTAGTTACTGAAAAAGTAGGTGATCAGGTGAAGGATGAGCTTGATGTCCCACTGCTTGAACCATTGAAGCCCACTGAATGTGCTGAAAGGTAAGTGTAGCAACCAATAATAAATTTTACATCATCCCTTTTTTCGGGAGCAAAGCACAGTTTACTTTCAATGCTGAAAGAATAAAATACATGTTCAAGAACGTCTCTCAGATTTCAACCTTTGCCTTTGCAGGATTTACATTCCTGAGCTCTTGCTTGCGCTCTATCTCCTTATATGTGCATCGTATGATTTCGTTCTTGGAAATCATAAATACTACATCTACATCTACCTCCAAGCTGTTGCATTCACTGTGATGGGGTTTGGCTTTGTTGGAACAAGAACTCCTTGTTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031951