BGIOSGA032009

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Revision as of 04:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032009| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032009, complete gene.| tag = OS10G03...")
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Gene Name

BGIOSGA032009

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032009, complete gene.

LocusTag

OS10G0389800

Ensembl Transcript ID

BGIOSGA032009-TA

Ensembl Protein ID

BGIOSGA032009-PA

Length

4888

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11263879..11268766

Sequence Coding Region

11268667..11268766,11267642..11267774,11267478..11267549,11267318..11267392,11267124..11267195
,11266966..11267037,11266758..11266829,11266617..11266682,11266470..11266535
,11266095..11266396,11265715..11266004,11265064..11265335,11264703..11264838
,11264391..11264521,11264123..11264279,11263879..11264022

Genome Context

<gbrowseImage1> name=IndicaChromosome10:11263879..11268766 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:11263879..11268766 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCTGGGCATGGCCGCTCGTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAATCTTGGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCAGCCTCAATTCGCCGGGGCAGCTGCGCGGTTGGCAGGTGAATGGCGGTGACCCATGTGGCGCCTCATGGCAGGGCATCACCTGCTCTGGATCATCAGTCACAGCAATTAAATTGCCGAGCTTGGGGCTTTCGGGGAATCTGGCCTACAATATGAACACCATGGAGTCCCTAGTTGAGCTTGACATGAGCCAAAATAATCTTGGGGGTGGCCAAAATATTCAATACAATCTTCCAAATAAGAAGCTTGAGAGGCTCAATCTTGCTGGGAACCAGTTTGCTGGAAATGTGCCATACTCAATTTCCACAATGCCTAAACTTAAGTATCTAAACCTTAATCATAACCAATTACAAGGAAATATGACAGATGTCTTTTCCAACCTTCCAAGTTTATCAACACTTGATCTCTCCTTCAATTCTCTTACTGGTGATCTCCCACAAAGTTTCACTTCTCTGTCAAGCCTGAAAACTTTGTATCTGCAGAACAACCAATTTACTGGATCAATCAATGTCCTTGCTAATCTTCTCCTGGATAATTTAAATGTGGGAAACAACCGTTTTACTGGTTGGATTCCTAATGAGCTAAAGAAAATAAATAGTCTTCAAACCGATGGCAATTCTTGGAGCACAGGTCCGGCACCACCACCACCACCATTCACAGCACCTCCACCATCACGCAACCGTAAAAAAAGCCCAGGCAGACACTCCAATGGCAGTGGTAGCTCATCAAGTTCTGGTGGAAATTCAGGGTTACGTGCTGGAGCTATAGCAGGAATTATCGTAGCTCTACTGGTCATTGGAGCAGTTGTAGCATTCTTCTTGATAAAGAGAAAACGCAAAGGTACAAGGCAAGAACATGTTGAACAGCGACAGCCTTTCAATTCATACCCTTCCAATGAAGTTAAAGATGTGAAGCCTATACCAGAATCCACCAAGATAGAGGTGGAGCCTTTGCCTTCCCCTGTGGCCGTTAGTCTAAAACCACCTCCTAAGATTGAGCGCAACCAGTCATTTGATGACGATGATGATGACTTTTCAAACAAGCCTGTTGCAAAGAAAAGTAATTCAGCATCAGTAAAAGCAACAGTTTATTCAGTTGCAGACCTACAGATGGCAACAGATAGTTTCAACATGGACAATCTTGTTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAGTGATGGAAAGGTACTAGCTGTCAAGAAACTAAACAGTACTGTGTTGCCAAGCCAATCTTCAGACGATTTCTTTGACTTGGTGTCAAACATTTCAAAGTTGCACCATCCCAATCTCAATGAGCTTGTGGGCTATTGCATGGAGCATGGACAGCACTTGCTAGTTTATGATTTCCACAGAAATGGTTCGCTGCATGATATGCTTCACCTCCCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCTGCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAATGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGATGTTTATAGCTTTGGAGTTGTCATGCTGGAGCTCTTGACAGGCCGCAAACCATTTGACAGCGCTAGACTCCGGACAGAGCAGTCACTTGTCCGGTGGGCAACACCCCAGCTGCATGACATCGATGCGTTGGACCGGATGGTCGACCCAGCGCTCAAGGGCCTGTACCCTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTTGTTCAGAGGGCCAACATGACTAGGAGAATGATCGACGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MAAWAWPLVFLVSCCCSWTQRRILVAATTDANDVTVLNALFTSLNSPGQLRGWQVNGGDPCGASWQGITCSGSSVTAIKLPSLGLSGNLAYNMNTMESLVELDMSQNNLGGGQNIQYNLPNKKLERLNLAGNQFAGNVPYSISTMPKLKYLNLNHNQLQGNMTDVFSNLPSLSTLDLSFNSLTGDLPQSFTSLSSLKTLYLQNNQFTGSINVLANLLLDNLNVGNNRFTGWIPNELKKINSLQTDGNSWSTGPAPPPPPFTAPPPSRNRKKSPGRHSNGSGSSSSSGGNSGLRAGAIAGIIVALLVIGAVVAFFLIKRKRKGTRQEHVEQRQPFNSYPSNEVKDVKPIPESTKIEVEPLPSPVAVSLKPPPKIERNQSFDDDDDDFSNKPVAKKSNSASVKATVYSVADLQMATDSFNMDNLVGEGTFGRVYRAQFSDGKVLAVKKLNSTVLPSQSSDDFFDLVSNISKLHHPNLNELVGYCMEHGQHLLVYDFHRNGSLHDMLHLPDEYSKPLSWNSRVKIALGSARALEYLHEICSPSIIHKNFKSSNILLDTEFNPHVSDAGLASNVPDSEFQASDQGSGYSAPEVDMTGQYTLKSDVYSFGVVMLELLTGRKPFDSARLRTEQSLVRWATPQLHDIDALDRMVDPALKGLYPAKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMTRRMIDGEEGSRRPDDQDQEFV</aaseq>

Gene Sequence

<dnaseqindica>1..100#993..1125#1218..1289#1375..1449#1572..1643#1730..1801#1938..2009#2085..2150#2232..2297#2371..2672#2763..3052#3432..3703#3929..4064#4246..4376#4488..4644#4745..4888#ATGGCGGCCTGGGCATGGCCGCTCGTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAATCTTGGTTGCTGCGACCACTGACGCCAATGATGGTGAGCTGCTGGGGAAAAGGAAAAAAAGAAGAAGAAAATCTCTGTTTGGGTTGGGGTCTCATTGTTTGCTTGCTTGTGCTTGTGCTTTTCTTTTTTGTTTTCTTGCTTTTGAGGTTCTTGATTCCTTTGTTCTGGACCGCCATGGATTTTTGGTCGGGAGAAGGCAAGATTTTGTCTTTGCAGCATTGGGACCATGGGGGGTGTCTTTGCTGGTTCCTGCTTTGAATGCCTGTACCCACATCTTTGGTGGCGTTTGTTTCTGCTGAGCTGGAGATTTTGTGAATGCTTGTTCGTCTCTTTCTTTTGCTGATGTTTATTGCTCTGAGTTGTTAAGCTAAATCTTGTTTTGTTGGATCACATGATGTGGTTTTTCGGTAGATTTGGGAGGAATGAGGATTTTGAGCAGCTTTCTCTTGCCCCAAATCTTTCAGCAGCTGTCAGCACAGTCCAGACACCTTTGCTGGTTGATTTGATCATTGATGGGGATTCTGAGCTAGGGTTTGCATTGGGATCTTTGGGAAACTCTGCATCTATGCACCTGGAGTGTGTTGTTCATTCTGTTTGATGATTGTAGGGGAGAAGTTTTAGTTTCAGGGGAGATAAATGAGTTAATGACCATTGTAGGAGCATTCAATCATTTGTAAAGTATACCAGAACCAACAAAATTGCCCAAGATGGATCCGTGACATCATTGCTCATCCAAAGTAGATTCAGTTTAGTAGCTATTTGCATCTGTGATCCATTTCATTGGTCCTGATATCATGTGAATCTCTAGGTGGGACTGGTCCAGCTTTCCGTTATAAGTAATCATGTATTCATGTTAACTGAAAATTTGTCTGGCGATATTCCACACCTATTGACTTGAAGTAATTCTTTACTTTTTATTATGCAGTTACTGTCCTCAATGCGCTATTCACCAGCCTCAATTCGCCGGGGCAGCTGCGCGGTTGGCAGGTGAATGGCGGTGACCCATGTGGCGCCTCATGGCAGGGCATCACCTGCTCTGGATCATCAGTCACAGCAATGTGGGTAGTGTGGTTGCATAATTCAATGTTCTTGCTTGTGAGCCCAATTTATTGTTTTCTCTGATGTGTTTTTCTCTTCCTGGTTCTACTAGTAAATTGCCGAGCTTGGGGCTTTCGGGGAATCTGGCCTACAATATGAACACCATGGAGTCCCTAGTTGAGCTGTGAGTTTGGATAATGGAATTTTTGGAGTAGTTCTTTCTGTTTGGGAGTTCACTTGGTGATTAACTTGATCATAATTCCATGCAGTGACATGAGCCAAAATAATCTTGGGGGTGGCCAAAATATTCAATACAATCTTCCAAATAAGAAGCTTGAGAGGCTGTAAGTTCCTCAGATGTTGCCATTTTATAATCTATTTTAGGGAAAAAAATTGTACTGACACATACTATCTAATTGTTCTTGGTTATTTATGGCGATAATTTAAGTGAATTTTTTATTTGCAGCAATCTTGCTGGGAACCAGTTTGCTGGAAATGTGCCATACTCAATTTCCACAATGCCTAAACTTAAGTATCTGTGAGTACCTTTTGACCCAAATACAAATTTGCCTTGAAATTCATATTGTACTCTATGGGTTAATTGGATTTTCTTTGTGAATACAGAAACCTTAATCATAACCAATTACAAGGAAATATGACAGATGTCTTTTCCAACCTTCCAAGTTTATCAACACTGTGAGTACTCTTACTTAAAACAAGTATTCTAGGTTGATCTCAATGTGCACACAAAATTCTTCTAACTTCTCTGTTTGCATTTCTTACAAGTCACGATGTATCTTTGCTCTTACTATATTTCTGTACATTGCTACAGTGATCTCTCCTTCAATTCTCTTACTGGTGATCTCCCACAAAGTTTCACTTCTCTGTCAAGCCTGAAAACTTTGTAAGAAGGAACTTTGAATAATATAATAAATTTATAAGTTCTCTTATACCTATAACCTATGTTCTATCTTACCAGGTATCTGCAGAACAACCAATTTACTGGATCAATCAATGTCCTTGCTAATCTTCTCCTGGATAATTTGTAAGCAAATCATTTTGAAGGTATAAATCGGTTATATCACACAATATTGTACTAAGTCCAGTTTTTCCTCCTTTATTGCAGAAATGTGGGAAACAACCGTTTTACTGGTTGGATTCCTAATGAGCTAAAGAAAATAAATAGTCTTCAGTAAGTATTGCTTATGTCTTAGTTCCCTAATGTTTTGGATGGCTGCATCTTGAACTAATGTTATGTTCAACAGAACCGATGGCAATTCTTGGAGCACAGGTCCGGCACCACCACCACCACCATTCACAGCACCTCCACCATCACGCAACCGTAAAAAAAGCCCAGGCAGACACTCCAATGGCAGTGGTAGCTCATCAAGTTCTGGTGGAAATTCAGGGTTACGTGCTGGAGCTATAGCAGGAATTATCGTAGCTCTACTGGTCATTGGAGCAGTTGTAGCATTCTTCTTGATAAAGAGAAAACGCAAAGGTACAAGGCAAGAACATGTTGAACAGCGACAGCCTTTCAATTCATACCCTTCCAATGAAGTTAAAGGTCAGTGTTTGAGTGTTGCAGTGTTTGATATACCATGATCGACACTTTAGTTTTGTAAGTTATAATGTATGCATGGTTCTACAAATGCAGATGTGAAGCCTATACCAGAATCCACCAAGATAGAGGTGGAGCCTTTGCCTTCCCCTGTGGCCGTTAGTCTAAAACCACCTCCTAAGATTGAGCGCAACCAGTCATTTGATGACGATGATGATGACTTTTCAAACAAGCCTGTTGCAAAGAAAAGTAATTCAGCATCAGTAAAAGCAACAGTTTATTCAGTTGCAGACCTACAGATGGCAACAGATAGTTTCAACATGGACAATCTTGTTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAGTGATGGAAAGGTACGCATGATTGCACTTGCCATTTGCTTGAGAGAATAGCAAAAGATATCTTACTGTGCAGTTTTTAAAACTGTGCTGTAAATTTGATTTTAGAGTGACTTTTCCTACATAAATGCACCTAAGCAATCTTAGAGGCAGAAGCAATACATTCATACATGGTTTCCATTTCTTCCTAGCAATAGTGACAAAACTTCATTCATTTATAGTACAATATGTAAATGAAAATATTGAGTTGATTGCTTTCTTACCAATTCAGATTTCCACCATCATATATTTGTTCTGCCTTGGAAGTTACCAAGTGTTTCACACTTGGATATACAAAGACAGTTCATTTCTTCACATGATCAATGTGGCTTACATTTCTCCTTATATGAATCAGGTACTAGCTGTCAAGAAACTAAACAGTACTGTGTTGCCAAGCCAATCTTCAGACGATTTCTTTGACTTGGTGTCAAACATTTCAAAGTTGCACCATCCCAATCTCAATGAGCTTGTGGGCTATTGCATGGAGCATGGACAGCACTTGCTAGTTTATGATTTCCACAGAAATGGTTCGCTGCATGATATGCTTCACCTCCCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCTGCACGGGCACTAGAGTAAGTGAAAACTAAGATCTCTCTCCCTATCTGTTGGATACTTTTCAAATAAATTATTGTCTTTTTTCCAACTTAATGACTTGTGAAAATTGATCTGACTTGCCATTATAATAGAATGGAATGTGATAGGTAAATAACGAGTATATGCACAGATCACTTGTAAATTCTCTTAATTGCATGGAATTCTGTCAACACCTAATCACCTTTCCTGTTAACTTTCTGTAGGTATCTTCATGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAATGTTCCTGATTCTGAATTCCAGGTAAAACTCAAATCATTTTGCTCCAACAAACATATATATTTTCAATTGTAAAGAAATTTATGGTCTTACTTAAAAAAGGAAACTTAAGTTCTGAATGGATTGGTTCTTTTCTTGAGTATCCAAGATGTTACACAACATATGGCTTACCATATTTTTCATGTTTCCAAATAAATCTCAATAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGATGTTTATAGCTTTGGAGTTGTCATGCTGGAGCTCTTGACAGGCCGCAAACCATTTGACAGGTATTCCTATTTTTCTCTGATTCTGCATCCCTGAATTGTTTATGCCTACATTTGATGATTCCTAATTTCTTAGTCCTGACCCCTGACTGTTGTGTCAAACTATCGTCGCAGCGCTAGACTCCGGACAGAGCAGTCACTTGTCCGGTGGGCAACACCCCAGCTGCATGACATCGATGCGTTGGACCGGATGGTCGACCCAGCGCTCAAGGGCCTGTACCCTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGGTATATAACCTTCACTCCTGGTACAATGCAGTTTGCCAGCATATTCATAACTGAACACCAAGAATCTGAATTATACCAACCAAAACCTTCACTATTTCAGCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTTGTTCAGAGGGCCAACATGACTAGGAGAATGATCGACGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032009