BGIOSGA031955

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Revision as of 04:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031955| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031955, complete gene.| tag = OS10G04...")
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Gene Name

BGIOSGA031955

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031955, complete gene.

LocusTag

OS10G0405600

Ensembl Transcript ID

BGIOSGA031955-TA

Ensembl Protein ID

BGIOSGA031955-PA

Length

3170

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12251888..12255057

Sequence Coding Region

12254765..12255057,12254601..12254682,12254183..12254256,12253990..12254101,12253746..12253841
,12253559..12253660,12253389..12253463,12253086..12253226,12252840..12252956
,12252654..12252758,12252361..12252441,12252146..12252274,12251888..12252055

Genome Context

<gbrowseImage1> name=IndicaChromosome10:12251888..12255057 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:12251888..12255057 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCTAAAATCACCAGTGGATTTTGCTGGCTCAATCACTTCAGGCCAGAAGGACCCGTGTTGTTTTGGTGTGCCCGGCTGCAATCCGCGATGTGTTAGATACAATAAGAAATCAAGAACATGCCGATTGGTTACTAGAGCCATATCCGTCGATCGCCCGCAGCTAGACTTCTCAAACTCAGACTGGAAGAAGCAGTTCCAGGAGGATTTCGATAGTCGGTTCAGTTTGCCTCACTTGAAAGATGTAATCGACGTTGAACCGAGGCCAACAACGTTTTCCCTCAAGAGCAGGACCCCTCTGGAGAATGTTAATGGTTCTATGCAAGGATCATGGAATGGCTATGTGAATGACGATGACAGAGCACTTTTGAAGGTTATTAAGTTTGCTTCACCAACATCTGCTGGAGCTGATTGCATTGACCCTGATTGCAGCTGGGTCGAACAATGGGTGCACCGTGCTGGCCCACGTAAACAAATATATTTTGAACCTCAGTATGTAAAGGCTGGAATTGTCACCTGTGGTGGACTTTGCCCTGGTCTCAATGATGTCATTCGGCAGATTGTGCTTACACTGGAAAAATATGGAGTGAAAAACATTGTTGGAATACAGCATGGTTTCCGTGGATTTTTTGAGGATCATTTAGCAGAAGTGCCACTTAATAGGCAAGTTGTCCAGAATATCAATCTTGCTGGTGGAAGTTTCTTAGGAGTTTCTCGTGGTGGAGCAAATATCTCAGACATTGTCGACAGCATACAGGCCCGGAGGCTTGACATGCTCTTTGTTCTAGGTGGAAATGGAACTCATGCTGGAGCTAACCTTATACATGAGGAGTGCCGCAAGAGAAAACTGAAAGTATCAATTGTGGGCGTTCCAAAAACCATTGATAATGACATACTACTGATGGACAAGACATTTGGATTTGATACAGCAGTTGAAGCAGCACAGAGAGCTATAAACTCTGCATATATTGAGGCACATTCTGCATTTCATGGCATTGGATTGGTCAAGCTGATGGGAAGAAGCAGTGGCTTTATCACAATGCATGCTTCCCTGTCTAGTGGCCAAGTAGATATCTGCCTGATACCTGAGGTACCGTTCACTCTTGATGGGCCAAATGGAGTTCTTCAACACCTTGAGCACTTGATAGAAACCAAGGGATTTGCTCTGATTTGTGTAGCCGAAGGAGCGGGACAGGAACATCTGCAACAGTCAAACGCAACTGATGCATCAGGGAACATGATCCTTGGTGATATCGGCGTGCACCTTCATCAGAAGATCAAGGCCCATTTCAAGGAAATAGGAGTACATTCTGATGTGAAGTACATTGATCCTACATACATGGTCCGTGCTGTGCGTGCCAATGCATCCGATGCCATCCTATGCACTGTGCTTGGTCAGAATGCTGTTCATGGTGCATTTGCAGGGTTCAGTGGCATCACAACCGGCATATGCAACACGCACAACGTCTACTTGCCAATCTCAGAAGTCATCAAGTCCACAAGGTTCGTCGATCCAAACAGCAGGATGTGGCACCGGTGCTTGACATCAACAGGGCAACCAGACTTCCACTGA</cdnaseq>

Protein Sequence

<aaseq>MALKSPVDFAGSITSGQKDPCCFGVPGCNPRCVRYNKKSRTCRLVTRAISVDRPQLDFSNSDWKKQFQEDFDSRFSLPHLKDVIDVEPRPTTFSLKSRTPLENVNGSMQGSWNGYVNDDDRALLKVIKFASPTSAGADCIDPDCSWVEQWVHRAGPRKQIYFEPQYVKAGIVTCGGLCPGLNDVIRQIVLTLEKYGVKNIVGIQHGFRGFFEDHLAEVPLNRQVVQNINLAGGSFLGVSRGGANISDIVDSIQARRLDMLFVLGGNGTHAGANLIHEECRKRKLKVSIVGVPKTIDNDILLMDKTFGFDTAVEAAQRAINSAYIEAHSAFHGIGLVKLMGRSSGFITMHASLSSGQVDICLIPEVPFTLDGPNGVLQHLEHLIETKGFALICVAEGAGQEHLQQSNATDASGNMILGDIGVHLHQKIKAHFKEIGVHSDVKYIDPTYMVRAVRANASDAILCTVLGQNAVHGAFAGFSGITTGICNTHNVYLPISEVIKSTRFVDPNSRMWHRCLTSTGQPDFH</aaseq>

Gene Sequence

<dnaseqindica>1..293#376..457#802..875#957..1068#1217..1312#1398..1499#1595..1669#1832..1972#2102..2218#2300..2404#2617..2697#2784..2912#3003..3170#ATGGCTCTAAAATCACCAGTGGATTTTGCTGGCTCAATCACTTCAGGCCAGAAGGACCCGTGTTGTTTTGGTGTGCCCGGCTGCAATCCGCGATGTGTTAGATACAATAAGAAATCAAGAACATGCCGATTGGTTACTAGAGCCATATCCGTCGATCGCCCGCAGCTAGACTTCTCAAACTCAGACTGGAAGAAGCAGTTCCAGGAGGATTTCGATAGTCGGTTCAGTTTGCCTCACTTGAAAGATGTAATCGACGTTGAACCGAGGCCAACAACGTTTTCCCTCAAGAGCAGGTGAGAAATACGTTTGAATTTTGAAACGTCTATCTCTCTAGGATTTGTTTTATGTATAACATGATTTCTATGCCTACAACAGGACCCCTCTGGAGAATGTTAATGGTTCTATGCAAGGATCATGGAATGGCTATGTGAATGACGATGACAGAGCACTTTTGAAGGTATGTTTTATTGCTTTGACATTGAGCAATCAGATTTACCTAGACATGGATAAGCTCAAATAGACAAATACTCAATAACAAGTACTTCATTAGACTCTGGTCATGTCAAGATGTGCTCTGGATTTTGTTTTTTCGTTTTCGGAATACAGTGCATGAGCATGGATAACCTGAACTTAGTTTCAATAATTTTTAAATGCAGAATCATATCTAAGCCATGTGGTGGTAGGAATTTTCGTTCGAGTATTATTCCTGCTACTCTAAAGGACATGTTGTAGAACTGCTCGTTGTTTACTTTCTTCTTGATACAATAAGAAGTTCTCATTGCAAATTTGTTCCTTCTTTAGGTTATTAAGTTTGCTTCACCAACATCTGCTGGAGCTGATTGCATTGACCCTGATTGCAGCTGGGTCGAACAATGGTGATAAATATTATCCACAAATTCAAATGTTGAATTGTGACAGTGCTTTTCACTTCTGTAACCAAAAGTTATCTTCTCCAGGGTGCACCGTGCTGGCCCACGTAAACAAATATATTTTGAACCTCAGTATGTAAAGGCTGGAATTGTCACCTGTGGTGGACTTTGCCCTGGTCTCAATGATGTCATTCGGCAGGTAGAACTGTTGAATAGAACAGGACAAGTTGAACTTTGAGACCCGTACAGAAAAATAGAAGTTGACTAACCCATCATATGATTATATTTCTGAGATTCTCTTCAACAAAACCCTAATTGTCAACTTGATCTTGCTTGCACTCTTGTAGATTGTGCTTACACTGGAAAAATATGGAGTGAAAAACATTGTTGGAATACAGCATGGTTTCCGTGGATTTTTTGAGGATCATTTAGCAGAAGTGCCAGTAAGAGACATTAACCAAGTTTCTGGAAAAATAATGATAATCATACCAAAAGTAGTTTAATGGTCTTTTTTTCCCCTTCACTCAGCTTAATAGGCAAGTTGTCCAGAATATCAATCTTGCTGGTGGAAGTTTCTTAGGAGTTTCTCGTGGTGGAGCAAATATCTCAGACATTGTCGACAGCATACAGGCATGAATACATCATTCTACAATTCAAAATATATTTTTACGATGAACTGATGCACAAAAAAACTTATCGATTTGATTTTTACATACCACATTCAGGCCCGGAGGCTTGACATGCTCTTTGTTCTAGGTGGAAATGGAACTCATGCTGGAGCTAACCTTATACATGAGGAGGTATGTTAAATTCCGTGTTCATTGTTTCTGAACAAAAGTTATCTTTTGTTCCTGGATTTTAATAGACAAAAAAAATATCTGACCTCAGTCATATATAGCATGAGTGGATGGCCATCTTACATCTATCTGTCTATTTGCCTCTTTTTCTTTCTTTTGATCTAGTGCCGCAAGAGAAAACTGAAAGTATCAATTGTGGGCGTTCCAAAAACCATTGATAATGACATACTACTGATGGACAAGACATTTGGATTTGATACAGCAGTTGAAGCAGCACAGAGAGCTATAAACTCTGCATATATTGAGGTGATTCATTTCATGAGCCATTCAGAATGAACTTGTCTGACTGAAGAACTATATATATAATATGCACATCATAGTTACCAGTTACCACCAAAACTAGTTTGGTAGCAGTAACAATTTTTTGTGTATTAGGCACATTCTGCATTTCATGGCATTGGATTGGTCAAGCTGATGGGAAGAAGCAGTGGCTTTATCACAATGCATGCTTCCCTGTCTAGTGGCCAAGTAGATATCTGCCTGATACCTGAGGTATGAACTCTTCTGTTGTTATGTATAACCTATGTACTATGCCACTACAGTTGATCAAGCTCATCGGTAATCTATGTGAAGGTACCGTTCACTCTTGATGGGCCAAATGGAGTTCTTCAACACCTTGAGCACTTGATAGAAACCAAGGGATTTGCTCTGATTTGTGTAGCCGAAGGAGCGGGACAGGTAAGGCTAATTCCAGATAGAAAACAAATTGTTTAAAGAAAGATTTTCAGTATGAATGATTCTGCATGTTAGTACCGGGTATCTCTTATATTAGGGGCAAGGTTGTGATATGGAGTATTAGTATACCACATAGATCATTGCTGTAAGCTATCCAGTCTATCATCCACTTTATATATAATAATTATGTAAGAAATGCTGCAATGTATTATCAGGAACATCTGCAACAGTCAAACGCAACTGATGCATCAGGGAACATGATCCTTGGTGATATCGGCGTGCACCTTCATCAGAAGGTTTGTCCATCGAATGACCTTCACCTTGATGATGTATCAAAAATCACATGCCAAACCAAATCTAACTTAACCGTGCCATGCCACAGATCAAGGCCCATTTCAAGGAAATAGGAGTACATTCTGATGTGAAGTACATTGATCCTACATACATGGTCCGTGCTGTGCGTGCCAATGCATCCGATGCCATCCTATGCACTGTGCTTGGTCAGAATGCTGTAAGGCACCTTTCCCTTCATTAGCTTTCTGCCACACAAGTTCTAGCAGTTCATGTTGTCTCAGCATTGATTTCTGATGGAACTTCGCAGGTTCATGGTGCATTTGCAGGGTTCAGTGGCATCACAACCGGCATATGCAACACGCACAACGTCTACTTGCCAATCTCAGAAGTCATCAAGTCCACAAGGTTCGTCGATCCAAACAGCAGGATGTGGCACCGGTGCTTGACATCAACAGGGCAACCAGACTTCCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031955

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA031955&oldid=31177"