BGIOSGA032050

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Revision as of 04:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032050| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032050, complete gene.| tag = OsI_332...")
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Gene Name

BGIOSGA032050

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032050, complete gene.

LocusTag

OsI_33274

Ensembl Transcript ID

BGIOSGA032050-TA

Ensembl Protein ID

BGIOSGA032050-PA

Length

4786

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10019981..10024766

Sequence Coding Region

10024758..10024766,10024370..10024539,10024055..10024210,10023604..10023952,10022869..10023177
,10021456..10021614,10020801..10020970,10020446..10020601,10019981..10020341

Genome Context

<gbrowseImage1> name=IndicaChromosome10:10019981..10024766 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:10019981..10024766 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCATTTGAACACTGGAGCACATACATACTTGAGAACGACTTCAAGTTTATCTCATCAAATGGATTAAATGCTGTAAGAATCCCTGTTGGATGGTGGATCGCCAGTGACCCAAACCCTCCTGCACCCTTTGTTGGCGGATCTCTAGAAGCATTGGATAATGCATTTCGATGGGCAGAGAAGTACAATTTAGGTGTCATTGTGGACTTGCATGCTGCACCTGGATCGCAGAATCCATGGGAACACAGTGGTAGTAGAGATGGTTCACAGACATGGGGCACCACCGATGAAACCATCATCCAAACTGTTCAAGTGATTGATTTCCTTGCATCCAGATATGCCAAAAGCCCAAGTCTCCTGGCAGTTGAACTACTAAACGAACCGTTGGCACCAAAAGTATCAGCTGGAATGCTAAAGAAATACTACCAAGATGCGTACAATGCTGTGCGAAAATATACATCAGATGCATATGTGATCATGTCGAATCCAATTAATGCAGACTACTCGAATGAGATTCTCCAGTTTGCCGGTGGCTTCTTTGGTGCTGTGTTTGATGTGCACTACTATAACATGTTCAATGGATCGTTTGACAACACAACAGCGGAGTGGAATATACAGTTTGTGAGAAATGATCGTTCTGCTGAGCTCAGGAGTGTCACAAAGCAGAACGGGCCTCTCACATATGATGGCACCCAGCTCCAATTCAAATCGGTCACCAACAATATGTACCTTGCCGCTGAGAACGGAGGTGGCAGTGCTATTGTTGCCAACCGGGAGAAAGCGTCTGGTTGGGAGACCTTCAAACTGTGGAGGATCAACGAGACTACATTCAATCTCAGGGTTTTCAACAACCAGTTTGTGAGCATTGGTGGCAATGGGGCAGTTATTGCAACAGCAACCGTGCCGGGGCCGAATGAAACATTTCAGATCATTCGCCTTGACAGCGACAAAAGCAGGATGCGCATAAGGGCACCCAATGGGAAATTCTTGCAGGTGAAGGCCATGGGTTCAGTCACTGCAGATCATGGTGCTAGCACAAATTGGGGAAATGATGACCCATCAGTCTTTGTAGTAAATAATATTTATGGCTTGCAAGGGGAATACCAGATTTGCAATGGCTACAGTGCAGGCAATGCCACAGAGGTGCTCAGGGAGCACTGGAACACATTTATAGTTGAGGATGACTTCAAATTCATCTCATCAAATGGGCTAAATGCAGTGAGGATCCCAGTTGGATGGTGGATCGCCAGCGACCCCAACCCTCCTGCACCTTTTGTTGGTGGATCTCTACAAGCCTTGGATAACGCATTCAAATGGGCAGAGAAGTACAACATAGGTATCATTGTGGACTTGCATGCAGCACCAGGGTCTCAGAATCGGTTGGATCACAGTGCCTCCAGGGATGGCTCATTGGAGTGGGGCACCTCTGCTGCAAACATCGCACAAACTGTGGGTGTCATAGATTTCCTTGCATCCAGATATGCCAAAAGTTCAAGCCTCCTAGCAATAGAATTACTCAACGAACCACTGGCACCAGATGTACCTGTGGATACATTAACAAAATACTATCAAGACGCATACAATGCTGTAAGAAAATACACTTTGCAAGCCTATGTAATCCTGTCAACTCGAATGTCAGGGGATCCAACGGAGTTTCTCTCAGTAGCCAGCAGTCTCTTTGGTGCGGTTATCGATGTGCATTACTATAACCTGTATAACAGCATGTTTGATAACTACACTGTGGAGCAGAACATCAATTTTGTAAGGAATAACCGTTCATCAGATATCAACACGGTCACAAAGCAGAACGTTCCTCTAACATTTGTCGGTAGGTACTAA</cdnaseq>

Protein Sequence

<aaseq>MSFEHWSTYILENDFKFISSNGLNAVRIPVGWWIASDPNPPAPFVGGSLEALDNAFRWAEKYNLGVIVDLHAAPGSQNPWEHSGSRDGSQTWGTTDETIIQTVQVIDFLASRYAKSPSLLAVELLNEPLAPKVSAGMLKKYYQDAYNAVRKYTSDAYVIMSNPINADYSNEILQFAGGFFGAVFDVHYYNMFNGSFDNTTAEWNIQFVRNDRSAELRSVTKQNGPLTYDGTQLQFKSVTNNMYLAAENGGGSAIVANREKASGWETFKLWRINETTFNLRVFNNQFVSIGGNGAVIATATVPGPNETFQIIRLDSDKSRMRIRAPNGKFLQVKAMGSVTADHGASTNWGNDDPSVFVVNNIYGLQGEYQICNGYSAGNATEVLREHWNTFIVEDDFKFISSNGLNAVRIPVGWWIASDPNPPAPFVGGSLQALDNAFKWAEKYNIGIIVDLHAAPGSQNRLDHSASRDGSLEWGTSAANIAQTVGVIDFLASRYAKSSSLLAIELLNEPLAPDVPVDTLTKYYQDAYNAVRKYTLQAYVILSTRMSGDPTEFLSVASSLFGAVIDVHYYNLYNSMFDNYTVEQNINFVRNNRSSDINTVTKQNVPLTFVGRY</aaseq>

Gene Sequence

<dnaseqindica>1..9#228..397#557..712#815..1163#1590..1898#3153..3311#3797..3966#4166..4321#4426..4786#ATGTCATTTGTACGCTCAAAATTAGCAAATTTGAACGATTTGCAAGGGAAAAACCATCTGGCCTAGAAAACTTGCTTCGACTTGCTCAGAATTGAAGTTTATTAGACACCCTTAATTTATGTGTGCAGAACGAAACCTATATGAAATCAGATTATTTTCTTCAAACTAGGAAATACTATGACAATATAACTATTATCCTTGCTCTCAATTTGTTCCTTGTTTTGCAGGAACACTGGAGCACATACATACTTGAGAACGACTTCAAGTTTATCTCATCAAATGGATTAAATGCTGTAAGAATCCCTGTTGGATGGTGGATCGCCAGTGACCCAAACCCTCCTGCACCCTTTGTTGGCGGATCTCTAGAAGCATTGGATAATGCATTTCGATGGGCAGAGTAAGAATATTTACTTTTCCATGTCACCACAGTATAGTAGTTTCTTTTTTTTTTTTAGCAAAACCACCGTAATTTCTTCATCATTAAATAAATTCTCTTAGCTTGGATTGAAAAAAGGATGTCATATACGTAATAAGCGATCTTTGTTGTTGTGCACAGGAAGTACAATTTAGGTGTCATTGTGGACTTGCATGCTGCACCTGGATCGCAGAATCCATGGGAACACAGTGGTAGTAGAGATGGTTCACAGACATGGGGCACCACCGATGAAACCATCATCCAAACTGTTCAAGTGATTGATTTCCTTGCATCCAGGTCTGACAAAGATATCAATAAATAATATTTTCCTTATCATTATCTTAAAACCGGAAAAGAAAAACCAAAGGGATCTCATCTTTCGTCTTAATTGGTCTACAGATATGCCAAAAGCCCAAGTCTCCTGGCAGTTGAACTACTAAACGAACCGTTGGCACCAAAAGTATCAGCTGGAATGCTAAAGAAATACTACCAAGATGCGTACAATGCTGTGCGAAAATATACATCAGATGCATATGTGATCATGTCGAATCCAATTAATGCAGACTACTCGAATGAGATTCTCCAGTTTGCCGGTGGCTTCTTTGGTGCTGTGTTTGATGTGCACTACTATAACATGTTCAATGGATCGTTTGACAACACAACAGCGGAGTGGAATATACAGTTTGTGAGAAATGATCGTTCTGCTGAGCTCAGGAGTGTCACAAAGCAGAACGGGCCTCTCACATATGTAGGTAAGTTGTCGCTCTAACATGTCTGCTGGTGTGCTTTACTCCTCCATTGGATCAACAGCGACAATTATATTCAATCAATTGATCAATAATACAATAGCTAAGTGATTCTCCGTTCCAAAATGTGGTGTTTTACTTTTGTCCTAAGTCAAAGTAATCTAACTTTGATCAAGTTTATAGAAAAAGTGCAAAATAATTACAACATTAAGCTAAGACATATTTCATCGTGCATTTGAATGAAACTAAATTGATGATGTCGTTGTAGATGTTGGTGCATTTCTTCTATAAACTTTACCANAGTTAGAGAAGTTTGATTTAGTACGAAACACCTTAATTACATATGAACAGAGTGAGTAGTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTCTTGGTTAGGATGGCACCCAGCTCCAATTCAAATCGGTCACCAACAATATGTACCTTGCCGCTGAGAACGGAGGTGGCAGTGCTATTGTTGCCAACCGGGAGAAAGCGTCTGGTTGGGAGACCTTCAAACTGTGGAGGATCAACGAGACTACATTCAATCTCAGGGTTTTCAACAACCAGTTTGTGAGCATTGGTGGCAATGGGGCAGTTATTGCAACAGCAACCGTGCCGGGGCCGAATGAAACATTTCAGATCATTCGCCTTGACAGCGACAAAAGCAGGATGCGCATAAGGGCACCCAATGGGAAATTCTTGCAGGTAAGGTTAATTTGCAAAACGAAAAATGCCTTGTCAGTGTGCATCTAGTTGTTACCTGCTACTATCATGTATGCATTCTCTCAATATCTGCGGAACATATGTGATTATTTCAATTTACTGATGAATGTCTATTGATTTAACAATCGTCTAGTTTCAAGGAGTGATTTTTTTTTAATTCAAGTTGTTAGTGTAGTGGTTGTATTATGCTCATGCACCTTTGGTAGAGCTCAGGTGCTAGATTTCTATACTATTAACTAGTTGCGCAGCGGTGGAAATTATTATTATGTTCAAGGACTAGAGCCACCACCTAAGTAATACACACCTTAAATCTAGTGACAGAGCCTACACGCATACAAGATTTTAGGACGCAAACGGTGCAAGGGTGAAAATGTACTTAGTTTGGGAAGTTCTATAGCGACATACTCCCTCTGTCCCATTTTAAGTGCAACCATGATTTTCCGTACCCAACTTTAATCATCCGTCTTATTTGAAAATTTTTTGAAAAAATTTAAAAACATAAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAACAATAAAAATATTAATCATAAAAAACTATAAATAAGACGGACAATCAAAGTTAGATACAAAAACACATGGTTGCACTTAAAATAGGACGGAGGGAGTATTTCTATGGAAATTCTGCAGCCACCTGTTTTTATGGAAATGCTATTAGCCCCATCTTTTCACTTATGTTTATGCTTTTTAACCAAAATTTAAATTTTCAACCTTAAATTTGGAATTGATTTTGGGTTTTTTTTATCAAAGTTTATTTTTCAGCCTTTGCTTTTAGATCGCTAAGAACGCGTATATAAAAGTTTTATTCACAAATTATTTTTCTTTTGCAAATATGTCGTAGCCACCTTTAATTTCCATATGTAACACCATATCTTAAATTCATCTTTTTTTTAAGGGAGATGTCTAAAATTCAGATAAAACAGTCTTCAGGTTAGATTTGTGAAATCTTCAGGTTAGTCGATCTTAAAAAAACTTTTTTTATCATGGTTATCTGGTTTAACCTAACTTAATTTGTTAGTGTTTTTTATTGTGTGTGTCTGGCAACACAGTGTGGCTATTCGAGAACTGCATTTGGTTTGATAAAGCGGGCAAGTTGTGTAGTAGTTATGCAAATCATTTTTTTTAAGGTTTCTTTCAGTCGCACGTACTTCTATTAGATTAACTGCATCGTCAATTGTAAATATATTTCTCCTTTTGAGATGTTAGGTGAAGGCCATGGGTTCAGTCACTGCAGATCATGGTGCTAGCACAAATTGGGGAAATGATGACCCATCAGTCTTTGTAGTAAATAATATTTATGGCTTGCAAGGGGAATACCAGATTTGCAATGGCTACAGTGCAGGCAATGCCACAGAGGTGCTCAGGGTAAGATGTGACACTGTTGTTTCTATTCTATTTTTGTTGAGACACTGAATGGATAACTGTAGGCATACGATGTTTAGATCACTTGTTTTTTCTATCCTTAAAAACCAAAGTGTTATATTTGTATCACTGTTATTATTGGTTCAACAATTCCTTTTGGTTTTGTTCAATAGTAATCTTCAACAATTAATATATGCTGAGTTCCTTCCAATTTTGTACTAGTTAAAGAAATGGTAGAACCTCACTGAATAGAGTTATTGTCTTTCTTATGAAGAAATCTTTCGAAGAAAGAGAAGCTAGCACTTACATAGTTTATTTATGGTATTCATTACTAATTCTAGTTGTCAAATGGGCAAGCCAAAAAACAGAGCAATATGCATATCCTTTTTTGAAATAAATTACTATTGTAGTGTATAAAAATACTCTTCTTCTTGAGACGAAAATATAGTCATAATTGCAGTTCAATATCTAAAGTTCTTTGTTTGCAGGAGCACTGGAACACATTTATAGTTGAGGATGACTTCAAATTCATCTCATCAAATGGGCTAAATGCAGTGAGGATCCCAGTTGGATGGTGGATCGCCAGCGACCCCAACCCTCCTGCACCTTTTGTTGGTGGATCTCTACAAGCCTTGGATAACGCATTCAAATGGGCAGAGTAAGCATATGCACATGTTTCTATTTAAAAATAATGAGAGAAGAAATACCTTGTGCGATTGAGTTTTATAGAGATGGACATAAATATATATTATTCCTTTACAGACTGAAAAGACTATTACATGCTTAAGCTGTTATTGTGATTATTGTGTTTTATTGCAAATGTCATGATATTGCTATATGCCATTTTGTGTGTGTAGGAAGTACAACATAGGTATCATTGTGGACTTGCATGCAGCACCAGGGTCTCAGAATCGGTTGGATCACAGTGCCTCCAGGGATGGCTCATTGGAGTGGGGCACCTCTGCTGCAAACATCGCACAAACTGTGGGTGTCATAGATTTCCTTGCATCCAGGTCAATAATAAAAAATTGGCAAATCAACTGTACTCAGATTATGCTCAATCCATCTAACAGAACTTCTGAAATGTTCTTAACTTATTTTTTTCCTCTGAATGCAGATATGCCAAAAGTTCAAGCCTCCTAGCAATAGAATTACTCAACGAACCACTGGCACCAGATGTACCTGTGGATACATTAACAAAATACTATCAAGACGCATACAATGCTGTAAGAAAATACACTTTGCAAGCCTATGTAATCCTGTCAACTCGAATGTCAGGGGATCCAACGGAGTTTCTCTCAGTAGCCAGCAGTCTCTTTGGTGCGGTTATCGATGTGCATTACTATAACCTGTATAACAGCATGTTTGATAACTACACTGTGGAGCAGAACATCAATTTTGTAAGGAATAACCGTTCATCAGATATCAACACGGTCACAAAGCAGAACGTTCCTCTAACATTTGTCGGTAGGTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032050