BGIOSGA032625

From RiceWiki
Revision as of 04:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032625| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032625, complete gene.| tag = OS10G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032625

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032625, complete gene.

LocusTag

OS10G0184200

Ensembl Transcript ID

BGIOSGA032625-TA

Ensembl Protein ID

BGIOSGA032625-PA

Length

2923

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5015990..5018912

Sequence Coding Region

5015990..5016048,5016905..5018912

Genome Context

<gbrowseImage1> name=IndicaChromosome10:5015990..5018912 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:5015990..5018912 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTCGCCCGAGCTTCCCTGCACTGCACGGCGGCAGCGGCAGCCCACTCCTCCCGGCTTTAGTGGCGAATGCCCAGCAGTTCTGGAATGAGTGGGAGATCCAGTGCCTTGTGCTTGCGAGCTTTAGCTTGCAAGTGTTCCTTCACTTCTTCTCTAGCATTCGCAAGGGTAACACCTCCCGGTTATTAAGCTCGCTGCTTTGGCTGGCATACTTGTTAGCCGACTACGTTGCAACATTCACGCTGGGTCGCCTGACGCTCCACGTTGATGATCCACGCCATCAGCTTGTGCTCTTCTGGACACCGCTCCTGCTGCTGCATCTTGGTAGCCAAGAGACAATTTCGGCCTTCTCCATTGAGGATGCAATGCTGTGGAAGCGTCACCTCCTTGGCCTCGTCTCCCAGGTGGCCCTGGCAATTTATATCGTAGCAAAGTCATGGCGTCCGGACAAGCAACTTTTGGGGCCCTTGGTGCTTATGTTCATTTCTGGAACAATCAAGTATGCGGAGAGAACATGGGCTCTTATGACTGCCAGCAGCTCAATGTCGCCAGGGAGCGATTCCATGGCAGATCATGTGCTGGGGGTACAAGACGATGTTATCTTAGACGCTAAATCCTATTTTGATGAGTTGCATAGTATTTTCCCTGGGAAGAATGTGCTGGACATTGAAGGTCACAATGGAGGAAGAAGAACAGATGACGATGGCTATGAGGGTCTGGTGATGGCTGCTGGCAAGGGCTTCCGGTTATGCCTTGATTTTCTGACAGACATGACCCCTTTCCTGGTATGGTCTAACACAGACACTATAATTGATAGTGCCATTAAGAAGCTCCGTACTTCAAATCCTGAAACACAAGTGCAGATGGCTTATAAACTGGTGGAGATCCAGCTCTCACTTATCTATGATTACTTATACACCAAGTATGGGGCACTTCAGTTCCGCCTTGGCCTTGTCAGCAGCGGAATCGAGCGGCTCATTACATTTTTCTCAACTTTGGCAGCCCTAGGCTTGTTTGTGGGTGCCAATCTCAAGGGGCCATTCAACTACAGCAGAGAAGATGTCATGGTGTCCTACGTTCTGCTAGCCGGTGCAATCACACTGGACATATCCTCCATCTTCATGCTTATCTCGTCATATTGGCTGCAGTTACACCGGAGAGGTGGCTTGTTTGGCTGTTCTTTCAGTCTTGCCAAGTGTGTTCATGCAGGGAGCAAACCACTGTGGTCAGAGAAGATAGCGCAGTATAACTTGATTGATGCATGCATCCAAGAAGAACGTGGTGGCATAATATGCGGTTGGGTGATGAGGAGGACAGGCATTGTGTCTGACATCAATATGAGTAATACAGTCTCTCCTGAACTGAAGAAATTGGTACTGGACAAACTGTTCGAGGTAGCAAGCACCCGGAGTGTAAGTGATTACTGGGACTGGGATTTCAGCAAGTACCGTGGCATGTGGTTGCAGTGGTGGCTGCAGGAGGGGAGAATCCAAGCTGACATAGCTCAAGGAATACTAACTGATGGCATAACCGACACTGACTTGTATTTTCCAATGACAGTCATTGTTTGGCACATCGCGACGGAGATGTGCTGGTTCGCCGACGAGGATGACTATTCCCCATGCAGGGCCCCGAGCATGGAGCTGTCAAGGTATGTCATGTACCTCGTTGCAAAACGGGATGTGATGAGTGGCAGCAATGGACACTTTGAGCTTGGCAAGGCACGCCGCCAGGTGAAGCGCATCCTTGAAGGACGGGGTATCAGTGATGAGAGGGGGCTCCTGAAGTATGCACGACAGGCAACCGGCCAGGTGACTGAGCCATGCTTCAGTCGTGGCCGTGTGATCACCGATCACCTTCTCAAGATAAGCAACGGAGCTCAGCGTTGGGAGCTCATCTCCATGGTGTGGATTGAGATGCTGTGCTACCTTGGACCAAACTGTGGGGCTCAGTTCCATGCCAAGCATCTCAGCACTGGTGGCGAGTTCGTCACACATGTCAGGATCCTACTGGTTATTCTTGGCATTCCTTTTCTAAGGTCGGACATGAAACCAGGAAAGTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MVRPSFPALHGGSGSPLLPALVANAQQFWNEWEIQCLVLASFSLQVFLHFFSSIRKGNTSRLLSSLLWLAYLLADYVATFTLGRLTLHVDDPRHQLVLFWTPLLLLHLGSQETISAFSIEDAMLWKRHLLGLVSQVALAIYIVAKSWRPDKQLLGPLVLMFISGTIKYAERTWALMTASSSMSPGSDSMADHVLGVQDDVILDAKSYFDELHSIFPGKNVLDIEGHNGGRRTDDDGYEGLVMAAGKGFRLCLDFLTDMTPFLVWSNTDTIIDSAIKKLRTSNPETQVQMAYKLVEIQLSLIYDYLYTKYGALQFRLGLVSSGIERLITFFSTLAALGLFVGANLKGPFNYSREDVMVSYVLLAGAITLDISSIFMLISSYWLQLHRRGGLFGCSFSLAKCVHAGSKPLWSEKIAQYNLIDACIQEERGGIICGWVMRRTGIVSDINMSNTVSPELKKLVLDKLFEVASTRSVSDYWDWDFSKYRGMWLQWWLQEGRIQADIAQGILTDGITDTDLYFPMTVIVWHIATEMCWFADEDDYSPCRAPSMELSRYVMYLVAKRDVMSGSNGHFELGKARRQVKRILEGRGISDERGLLKYARQATGQVTEPCFSRGRVITDHLLKISNGAQRWELISMVWIEMLCYLGPNCGAQFHAKHLSTGGEFVTHVRILLVILGIPFLRSDMKPGKF</aaseq>

Gene Sequence

<dnaseqindica>1..59#916..2923#ATGGTTCGCCCGAGCTTCCCTGCACTGCACGGCGGCAGCGGCAGCCCACTCCTCCCGGCGTATGGCCGCGGCGGCGCTCGCGACTCGCCAACCCCTCTCGCGGCTGCGGCTCTTCCCGATCCGGCTGTAGGATTCCAGGTACCTTCCCCCTTTGCTGCTCAATGAAGTCGCAGGACTGCTGCAGAAATTTCTTCCGATTCCAAAATGCGTTTGTAAATTTTGTTCGAAACTTCTGTAGAATTTTGAAATTTCGGGTGACCGCCGAAATTTTTTACGATACCGATAGTGTTAATAAGTGTTAACCCGTTACCCCTGCTATCAATAGACTTGTATGGACTCTTGTGTAGAAGGCATTGTATCGCATAAATATCACACACGAATATGTGGGTGTTAAAAGCTTATGTTTTGGTGTGTTTGTTGAAACAGTTTGTGTGAGGAAACTCAGTAATCTCTAAGAGGGAAGATTTTATGGTTCAATCTTAGCAGGGATTTTTTTTTTTTTTGGGGGGGGGAGGGGGGAATCTCAACAGGAACATCTAAAAACTGATATGAAGTTCAAACTGTAAAAATGCATTCAAATTTTTCATAAAACGTTTTTGGAATTATTCTCCAGGTAGTTGCATGGCTTGATAACTACTCCCTCCATCCCAAAATGTTTGACACCGTTGACTTTTTAAAAAATATTTGACCATTCATCTTATTCAAAAAATTTAAGTAATTATTAATTTTTTTCCTATCATTTGATTTATTGTTAAATATTTTTATTTATACATATAGTTTTACACATTTCACAAAATTTTTTGAATAAGACAAACGATCAAACATGTTTAAAAAAGTCAACGGCGTTAAACATTTAGGAAATGAGGGAGTAGTTTGATTGACAACTAACATGGGATTTTTGGTCCTTTGATCCAGTTTAGTGGCGAATGCCCAGCAGTTCTGGAATGAGTGGGAGATCCAGTGCCTTGTGCTTGCGAGCTTTAGCTTGCAAGTGTTCCTTCACTTCTTCTCTAGCATTCGCAAGGGTAACACCTCCCGGTTATTAAGCTCGCTGCTTTGGCTGGCATACTTGTTAGCCGACTACGTTGCAACATTCACGCTGGGTCGCCTGACGCTCCACGTTGATGATCCACGCCATCAGCTTGTGCTCTTCTGGACACCGCTCCTGCTGCTGCATCTTGGTAGCCAAGAGACAATTTCGGCCTTCTCCATTGAGGATGCAATGCTGTGGAAGCGTCACCTCCTTGGCCTCGTCTCCCAGGTGGCCCTGGCAATTTATATCGTAGCAAAGTCATGGCGTCCGGACAAGCAACTTTTGGGGCCCTTGGTGCTTATGTTCATTTCTGGAACAATCAAGTATGCGGAGAGAACATGGGCTCTTATGACTGCCAGCAGCTCAATGTCGCCAGGGAGCGATTCCATGGCAGATCATGTGCTGGGGGTACAAGACGATGTTATCTTAGACGCTAAATCCTATTTTGATGAGTTGCATAGTATTTTCCCTGGGAAGAATGTGCTGGACATTGAAGGTCACAATGGAGGAAGAAGAACAGATGACGATGGCTATGAGGGTCTGGTGATGGCTGCTGGCAAGGGCTTCCGGTTATGCCTTGATTTTCTGACAGACATGACCCCTTTCCTGGTATGGTCTAACACAGACACTATAATTGATAGTGCCATTAAGAAGCTCCGTACTTCAAATCCTGAAACACAAGTGCAGATGGCTTATAAACTGGTGGAGATCCAGCTCTCACTTATCTATGATTACTTATACACCAAGTATGGGGCACTTCAGTTCCGCCTTGGCCTTGTCAGCAGCGGAATCGAGCGGCTCATTACATTTTTCTCAACTTTGGCAGCCCTAGGCTTGTTTGTGGGTGCCAATCTCAAGGGGCCATTCAACTACAGCAGAGAAGATGTCATGGTGTCCTACGTTCTGCTAGCCGGTGCAATCACACTGGACATATCCTCCATCTTCATGCTTATCTCGTCATATTGGCTGCAGTTACACCGGAGAGGTGGCTTGTTTGGCTGTTCTTTCAGTCTTGCCAAGTGTGTTCATGCAGGGAGCAAACCACTGTGGTCAGAGAAGATAGCGCAGTATAACTTGATTGATGCATGCATCCAAGAAGAACGTGGTGGCATAATATGCGGTTGGGTGATGAGGAGGACAGGCATTGTGTCTGACATCAATATGAGTAATACAGTCTCTCCTGAACTGAAGAAATTGGTACTGGACAAACTGTTCGAGGTAGCAAGCACCCGGAGTGTAAGTGATTACTGGGACTGGGATTTCAGCAAGTACCGTGGCATGTGGTTGCAGTGGTGGCTGCAGGAGGGGAGAATCCAAGCTGACATAGCTCAAGGAATACTAACTGATGGCATAACCGACACTGACTTGTATTTTCCAATGACAGTCATTGTTTGGCACATCGCGACGGAGATGTGCTGGTTCGCCGACGAGGATGACTATTCCCCATGCAGGGCCCCGAGCATGGAGCTGTCAAGGTATGTCATGTACCTCGTTGCAAAACGGGATGTGATGAGTGGCAGCAATGGACACTTTGAGCTTGGCAAGGCACGCCGCCAGGTGAAGCGCATCCTTGAAGGACGGGGTATCAGTGATGAGAGGGGGCTCCTGAAGTATGCACGACAGGCAACCGGCCAGGTGACTGAGCCATGCTTCAGTCGTGGCCGTGTGATCACCGATCACCTTCTCAAGATAAGCAACGGAGCTCAGCGTTGGGAGCTCATCTCCATGGTGTGGATTGAGATGCTGTGCTACCTTGGACCAAACTGTGGGGCTCAGTTCCATGCCAAGCATCTCAGCACTGGTGGCGAGTTCGTCACACATGTCAGGATCCTACTGGTTATTCTTGGCATTCCTTTTCTAAGGTCGGACATGAAACCAGGAAAGTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032625