BGIOSGA032316

From RiceWiki
Revision as of 04:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032316| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032316, complete gene.| tag = OS10G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032316

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032316, complete gene.

LocusTag

OS10G0136900

Ensembl Transcript ID

BGIOSGA032316-TA

Ensembl Protein ID

BGIOSGA032316-PA

Length

3891

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2070959..2074849

Sequence Coding Region

2073709..2074849,2071708..2071757),complement(2070959..2071015

Genome Context

<gbrowseImage1> name=IndicaChromosome10:2070959..2074849 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:2070959..2074849 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCCACCGCCGCGGCCGCGCCACCTCACCGGCGCTGCCGGTGACCCTGCCGGACGACGACGACCTCCTCGCCGAGATCCTCCTCCGCCTCCCGCCGCTGCCCTCCTCGCTCCCCCGCGCCTCCCTCGTCTGCAATCGCTGGCGCCGCCTCGTCACCGACCTCGGCTTCCGCGCCCGCCACCACCGGAATCCCTCCATCATCGGCGTCTTTGCCGACGACTTCGGCTTCCCCTTCTTCCGGTCCGTGATGGATCCGCCGGATCTCATCCCAAGGGAGCGATTCTCGATGCGGCTCGCCGAGGACGAGGGCCGCAAGGAGCGGATGTTCTGCGGATGCCGCCATGGCCGCGTCCTCCTCTTGGACCGGAAGCAGAACGAGATCCTCCTGTGGGACCCCGACACCGGCGACCACCTCCGGGTGGCCATTCCGCCGGAGATAGACGGCAAGGAGAAGATCGTCTGGAACGGGGCGGCGCTCTGTGCCGCCGCCGCCGCCGCCGACGACGGCCACGTTCACGGCGGATTCAGCTGTTGCCCCTTCAATGTTGCCTTGGTGGGCGTGGCCAGCAACAACACGCAAATGTTCACTTGCTTCGACACATCGGAGACCGGCAGATGGAGCGACCTCATCTTCACACCTGCTCCATTCTTGGTCTTTGCTTTTCTTGATCCTGGCGTACTCGTTGGCCATTCCCTGTATTGGTTCCCAACTGGTCTTGGCAGTGCAATTCTTCAGTTTGATTTGGATGGGCAAACCCTTGCTGTGATTGAGTGGCCTTCCAATCCAAATTATTATAGCCACTACATGTCTCAGATCTTTCTGGCAGAAGGTGGCTATCTTGGCCTTGTCACTCTGTCATACGACAGCCTTCAAATATGGGAGAGGAAGGTCTGTTCTGAAGGTGTTGCCAGATGGGTGCTGCAGAGGACAGCTGAGCTAAACAAGGTTCTTGAACTGGTATCTGGGGTCAAGACAAGTCATTTGGTCAGATTGGGTTATGCTGAGGATGTTAAGGTGATGCTTCTATGTGCTGATACCAGTGTCTTCATGCTCCAAATTGATTCACTGCAGTCCAGGAAGCTTTGGGAAACCGATATTATGGCCCCGCTTCATCCCTACGCAAGTACTTATGTTGCAGTAATAAAATTTTCATTGGCAGCAAATTATGGTTTAAGAAAATTTGGTAAGGTATCTAGACTTTTGACTGTTATTGATAAGGCGCTGAGATGGATTACTGGTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MSHRRGRATSPALPVTLPDDDDLLAEILLRLPPLPSSLPRASLVCNRWRRLVTDLGFRARHHRNPSIIGVFADDFGFPFFRSVMDPPDLIPRERFSMRLAEDEGRKERMFCGCRHGRVLLLDRKQNEILLWDPDTGDHLRVAIPPEIDGKEKIVWNGAALCAAAAAADDGHVHGGFSCCPFNVALVGVASNNTQMFTCFDTSETGRWSDLIFTPAPFLVFAFLDPGVLVGHSLYWFPTGLGSAILQFDLDGQTLAVIEWPSNPNYYSHYMSQIFLAEGGYLGLVTLSYDSLQIWERKVCSEGVARWVLQRTAELNKVLELVSGVKTSHLVRLGYAEDVKVMLLCADTSVFMLQIDSLQSRKLWETDIMAPLHPYASTYVAVIKFSLAANYGLRKFGKVSRLLTVIDKALRWITGA</aaseq>

Gene Sequence

<dnaseqindica>1..1141#3093..3142#3835..3891#ATGAGCCACCGCCGCGGCCGCGCCACCTCACCGGCGCTGCCGGTGACCCTGCCGGACGACGACGACCTCCTCGCCGAGATCCTCCTCCGCCTCCCGCCGCTGCCCTCCTCGCTCCCCCGCGCCTCCCTCGTCTGCAATCGCTGGCGCCGCCTCGTCACCGACCTCGGCTTCCGCGCCCGCCACCACCGGAATCCCTCCATCATCGGCGTCTTTGCCGACGACTTCGGCTTCCCCTTCTTCCGGTCCGTGATGGATCCGCCGGATCTCATCCCAAGGGAGCGATTCTCGATGCGGCTCGCCGAGGACGAGGGCCGCAAGGAGCGGATGTTCTGCGGATGCCGCCATGGCCGCGTCCTCCTCTTGGACCGGAAGCAGAACGAGATCCTCCTGTGGGACCCCGACACCGGCGACCACCTCCGGGTGGCCATTCCGCCGGAGATAGACGGCAAGGAGAAGATCGTCTGGAACGGGGCGGCGCTCTGTGCCGCCGCCGCCGCCGCCGACGACGGCCACGTTCACGGCGGATTCAGCTGTTGCCCCTTCAATGTTGCCTTGGTGGGCGTGGCCAGCAACAACACGCAAATGTTCACTTGCTTCGACACATCGGAGACCGGCAGATGGAGCGACCTCATCTTCACACCTGCTCCATTCTTGGTCTTTGCTTTTCTTGATCCTGGCGTACTCGTTGGCCATTCCCTGTATTGGTTCCCAACTGGTCTTGGCAGTGCAATTCTTCAGTTTGATTTGGATGGGCAAACCCTTGCTGTGATTGAGTGGCCTTCCAATCCAAATTATTATAGCCACTACATGTCTCAGATCTTTCTGGCAGAAGGTGGCTATCTTGGCCTTGTCACTCTGTCATACGACAGCCTTCAAATATGGGAGAGGAAGGTCTGTTCTGAAGGTGTTGCCAGATGGGTGCTGCAGAGGACAGCTGAGCTAAACAAGGTTCTTGAACTGGTATCTGGGGTCAAGACAAGTCATTTGGTCAGATTGGGTTATGCTGAGGATGTTAAGGTGATGCTTCTATGTGCTGATACCAGTGTCTTCATGCTCCAAATTGATTCACTGCAGTCCAGGAAGCTTTGGGAAACCGATATTATGGCCCCGCTTCATCCCTACGCAAGTACTTATGTTGCAGGTACTTAAGTTTTTGCAATGCGGTAAAATTAGGTGTGTTTTCAGCATTTGACTGCATAACAGATTAATTCATCCGACATATCAAATAAGTAATTTACTGGCTCGTTTCAGAGAGTAACACTATTTTTTTTCATTCAATACCTGTTTCTGTGAGATGACCTTTTAGAAGCCTTGTGTTGTGGTCCATTCTTTTTTTCTCAATTTTGAACATTGAAAGATGTAGAAGTATTTACTATTTAGATTGGCCACTGAGAACCACAGTTAGATTTGTCTTGGAAAATACTAATATACTAGTATTTAGTTGTCGACTCTAATATAAGGAAACTAATGTTCTATCTTGTCTAGAGATTGTAGAATGTCTGGAGTATCACTACAAAAGAACAAAGGGAATACTGTTTTTTTTTCTTAGTCCTGCTACAAGCAATGTATTAATTTGCACAAGAAGAAATCACTATTTATATGTTTTGTATTGGTCAATGAAGTTCTATTTTTTACTAGATTATGTTAGCTTCAGGATGTATTACTCTAGTCTATTTACATATTAGTGATTACTTGCACAGAATAATTTTGGATAACTTATGCACCCCCTAGTTACAAGGTTTATGAATATACTGTTTGGAGGAATATTGCTTCCTTTTAGAATTTTATTCAGTTTACATATATGTATCTTGTATGTGTGTTATGTATCTTGTATGTGTGTTTTATGGATATCTGGAGCCTTTATTATTTTAGGTGCTAGTGTGTTACACAGGCTTTGCATGGCGATTTGTGATTACAGAAGTATTTGTCTGATTATGATTTGTCAGATGTCCACTAAATTTCCAAAATAAGTGAATTTCACTTTAGACACATTTTTATTACCCTAGCTGCAGTTTTACTAACTCACAAAAGTTCCCGGATCGATGGATCGAGGAATGTGGGATGTCATTTTCTAAAAACATGGAACGTTGGTTGGAAAGTGTTCCTACGTTGTTTGGAACGTCCCTCTATCTCTCCATGGTCGTACCACAGCGTGACAAGGGCAATGCTTGTCCATTCTCCACTGCATGATGGTGCTGACGCTCGTACATGCACAGCAGGACGTTGGCGAGCAGCAAATGAGCAACAACAGCGTTCGTCCCATCCAGATGAGTTCAAATTTAGTGAAAGTTAATTAAATTATAGATTTTGCTTGGAAATTTTGGATTGCCTTTCCATCATTTTTCATCGTGCCACATTTCTCTATCAGACCGCTCTACTTGTTACTCCATACCTTGTACTAGGACAACTCTCAAGACGAAGTTCCATCCATTTTCGGGACGAAGGTCCACATAGTTCCCAATTTCTCGATCTGGAATGAAGTTCGTGGAACAAGGAACACACCCAAGTTCCACATTCCATAGGACATAAAGCTGCACAATGGACCAGGGTATATCGAAGTTTTAACATACTTGACAAAACATAGCAGTCTTGAACCAGGGGTATTGCTTGAGATTCTACGATGGCTATTTGGCCCATGACCCATCCATGGAAGGAGTAAGAGATGGTAGATGGCACTAGCTTGTGAGCACAAGGGGATAATGAGTGTGCTTTGTCAGAGCAGTAGTGGCTTCTGTGAGCGGAGAGATCAGCAGCAAACTGCACCTCTGATTTGCATGCCCAGGCAACTCGATCCTCCGCTGATCCGACGAGGAGCGAAGTAGATTCCAGGCTCCACAAATAGGCTAGGGAATCGAATCGAATTGCTGTATTTTGGTGTGTTTAGGTGGCATAAAGTGGAAAGGTTGCTAAACATGGTCCACTGTGCAGCTAGGGTAATTAAAAGGGGTCCATAGTGAAATTCACTCTTCTATAAAATAGATAACTAACTACAGTAAAGAACTCATTGGTAGATGCTTGGAGCTCTGGTTCAAGGTGAAATTAACTAGATCCCTCACTTGCATCCTCATTGTGCATACTTTTGTACTTTTTAGTAATAAAATTTTCATTGGCAGCAAATTATGGTTTAAGAAAATTTGGTAAGGTTTGTGTTGGTACCATGCTAAGATAAATGATATTTGTGGACCAAAAGATATCACTTATGAGATATTGAGGTACACATCAGAAAGAGTTGAGTGTACAATCATAAACGGTAGTAAATCATGAATGGCTGATGTACCTATGCTTCTCCGACGACTTTTAATTTGAATATAGTAATAATTGGTTAGTCCTTAAATTTCTAAAAGTAGACGTATGAACTAGAAACAGGTGTTTCTACTTTCTACCTGCCAAGTGTCGTTGTGCCCCTTTAGTTGCTAGTTCGAAACAGTGAAGTAGTGAACCTTTAGTTGCTAGTTAGATGTAGAGAGAAACGCCAGGGGTCTTCTAGCTAGCTCCACAAGATGGTGGGCTAGCAGACCTGGGTTCGAAGGCTCACTCCTTCTATTTATTTAATATTAGGTCCTTCCCTAATATGTGTTTTTTTTCTAGTTCGATGTAGCCGAAATTCGAGAACAGTTCCAATAATTCAATTGGTCCTCTATTGTCTGTTCAGTGTTTCTTCTTTTTGATTTTGCCTAGTAATAATACTGACATTATTCAACTTTGGAAATTTGATGTATGGTTCACAACGCTGAAAATAATAGTTACATTTTGCATTGCACCAAAAAAAAATGCGATATAACTTTGTGACTGTAAATTTATACCAGAATGACTGATGGAATTGTTCTCTTGCAGGTATCTAGACTTTTGACTGTTATTGATAAGGCGCTGAGATGGATTACTGGTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032316