BGIOSGA032329

From RiceWiki
Revision as of 04:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032329| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032329, complete gene.| tag = OsI_326...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032329

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032329, complete gene.

LocusTag

OsI_32654

Ensembl Transcript ID

BGIOSGA032329-TA

Ensembl Protein ID

BGIOSGA032329-PA

Length

6397

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1824013..1830409

Sequence Coding Region

1830156..1830409,1829797..1830041),complement(1828364..1829331,1827488..1827626),complement(1825651..1825935
,1825010..1825097),complement(1824013..1824130

Genome Context

<gbrowseImage1> name=IndicaChromosome10:1824013..1830409 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:1824013..1830409 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGAATATTTGGTTGGGCCACTGCTCTCCAAGGTGCTGGAGAAGGCTTCCAGCTTTCTTGTAGACATGTACAAGGTGATGGATGGCATGGAGGACCAGCGTGAGACTCTGGAGCGCTTGCTTCCAGCCATCCTCGATGTCATCCAAGATGCGGAGGAGAAGAAAAATCATCGATCCGGTCTAGTTTGCGCTTGGCTCAAATCACTCAAGAAGGTGTCCTACGAGGCAATTGACGTCTTCGACGAGTTCAAGATGGGCAAGAAACTGCGAAAGATCGTGGAGAAAATCAAGGAACTTGTCTCGGAGATGAACTCCTTCGGACTCGTACACCAGCAGGAAACACCCAAGCAGTGGAGGAAAACTGATTCCATCATGGTTGATTTTGACAAGGATATTGTTATCAGATCTAGAGATGAGGAGAAGAAGAAGATTATCAGGATATTGCTTGATAAAGCTAATAACACGGACCTCACTGTCCTTCCTATTGTTGGAATGGGAAAACAAGAAAACAAACCAACATTTCCTCTGCTTGAGGAGGTTGAAATCAGTAACTGTCCAAAGTTGTCTAGTCTACCCGAAGCACCAAAGCTGAAGGTTTTAAAGCTAAATGAAAACAAGGCAGAGCTGTCATTGCCATTGCTTAAATCCAGATACATGTCCCAATTGTCCAAGTTAAAATTGGACGTGCTTGACAAAGAAGCTATATTGCAGCTTGATCAAATTCACGAATCATCTCTCTCAAATATGGAGTTAAGGCACTGCAACTTTTTCTTCTCCACAATCCCATCAGAACCAATAATTGGGATTTGGAAATGGTTTCGACAACTTGTGTATTTGGAAATCAAGTCCAGTGATGTGCTCATCTACTGGCCGGAGGAAGAGTTCCTATGCTTGGTGTCCTTGAAGATGTTGGCCATTTTTGGTTGTGTTAATCTAATAGGCCGTACCACGCTGGTGAAAGGTGAGCCAACTCGTTGTGCAACAGATCAGTTCCTGCCATGTCTAACGTCATTATCAATTTGCTGTTGTGATAACTTGAGAGAGCTATTCGTTCTACCCCCATCTGTCACCCTCATTCATGTTTCTGGATGTCGCAATTTTGAGTTCATATGGGGTAAGGGGGATATAGAGTCGGAGAATGTACATGTAGAACAGCATGACACATTTACATCATCGGAGCACTGCAATGACCTTGAGTACAGAAGTGTACCAGAGCAATCATCATCAGCAGTGAATCATCCTCTGCCATGCCTAGAAATGATACATATCTCTTTCAATGATAAAATGGTAGAACTTCAGAACCTACCACCGTCCCTCACGTCACTAGAATTTCATTCTTGTCCGAAGCTTCAGTCTCTATCAGGGCAGCTGCATGCCCTGAAGTTTTTGGATATTAGGTGCTGGAATAAACTGGAGTCACTGAATTGTTTGGGAGAACTGGCATCATTAGAAAGACTTTGTCTTGTGTTATTCATTTTTCCTTGGGTACAGAGCATAAACGCCCGACATTATGGGATCCAAAATCTTGGAAATATGCTATTCCTGGCTGTCGGTGAGCCAGCGCACTTCGGTGATGACCTAAATTTGGAGAAATCAGGAGACGGGCAGCTGCATGACCTGAAGTTTTTGGATATTAGGCGCTGCAATAAACTGGAGTCACTGAATTGTTTGGGAGACCTGCCATCATTAGAAAGACTTTGTCTTGTGAGCTGCAAACGTCTAGCATCCTTACCATGTGGTCCAGAGAGCTACTCATCTCTTTCAACTATTGCTATTCGATATTGCCCAGCCATGAATATGAAGCCGCTATATGAACGCCTTAGGCCACGGTTGGATATTCTTAAGGAAAGAGATTTGTCACATGCCCATGCAAAATGTCCTTATGGAGGTGTTATTCATTTTTCCTTGGGTACAGAGCATAAACGCCCGACATTATGGGATCCAAAATCTTGGAAATATGCTATTCCTGGCTGTCGTCATGGTGTTATCGTCATCACACCAACACCGATTGGGCGATTGGGCGACTCCGACTTCACCAGGAAACACCAGGGTTATGGCAACAGTCTAAACCGCACCAAAGCACAACTCAACTAG</cdnaseq>

Protein Sequence

<aaseq>MAEYLVGPLLSKVLEKASSFLVDMYKVMDGMEDQRETLERLLPAILDVIQDAEEKKNHRSGLVCAWLKSLKKVSYEAIDVFDEFKMGKKLRKIVEKIKELVSEMNSFGLVHQQETPKQWRKTDSIMVDFDKDIVIRSRDEEKKKIIRILLDKANNTDLTVLPIVGMGKQENKPTFPLLEEVEISNCPKLSSLPEAPKLKVLKLNENKAELSLPLLKSRYMSQLSKLKLDVLDKEAILQLDQIHESSLSNMELRHCNFFFSTIPSEPIIGIWKWFRQLVYLEIKSSDVLIYWPEEEFLCLVSLKMLAIFGCVNLIGRTTLVKGEPTRCATDQFLPCLTSLSICCCDNLRELFVLPPSVTLIHVSGCRNFEFIWGKGDIESENVHVEQHDTFTSSEHCNDLEYRSVPEQSSSAVNHPLPCLEMIHISFNDKMVELQNLPPSLTSLEFHSCPKLQSLSGQLHALKFLDIRCWNKLESLNCLGELASLERLCLVLFIFPWVQSINARHYGIQNLGNMLFLAVGEPAHFGDDLNLEKSGDGQLHDLKFLDIRRCNKLESLNCLGDLPSLERLCLVSCKRLASLPCGPESYSSLSTIAIRYCPAMNMKPLYERLRPRLDILKERDLSHAHAKCPYGGVIHFSLGTEHKRPTLWDPKSWKYAIPGCRHGVIVITPTPIGRLGDSDFTRKHQGYGNSLNRTKAQLN</aaseq>

Gene Sequence

<dnaseqindica>1..254#369..613#1079..2046#2784..2922#4475..4759#5313..5400#6280..6397#ATGGCTGAATATTTGGTTGGGCCACTGCTCTCCAAGGTGCTGGAGAAGGCTTCCAGCTTTCTTGTAGACATGTACAAGGTGATGGATGGCATGGAGGACCAGCGTGAGACTCTGGAGCGCTTGCTTCCAGCCATCCTCGATGTCATCCAAGATGCGGAGGAGAAGAAAAATCATCGATCCGGTCTAGTTTGCGCTTGGCTCAAATCACTCAAGAAGGTGTCCTACGAGGCAATTGACGTCTTCGACGAGTTCAAGTAGGAGTCGCTCCGGCGTGAGGCCAAGAAGAAAGGGCACCGCAACCACACTATGCTTGGCATGGACTCTGTAAGCCTCTTCCCTTCTCGTAATCCTATTATCTTCCGATATAGGATGGGCAAGAAACTGCGAAAGATCGTGGAGAAAATCAAGGAACTTGTCTCGGAGATGAACTCCTTCGGACTCGTACACCAGCAGGAAACACCCAAGCAGTGGAGGAAAACTGATTCCATCATGGTTGATTTTGACAAGGATATTGTTATCAGATCTAGAGATGAGGAGAAGAAGAAGATTATCAGGATATTGCTTGATAAAGCTAATAACACGGACCTCACTGTCCTTCCTATTGTTGGAATGGGTGGGCCTTGGGCAAGACTTACCTTTGGCGCAACTTCATATACAACTCATCCCTCAAATTGAAGAAACATTTCCCGCTACCGACAGTCGGTTGTTGTGTTCTCCGGATTTGTTTAATGTTCGTCACTATTTGCAAACATCATATGTACTGAGCACAGAGAAGAGATCGTGAAAAGGCTTTTCAGGAGCCTGCACAGAGAAGTAGGTGGAATGAAGTAATCTCATATCTTGATGACGTATGGGACGGGATTATGATAAAGGTAGTTTAACACCCCTCTTAAGAAGGTGGTATGGGTAGTGCAGTACTAACAACAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGAGGAAGCAAGAGATGGAAAAGTACAAATATTTCCAGCATTAAAGGAAGTCAAGTTAATTGATTTGGAAAGGTTTGAGAGTTGGGTGGAAACTGAAGGAAAACAAGAAAACAAACCAACATTTCCTCTGCTTGAGGAGGTTGAAATCAGTAACTGTCCAAAGTTGTCTAGTCTACCCGAAGCACCAAAGCTGAAGGTTTTAAAGCTAAATGAAAACAAGGCAGAGCTGTCATTGCCATTGCTTAAATCCAGATACATGTCCCAATTGTCCAAGTTAAAATTGGACGTGCTTGACAAAGAAGCTATATTGCAGCTTGATCAAATTCACGAATCATCTCTCTCAAATATGGAGTTAAGGCACTGCAACTTTTTCTTCTCCACAATCCCATCAGAACCAATAATTGGGATTTGGAAATGGTTTCGACAACTTGTGTATTTGGAAATCAAGTCCAGTGATGTGCTCATCTACTGGCCGGAGGAAGAGTTCCTATGCTTGGTGTCCTTGAAGATGTTGGCCATTTTTGGTTGTGTTAATCTAATAGGCCGTACCACGCTGGTGAAAGGTGAGCCAACTCGTTGTGCAACAGATCAGTTCCTGCCATGTCTAACGTCATTATCAATTTGCTGTTGTGATAACTTGAGAGAGCTATTCGTTCTACCCCCATCTGTCACCCTCATTCATGTTTCTGGATGTCGCAATTTTGAGTTCATATGGGGTAAGGGGGATATAGAGTCGGAGAATGTACATGTAGAACAGCATGACACATTTACATCATCGGAGCACTGCAATGACCTTGAGTACAGAAGTGTACCAGAGCAATCATCATCAGCAGTGAATCATCCTCTGCCATGCCTAGAAATGATACATATCTCTTTCAATGATAAAATGGTAGAACTTCAGAACCTACCACCGTCCCTCACGTCACTAGAATTTCATTCTTGTCCGAAGCTTCAGTCTCTATCAGGGCAGCTGCATGCCCTGAAGTTTTTGGATATTAGGTGCTGGAATAAACTGGAGTCACTGAATTGTTTGGGAGAACTGGCATCATTAGAAAGACTTTGTCTTGTGAGCTGGAAAACGTCTAGCATCCTTAGCATGTGGTCCAGAGAGCTACTCATCTCTTTCAACTATTGCTATTCGATATTGCCCAGCCATGAATATGAAGCCGCTATATGAACGCCTTAGGCCACGGTTGGATATTCTTAAGGAAAGAGATTTGTCACATGCCCATGCAAAATGTCCTTATGGAGGTACCTTTCCATTGCTTATTCCTTCCTTTTTGTTTTTTTTTCCCTACATACTAGTATTGCATATCCATATGTTGCAGAGTATGCACTTAAAAATTTCAATCACCTCCCCCTCTGTTTTATAGTCAATAATACAATTACAAGGTTGTCAACAAAATTTCCTTATGTTTCAACAAACACAGGAGCCATGGTTAAATGTTTTCTTCTTCTGTTTTCAGATGCATGAGCATTATTTCCCTCCACTGTTTCTTTGTTAAGGACTGGTTTGCTTTCAATTAGTAGGAAGCCCATTGAAAACTAGTACACTAACTCTACTCCAACCTTTTCCCTTTTGCAATGAGCCTTATTTGATGACACGAAGTGTCATTCCACTAAAATCGATGAACTTTCTGGCTTTTTGACTGATCATTGATAAGTATGTGTATACCTTTGCAATGCCTCTGAATTGTTATTACATACATGCTCATGTAACAAAATGGTGACTATCTGTAGTTTTATGATAATCTCGTATATAGTTTGGTGAAAGTTGACATCATTCATGGATATGATGTACAGGTGTTATTCATTTTTCCTTGGGTACAGAGCATAAACGCCCGACATTATGGGATCCAAAATCTTGGAAATATGCTATTCCTGGCTGTCGGTGAGCCAGCGCACTTCGGTGATGACCTAAATTTGGAGAAATCAGGAGACGGTACATGTTTATGGAACTGATTGTTTTCATCTTGACTGATCCAACCTGTTGTGTAATCTGAAAAATTGGTTTTCTGATTATGCATTGCTTTATCAATAGGTGGCTCCAAGTATAATCAATATGTCCTCTTGAAAGGAATCTCTGATATATTTTTTTCTAGTTTGTTTGGGATTTTTCATGTTATGACTAATTGAACGCAGCTTGAGGATCTCAGATTTCAGCAGAAAATATTCGAACTTGCAATCTTGTCTGAACAAGTACTCCTGTATCCATGTGATAGTATTGTGTATTTATCTTGTCTGAATATTTACACCTACTTCTTGCGAAGCACAGGCATAGTCAGTCTTTCTTTTGATGGTAATTCATGCAGTTGGTCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCGTACGCGGCAACCTCCGTTTCGCGTGGCTCGATCGGAGGCGGGTGCAGGAGCGCGGGACCCACGCGCGATTTCGCGAGCGCGCGCGGGAGCGGCTCAGCAGGACGCGTGGCGGCTTCGGGCTGGTTGGGCGCTGGCGAGCGCGCGCTGAGGAAAAGGAGACGGAACGCGCACGACGCGGCTGGGCAACGTGGCAAGTTTGGATTCGTCAAGACGGAGAGCACGCGGATCCATCAGCAAGAAGACCATGTGAGGGTTCGGATCGATGAGGTGGCAATCATCTGGAGCTTTTCCTTTGAGTAGAAGGAACAATGGATGGACCAGATCTGTTCTGAGTTAGGGTTTCGCCCTAGGGGTATTTGAGACAATGTCTTAGGGGTCTTAGGCTATAAATAGAGAGATGGATGTAAGGGTGGAGGTTGCTCCTTTTGGTAATCATTTTGAGATGCTCGGTGAGAGAGTTTCCGTGTGAGTTTGGAGTGTGTTTGCCCGAGAGGCTTTTGTATTAGGATTAGTTTGGAGTGTGTTTGTCCGAGAGATTTTAAGTTTGTGTTAATGTTCCTCTGAAGGTGTATGTTTGCTCCTAGTTGAGCGGTTATTTTGCATCACCTATAAATGAAATGATTTGAAGGATTTCATTTTTGCCTTGTCCATTTAAATTCCGCAATTTAAATTCAGGATTTCATTTTTGCCTTGTCCATTTAAATTCCGCAATTTAAATTCCGCTTGCAATTTGAACTTTGCGATGATGAGTTTTGCTCTCTCTTCCTCACCTCTCTTCTAGTTTCGGGAATTCCTTTTCTCTTCCTCCTCTAGTTTCGGGAATTCCTTCTCTCTTCTTTTTCTCTCTTCTTTTCTAGATCCGGCTTCTCTAATAGCCGCGGTTCTAGTAAGGATTTTGAGAAATCCGGCTTGATGAGTATTTTCGGGGGCAAGATTTGAATTGCTATATTCACCCCCCCCCCCTCTATAGCTGTTCTTGGTTTTTCAGAATCATCCTCTGCCATGCCTAGAAAGGATACATGTCTCTTTGAGTGATAAAATGGTAGAACTTCAGAACCTACCACCGTCCCTCACGTCACTAGAATTTCATTCTTGTCCGGAGCTTCGGTCTGTATCAGGGCAGCTGCATGACCTGAAGTTTTTGGATATTAGGCGCTGCAATAAACTGGAGTCACTGAATTGTTTGGGAGACCTGCCATCATTAGAAAGACTTTGTCTTGTGAGCTGCAAACGTCTAGCATCCTTACCATGTGGTCCAGAGAGCTACTCATCTCTTTCAACTATTGCTATTCGATATTGCCCAGCCATGAATATGAAGCCGCTATATGAACGCCTTAGGCCACGGTTGGATATTCTTAAGGAAAGAGATTTGTCACATGCCCATGCAAAATGTCCTTATGGAGGTAGCTTTCCATTGCTTATTCCTTCCTTTTTGTTTTTTTTTTCCCTACATACTAGTATTGCATATCCATATGTTTCAGAGTATGCACTTAAAAATTTCAATCACCTCCCCCTCTGTTTTATAGTCAATAATACAATTTCAAGGTTGTCAACAGAATTTCCTTATGTTTCAACAAACACAGGAGCCATGGTTAAATGTTTTCTTCTTCTGTTTTCAGATGCATGAGCATTATTTCCCTCCACTGTTTCTTTGTTAAGGACTGGTTTGCTTTCAATTAGTAGGAAGCCCAATGAAAACTAGTACACTAACTCTACTCCAACCTTTTCCCTTTTGCAATGAGCCTTATTTGATGACACGAAGTGTCATTCCACTAAAATCGATGAACTTTCTGGCTTTTTGACTGATCATTGATAAGTATGTATATACCTTTGCAATGCCTCTGAATTGTTATTACATACATGCATCAGTAACAAAATGGTGACTATCTGTAGTTTTATGATAATCTCGTATATAGTTTGGTGAAAGTTGACATCATTCATGGATATGATGTACAGGTGTTATTCATTTTTCCTTGGGTACAGAGCATAAACGCCCGACATTATGGGATCCAAAATCTTGGAAATATGCTATTCCTGGCTGTCGGTGAGCCAGCGCACTTCGGTGATGACCTAAATTTGGAGAAATCAGATGACGGTACATGTTTGTGGAACTGATTGTTTTCATCTTGACTGATCCAACCTGTTGTGTAATCTGAAAAATTGGTTTTCTGATTATGCATTGCTTTATCAATAGGTGGCTCCAAGTATAATCAATATGTCCTCTTGAAAGGAATCTCTGATATATTTTTTTCTAGTTTGTTTGGGATTTTTCATGTTATGACTAATTGAAGCAGCTTGAGGATCTCAGATTTCAGCAGAAAATATTCGAACTTGCAATCTTGTCTGAACAAGTACTCCTGTATCCATGTGATAGTATTGTGTATTTATCTTGTCTGAATATTTACACCTACTTCTTGCGAAGCACAGGCATAGTCAGTCTTTCTTTTGATGGTAATTCATGCAGTTGGTCTGGTGGTAATCTGCTACCTCCTGCCTGCTGCTGGTAATAGTATCAGTTTCAGAAAAATGAAGAGCAGAAATCAAGCATGGTTACTGTTTGGTCAACAGATCAAGATGAGCAAAATCCAAGGCACTACGAGTTATTTCTACTGGCCGAGATCAAAGATGATGTACTCATGCTGGAAGCGAGAAGCTCACATATATTTTTTTTTCGAACGGTCAGGCCTTTGCCGACGTTTTATATAAAGAAGAAGGTGTCCCATTTTAAAGAGAAAATAGGGCCAAACCTTACAATGCACAGTTAATTAAGGAAAACTAGACGAAACCGTAACTGTCACACAACACCACCAACTAATCTAAGCTACCACAACAACGAGAACAGGATAGCAGAACTCAACACCCAACCAAAGCCGCTAACAAGGCACAAGCTAGACAAACATACGGCCCCCACACATTGACACAGTCATGGTGTTATCGTCATCACACCAACACCGATTGGGCGATTGGGCGACTCCGACTTCACCAGGAAACACCAGGGTTATGGCAACAGTCTAAACCGCACCAAAGCACAACTCAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032329

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA032329&oldid=31551"