BGIOSGA032070

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Revision as of 04:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032070| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032070, complete gene.| tag = OsI_332...")
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Gene Name

BGIOSGA032070

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032070, complete gene.

LocusTag

OsI_33231

Ensembl Transcript ID

BGIOSGA032070-TA

Ensembl Protein ID

BGIOSGA032070-PA

Length

4614

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9551770..9556383

Sequence Coding Region

9555566..9556383,9554023..9554061),complement(9552634..9553795,9551770..9552435

Genome Context

<gbrowseImage1> name=IndicaChromosome10:9551770..9556383 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:9551770..9556383 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCAACACCCATCGTGATCAGTCTACTGACCACGATCATCCCTAAGCTCTACACGTTCATCAGTGGGCAGTACAATCTGGAGGAGACCATCCGGCAAGACATCCGATCCATCAAGAACGAGCTGGACATGATGTTGAGCGCCATCCAAGATTACAGCAGCTTGCTGATGACAACGCGAAGCGGAGATGGCCGTCATCATCATCAGCTGGGAGCAGGAGCTGTGCAGGCGACATGGATCGAGAAAGTGCGCACCCTGGCTCATCAGATGGAGGACTGCATCGACAGCTACATCTACGATCAGATGGCTCCTCATGGCTCCCGGAGGCAAGGCCCTGCTCGGCTTGCATCCGAGGTTAGGGAGCTCAGGAGCAGATCAGCTGAACTGTCCCAGCTAAACCAGCAGTACGGAGCAGCTGTTCTCAGCCGAGAGTACATCACCATCGGTGACAGTGGTGGTGGTAGTACTCTATCCTCTGCCGCACCGTTGTCGACTTTTTCAGATGAGCTCGTTGGCATGGAGGCTCGCCGGAGGGAGCTCCTGGAGCTGGTAAACGGCGAGGGGCAGCCGGAGCAGCAGCGCAAGGTGATCTCCATCGTCGGCTTCGGTGGGCTAGGGAAGACTGTCCTTGCCAATCAAGTGTATTGCGACACTGACGAGCTGAATTTCAGTCCTCGGGCATGGGTTAGCGCGGCAGAGAAGACAGCTGGGGAGGCTCTCATGGAGATATTGCAGAGATTTGAGGTGCGAGTAAGGGACGTGTCTGATGTCGACCAACTCAGCAAGCGTCTCAGGGAACACCTTCGCAACAAAAGTGCATCATATTGTGAGATGTTCAATGCAAGAGCCAACAGGTATCTCATCGTAATTGATGATATGAGGGTAGAACAGTGGTGTAATATGGAGCCTGCTTTCCCAGCCGATCATGGTATCAGCAGCAGAATAGTGGTGACCACAAGTATTCAGTCAATTGCTAATGCATGCAGCATCCCAAAAGGCTACATCTACAAAATGGAAAAACTAGATGCTGAATGCTCCAAAAACCTGTTCTTCAGAAGTGCCTCTATCGAGGAATGCTCACCTGACATGGAGAGAGGTTCAGAATCACTTCGGAAGAAATGTGATGGCCTCCCACTGGCTCTGATCTGCGTAGGCCAGTTCTTGCGCACAGAAGGAGCTCTAACAGGGCAGACATGCAGTGACATCTGCAGCAAACTAGGTTACTATCTGGAGAACAAGGACAACAATGCATTAGCAAGAATGCAAGGGTTGCTTGCCAGGAGCTATGCCTGCCTGCCATGCCATGATGCCAAGGCCTGCTTGTTGTACCTAGGCATGTTTCCCAGCAACTACCCAATTCGGAGGAGAAGATTGTTGATGCGATGGCTGGCTGAAGGGCTTGTCAGAAAACAGCCTCACCCTCGGCTTGGCGACGCTGCGGTCAACAACTTCAGGACGTTCATGGACCGGAACATCGTTCATCCTGTCGGTGTGAGCACCAACGACGAGGTGAAGACATGCCAGCTGCCCGGGATGATGCTCGAGTTCATCTTGCACAGGTCCATATCGGAGGGTTTCATCACACTGGTTTCTGATGAGAATGTGATGCCCAGGTATGCCCCTCGTCGCCTCGCTGTCCAACTTAGCACTGCTGCTGTGAAGGACAGGCTAGGACCAAGAAGTGATCTCTCTCTTGTCCGGTCTCTCATGGTCTCCGGCATAGCATCCCAATGTGTTCTGGATTTCAGCAGGTACAGACTGCTCAAAGTCTTGGATCTGGAACAATGTGACGGATTGACGGATCAACATCTCGAAGGCTTATCCAATTTGTTGTTGCTCAAGTATCTTAGCCTCGGGGGAGAAGTTACCATGCTCCCCAAGAAGATTGAAACACTAAGTTTCTTGGAGACACTTGATGTTAGGAGAGCCAAGGTTGATGTGATGGTGTTCCCAGTCGAAGCAATAGTGCTTCCCAAATTAATTCACCTCTTTGGGAAGTTTAAACTTTTCGGTAAGATTGAAGACGGCGATGACTTGAACGATGCCCGTTCTCTGTCTGTCCATTTCAACGAATGCTCTGAAGACATCATGAATTTTTCCCTGCAAGGAGCCTGCAATCTTTCCACGCTGAAGCTCCAAGGTGACCTGCACCAAATACCTCCATTTGTTCCCTCATTGGTAGCTCTCACAGAGCTATCTCTGACATCGACTACTCTTCGGCAGGAACTCTTAACTAGCTTGACTGAATTGAGATGTCTAGTTTATCTCAAACTTGTCGCGCAAAATCTCGAGGGTTTTGTCATAAAAGTTGGGGCATTCCAAAGCCTGCAACGACTATGCATGGTGGTTCAGAATCCATCATTCCTTGAAATCCAGGATGGAGCTCTGCCACAGCTTGTGTCTCTCCAGCTGATGTATGAAAATTTGGCAAACCTTCCTTTAATCAACATTGGGGGCATCAAGCGTCTTAGGGAAGTGGTGCTTGATTCTGCGGTAAATGGAAGATCACGGAAAAACTGGGAAGACGTAGCGAAGAAGCACGCAAATAGACCCAGAATTTTGTTCATCGAAAGGACGAGAAGGGCCAGATCAGAACATTCTGTTGCACAGGCAGAGAAACCTTCTACACTTCATCGGAATTGGCTACAAAATGGCATACGGAATCTATTTGTAAGAAATTAA</cdnaseq>

Protein Sequence

<aaseq>MDPTPIVISLLTTIIPKLYTFISGQYNLEETIRQDIRSIKNELDMMLSAIQDYSSLLMTTRSGDGRHHHQLGAGAVQATWIEKVRTLAHQMEDCIDSYIYDQMAPHGSRRQGPARLASEVRELRSRSAELSQLNQQYGAAVLSREYITIGDSGGGSTLSSAAPLSTFSDELVGMEARRRELLELVNGEGQPEQQRKVISIVGFGGLGKTVLANQVYCDTDELNFSPRAWVSAAEKTAGEALMEILQRFEVRVRDVSDVDQLSKRLREHLRNKSASYCEMFNARANRYLIVIDDMRVEQWCNMEPAFPADHGISSRIVVTTSIQSIANACSIPKGYIYKMEKLDAECSKNLFFRSASIEECSPDMERGSESLRKKCDGLPLALICVGQFLRTEGALTGQTCSDICSKLGYYLENKDNNALARMQGLLARSYACLPCHDAKACLLYLGMFPSNYPIRRRRLLMRWLAEGLVRKQPHPRLGDAAVNNFRTFMDRNIVHPVGVSTNDEVKTCQLPGMMLEFILHRSISEGFITLVSDENVMPRYAPRRLAVQLSTAAVKDRLGPRSDLSLVRSLMVSGIASQCVLDFSRYRLLKVLDLEQCDGLTDQHLEGLSNLLLLKYLSLGGEVTMLPKKIETLSFLETLDVRRAKVDVMVFPVEAIVLPKLIHLFGKFKLFGKIEDGDDLNDARSLSVHFNECSEDIMNFSLQGACNLSTLKLQGDLHQIPPFVPSLVALTELSLTSTTLRQELLTSLTELRCLVYLKLVAQNLEGFVIKVGAFQSLQRLCMVVQNPSFLEIQDGALPQLVSLQLMYENLANLPLINIGGIKRLREVVLDSAVNGRSRKNWEDVAKKHANRPRILFIERTRRARSEHSVAQAEKPSTLHRNWLQNGIRNLFVRN</aaseq>

Gene Sequence

<dnaseqindica>1..818#2323..2361#2589..3750#3949..4614#ATGGATCCAACACCCATCGTGATCAGTCTACTGACCACGATCATCCCTAAGCTCTACACGTTCATCAGTGGGCAGTACAATCTGGAGGAGACCATCCGGCAAGACATCCGATCCATCAAGAACGAGCTGGACATGATGTTGAGCGCCATCCAAGATTACAGCAGCTTGCTGATGACAACGCGAAGCGGAGATGGCCGTCATCATCATCAGCTGGGAGCAGGAGCTGTGCAGGCGACATGGATCGAGAAAGTGCGCACCCTGGCTCATCAGATGGAGGACTGCATCGACAGCTACATCTACGATCAGATGGCTCCTCATGGCTCCCGGAGGCAAGGCCCTGCTCGGCTTGCATCCGAGGTTAGGGAGCTCAGGAGCAGATCAGCTGAACTGTCCCAGCTAAACCAGCAGTACGGAGCAGCTGTTCTCAGCCGAGAGTACATCACCATCGGTGACAGTGGTGGTGGTAGTACTCTATCCTCTGCCGCACCGTTGTCGACTTTTTCAGATGAGCTCGTTGGCATGGAGGCTCGCCGGAGGGAGCTCCTGGAGCTGGTAAACGGCGAGGGGCAGCCGGAGCAGCAGCGCAAGGTGATCTCCATCGTCGGCTTCGGTGGGCTAGGGAAGACTGTCCTTGCCAATCAAGTGTATTGCGACACTGACGAGCTGAATTTCAGTCCTCGGGCATGGGTTAGCGCGGCAGAGAAGACAGCTGGGGAGGCTCTCATGGAGATATTGCAGAGATTTGAGGTGCGAGTAAGGGACGTGTCTGATGTCGACCAACTCAGCAAGCGTCTCAGGGAACACCTTCGCAACAAAAGGTAAGGCTAATTAATCGGTTTTGCAATTTTGTTGGTCGTTTCGTCATTCACCTAAAACTTGAATAGAGTGTAGACTAAACCTTTTTATAAGGTGTATGATATATAAAAACTGCAGATATTTTTTTATTTTTCTAGACTAATCTAGAATAGTTTTATGCTTATATATTTTTTTAGATAATGTAATGAAACATCCCGGCTGTTACTCAAAGAGCTACAGCCAATTATTACAGAACTCACACAAAAAGTTCACGATAGCAGAAACAAAGCTAAGCAAACATAAACTAATAGACACCAACAGGAGAAAAGGTTTTATGCTTATATAGTGAGGATAAACATCAAAGTGTATTCTCTTCACAGTTTAGTTTAGAACATTTTTTTCACAATAGCGACAAAAAAATATGCATGAGTTATTGCATATTGATTTGGTGTTAAAGAAAAAAGAGCTGTCGGTAGACAAGGAAAAAAATAAATCAGTCACTTCACAAATAAACAGTCCCAATTATTATATACTGCTTCTAGAACAAATAGTGCTCGGGCACTTTATTTACATTAGGCATATGCTCTGTATGAATGTGCACACAATTTTTTTTTCTAGGAATGAAGTTTAAGGCCCCTTTGATTTGTAGGAAAAATGTAGGAATTTTGGAGGATTTCAATCCTATGGAAAAAAAATCCAAACAAAGGATTGAATCATATCCGATCCTTTAAAATTCCTATGGAATGAGTAATCCTATGCACATTTTGAAGGAAAGTTAGCAAGAGGTCTAACCTCTTGGAACATTTCCTCTGATTCTATCTCTCTTATCTGATTCCTGCGTTTTTTTCTGTGGTCCAATCAAACAGACATTCCTGTGTTTTGCAATCCTCTGTGTTTTTCCGATTCAAAGGGGCTCTAACCTGTTAATCTATAGACTAGTTTTTTTTAAGAAGGGTTTTTTTTTTACCCGGCATCTATATCCAACCGGATATATGTAGTCTTTTTAAAATTGGGAACTTAGCCTATCAAATAGGGAACTTAGACCTCAAATAACCCATCCAATCTGAAATTCGCTCCTATGAAGATTGGTTGGATATATGTAGTCTTTTTAAAATTGGGAACTTAGCCTATCAAATAGGGAACTTAGACCTCAAATAACCCATCCAATCTGAAATTCGCTCCTATGAAGATTGGTTGGATATATGTAGTCTTTTTAAAATTGGGAACTTAGCCTATCAAATAGGGAACTTAGACCTCAAATAACCCATCCAATCTGAAATTCGCTCCTATGAAGATTTGAACTCAGGACTTTTTTAAATTAGGAACTTAGCCTATCAAACAGGGAACTTAGCCCTCAAATAACCCAATATGAAATTCGCTCCTATGGAGATTTGAACTCAGGACCTTGTGGTGCTACTCAGGTCACTGCAACTACTAGGCTATATGCCCTTTCACAACCTATAGACTAGTTCAAACAAGTTTGGATTGAACTTGAAACTATCGATGTCTTTCATTTGCCATTTTTAGTGCATCATATTGTGAGATGTTCAATGCAAGAGCCAACAGGTGGGTTTAGGGATGGGGTTAGCTCAGTTTGTCAGAATCTTATTCTAAAATTCCCAAGTTAAGTTCCAGGTTTATATTTAATCAGAAAAGAATGTGATACAAACTAATCAGTTCTAGCTAATCTTTTTGTATTTGAATGTTACCTAAATTCAGAAGTTGTTGTTAGTGCTAAAGCTAAACTCATAGATCAATTTTTCCCCCTCTATGATTGGGAATTATTCTCGCAGGTATCTCATCGTAATTGATGATATGAGGGTAGAACAGTGGTGTAATATGGAGCCTGCTTTCCCAGCCGATCATGGTATCAGCAGCAGAATAGTGGTGACCACAAGTATTCAGTCAATTGCTAATGCATGCAGCATCCCAAAAGGCTACATCTACAAAATGGAAAAACTAGATGCTGAATGCTCCAAAAACCTGTTCTTCAGAAGTGCCTCTATCGAGGAATGCTCACCTGACATGGAGAGAGGTTCAGAATCACTTCGGAAGAAATGTGATGGCCTCCCACTGGCTCTGATCTGCGTAGGCCAGTTCTTGCGCACAGAAGGAGCTCTAACAGGGCAGACATGCAGTGACATCTGCAGCAAACTAGGTTACTATCTGGAGAACAAGGACAACAATGCATTAGCAAGAATGCAAGGGTTGCTTGCCAGGAGCTATGCCTGCCTGCCATGCCATGATGCCAAGGCCTGCTTGTTGTACCTAGGCATGTTTCCCAGCAACTACCCAATTCGGAGGAGAAGATTGTTGATGCGATGGCTGGCTGAAGGGCTTGTCAGAAAACAGCCTCACCCTCGGCTTGGCGACGCTGCGGTCAACAACTTCAGGACGTTCATGGACCGGAACATCGTTCATCCTGTCGGTGTGAGCACCAACGACGAGGTGAAGACATGCCAGCTGCCCGGGATGATGCTCGAGTTCATCTTGCACAGGTCCATATCGGAGGGTTTCATCACACTGGTTTCTGATGAGAATGTGATGCCCAGGTATGCCCCTCGTCGCCTCGCTGTCCAACTTAGCACTGCTGCTGTGAAGGACAGGCTAGGACCAAGAAGTGATCTCTCTCTTGTCCGGTCTCTCATGGTCTCCGGCATAGCATCCCAATGTGTTCTGGATTTCAGCAGGTACAGACTGCTCAAAGTCTTGGATCTGGAACAATGTGACGGATTGACGGATCAACATCTCGAAGGCTTATCCAATTTGTTGTTGCTCAAGTATCTTAGCCTCGGGGGAGAAGTTACCATGCTCCCCAAGAAGATTGAAACACTAAGTTTCTTGGAGACACTTGATGTTAGGAGAGCCAAGGTTGATGTGATGGTGTTCCCAGTCGAAGCAATAGTGCTTCCCAAATTAATTCACCTCTTTGGGAAGTTTAAACTTTTCGGTAAGGTATCGGATAAAATACTTAAGTTTTTTGATGCGGGAAAAAGTAAACTACAAACTTTAGCCGGATTTGTCACAGACAGTAACCAAGGTTTTCTGCAACTAATTGGTCATATGAAGAACCTGAAAAAAATTAAGATATGGTGCCGGTCTATACCAGATGGAAACAACTTTCATTTGATTTCAAATGCCATTCAAAACTAGATTGAAGACGGCGATGACTTGAACGATGCCCGTTCTCTGTCTGTCCATTTCAACGAATGCTCTGAAGACATCATGAATTTTTCCCTGCAAGGAGCCTGCAATCTTTCCACGCTGAAGCTCCAAGGTGACCTGCACCAAATACCTCCATTTGTTCCCTCATTGGTAGCTCTCACAGAGCTATCTCTGACATCGACTACTCTTCGGCAGGAACTCTTAACTAGCTTGACTGAATTGAGATGTCTAGTTTATCTCAAACTTGTCGCGCAAAATCTCGAGGGTTTTGTCATAAAAGTTGGGGCATTCCAAAGCCTGCAACGACTATGCATGGTGGTTCAGAATCCATCATTCCTTGAAATCCAGGATGGAGCTCTGCCACAGCTTGTGTCTCTCCAGCTGATGTATGAAAATTTGGCAAACCTTCCTTTAATCAACATTGGGGGCATCAAGCGTCTTAGGGAAGTGGTGCTTGATTCTGCGGTAAATGGAAGATCACGGAAAAACTGGGAAGACGTAGCGAAGAAGCACGCAAATAGACCCAGAATTTTGTTCATCGAAAGGACGAGAAGGGCCAGATCAGAACATTCTGTTGCACAGGCAGAGAAACCTTCTACACTTCATCGGAATTGGCTACAAAATGGCATACGGAATCTATTTGTAAGAAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032070