BGIOSGA032709

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Revision as of 04:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032709| Description = Beta-galactosidase 15| Definition = Oryza sativa Indica Group BGIOSGA032709, complete gene.| tag = | tid = BGIOSGA03...")
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Gene Name

BGIOSGA032709

Description

Beta-galactosidase 15

Definition

Oryza sativa Indica Group BGIOSGA032709, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA032709-TA

Ensembl Protein ID

BGIOSGA032709-PA

Length

7056

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:7709244..7716299

Sequence Coding Region

7709244..7709411,7711208..7711303,7712349..7712461,7712584..7712650,7712752..7712844
,7713005..7713157,7713270..7713358,7713485..7713590,7713693..7713780
,7713890..7714008,7714141..7714302,7714432..7714628,7714744..7714832
,7714924..7715033,7715137..7715250,7715505..7715612,7715697..7716299

Genome Context

<gbrowseImage1> name=IndicaChromosome10:7709244..7716299 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:7709244..7716299 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGACCTGCCTCGTGGCGCTGCTGGTGGTGGTGCTCGCGGAGGCGGCCGGCGTGGGCGGCACCACCGTCGCCTACAATGACCGCAGCCTGGTGATCGACGGCGAGCGGCGCATCATCATTTCAGGATCTATCCATTACCCGAGGAGCACCCCGGAGATGTGGCCTGATCTGATTAAGAAAGCAAAGGAAGGTGGCCTTGACGCGATCGAGACCTACGTCTTCTGGAACGGCCATGAGCCCCATCGCCGCCAGTACAACTTTGAGGGGAACTATGACATTATCAGATTTTTCAAGGAGATCCAGAATGCTGGCTTATACGCTATTCTTCGCATCGGGCCATACATTTGCGGCGAATGGAACTATGGAGGACTTCCTGCTTGGCTACGTGATATTCCACAAATGCAGTTCAGAATGCATAATGCGCCATTTGAGAATGAGATGGAAAACTTCACGACTCTCATTATCAACAAGATGAAGGATGCCAACATGTTTGCTGGTCAAGGTGGCCCAATCATCCTGGCACAGATCGAAAACGAGTACGGAAATGTCATGGGCCAACTGAACAATAATCAGTCTGCGTCTGAATACATCCATTGGTGTGCGGACATGGCCAACAAGCAGAATGTCGGTGTCCCATGGATCATGTGTCAGCAAGACAGTGATGTGCCGCACAATGTGGTGAACACCTGCAACGGATTCTACTGCCATGATTGGTTCCCAAATAGGACTGGCATCCCTAAGATTTGGACAGAGAACTGGACTGGATGGTTTAAAGCCTGGGACAAGCCGGATTTCCATAGATCCGCCGAAGATATTGCTTTCGCAGTTGCAATGTTCTTCCAAAAGCGTGGTTCTCTCCAGAACTACTACATGTACCATGGTGGAACGAATTTTGGTCGCACCTCAGGTGGCCCGTACATCACAACTAGTTACGACTATGACGCACCTTTGGATGAATATGGTAATCTTCGGCAGCCGAAATATGGCCACTTGAAGGACCTCCACTCTGTGATCAAGTCCATTGAGAAGATTCTTGTCCATGGGGAATATGTTGACACCAACTACAGTGATAATGTCACAGTTACCAAGTACACCTTGGGCTCCACCTCAGCTTGTTTCATCAACAACCGGAATGACAACAAAGATCTTAACGTAACCCTTGATGGAAACACTCACCTTCTGCCTGCTTGGTCTGTGAGTATCTTGCCTGACTGCAAGACCGTTGCCTTCAATAGCGCCAAGATCAAAGCCCAAACGACTATCATGGTAAAGAAGGCTAACATGGTAGAGAAGGAGCCAGAGAACTTGAAATGGTCATGGATGCGTGAAAATTTGACGCCCTTCATGACTGATGAGAAGGGAAGCTATAGGAAGAATGAGCTCTTAGAGCAGATCGTCACATCAACCGATCAAAGTGATTACTTGTGGTACAGAACAAGCCTTGACCACAAGGGTGAGGCGAGCTACACTTTGTTCGTGAACACAACAGGGCATGAACTATATGCCTTTGTGAATGGAATGCTTGTTGGTAAAAACCATTCTCCAAATGGACACTTTGTTTTCCAGCTTGAGTCAGCAGTAAAGCTTCATGATGGAAAGAACTACATTTCTCTTTTGAGTGCTACCATTGGTCTAAAGAACTATGGCCCTTTGTTTGAGAAGATGCCTGCGGGCATTGTTGGAGGACCAGTTAAGTTGATTGACAACAATGGCACAGGGATTGATCTCTCCAACAGTTCCTGGTCATATAAGGCTGGCTTGGCAGGTGAGTATAGGCAGATCCACCTGGACAAGCCCGGTTACAGATGGGACAACAACAATGGCACCGTCCCTATCAACAGGCCCTTTACATGGTACAAGACTACCTTCCAAGCTCCAGCCGGTCAGGACACGGTGGTGGTGGACCTCCTAGGGCTGAACAAGGGCGTGGCATGGGTGAACGGGAACAACCTTGGCCGTTACTGGCCATCATATACAGCGGCGGAGATGGGTGGCTGCCATCACTGCGACTACCGCGGAGTTTTTCAGGCTGAGGGCGATGGACAAAAATGCCTCACGGGATGCGGTGAGCCGTCGCAACGGTACTATCATGTTCCACGCTCCTTCCTCAAGAATGGCGAGCCCAACACACTCATTCTCTTCGAGGAGGCCGGCGGCGACCCTTCACAGGTCATCTTCCACTCTGTCGTGGCAGGCTCTGTGTGCGTGTCCGCTGAGGTTGGGGATGCCATCACACTATCCTGCGGTCAACACAGCAAAACCATCTCGACCATCGACGTGACCAGCTTTGGTGTTGCGCGTGGCCAGTGCGGCGCCTATGAGGGTGGGTGCGAGTCCAAGGCTGCGTACAAGGCTTTCACAGAAGCTTGCCTTGGGAAGGAGTCATGCACAGTGCAAATCATTAATGCTCTCACCGGCTCCGGGTGCCTCTCCGGCGTCCTCACCGTCCAAGCCTCATGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAATCLVALLVVVLAEAAGVGGTTVAYNDRSLVIDGERRIIISGSIHYPRSTPEMWPDLIKKAKEGGLDAIETYVFWNGHEPHRRQYNFEGNYDIIRFFKEIQNAGLYAILRIGPYICGEWNYGGLPAWLRDIPQMQFRMHNAPFENEMENFTTLIINKMKDANMFAGQGGPIILAQIENEYGNVMGQLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDSDVPHNVVNTCNGFYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKDLHSVIKSIEKILVHGEYVDTNYSDNVTVTKYTLGSTSACFINNRNDNKDLNVTLDGNTHLLPAWSVSILPDCKTVAFNSAKIKAQTTIMVKKANMVEKEPENLKWSWMRENLTPFMTDEKGSYRKNELLEQIVTSTDQSDYLWYRTSLDHKGEASYTLFVNTTGHELYAFVNGMLVGKNHSPNGHFVFQLESAVKLHDGKNYISLLSATIGLKNYGPLFEKMPAGIVGGPVKLIDNNGTGIDLSNSSWSYKAGLAGEYRQIHLDKPGYRWDNNNGTVPINRPFTWYKTTFQAPAGQDTVVVDLLGLNKGVAWVNGNNLGRYWPSYTAAEMGGCHHCDYRGVFQAEGDGQKCLTGCGEPSQRYYHVPRSFLKNGEPNTLILFEEAGGDPSQVIFHSVVAGSVCVSAEVGDAITLSCGQHSKTISTIDVTSFGVARGQCGAYEGGCESKAAYKAFTEACLGKESCTVQIINALTGSGCLSGVLTVQASC</aaseq>

Gene Sequence

<dnaseqindica>1..168#1965..2060#3106..3218#3341..3407#3509..3601#3762..3914#4027..4115#4242..4347#4450..4537#4647..4765#4898..5059#5189..5385#5501..5589#5681..5790#5894..6007#6262..6369#6454..7056#ATGGCGGCGGCGGCGACCTGCCTCGTGGCGCTGCTGGTGGTGGTGCTCGCGGAGGCGGCCGGCGTGGGCGGCACCACCGTCGCCTACAATGACCGCAGCCTGGTGATCGACGGCGAGCGGCGCATCATCATTTCAGGATCTATCCATTACCCGAGGAGCACCCCGGAGGTATAATGAAAATTAGCTATGGATATATTGATCGCTATGCGCATGCATGCATGCATGCAAAAATACGTGTGATTGTGGTAGGTCTTAGCCGTCTTTTGATATTGCACGTACATGAGATGAGATTAGTACGTGCGATTTTGGTTTTGTTCTTCATATATATGCTATACACCAATCTCAAAGGATCACATAAAATCTAACAGTAGCCGTCATTTATATCTACTGTAATTATTTCTTATAGATCACATTTATATCTACTCTAGATGTCTACAAATTTATATTCTCTCAGTTTTTCTAGTCATACACCCGCGCACATCATTATTCTTTTTTTCACCAGTTGCTTGGCTCATAACATCGTTATACATATGGTCGAATATGACTAACAGTACGTATTTACTTAAGTAGATTAATCTTCGCATCATACTTTCACAGTACGTATAATATCCTACTAGCGATCGATCGACTATGATAGAATATATGACTAACAGTACGTATTTACTTAAGTAGATTAATCTTCGCATCGTACTTTCACAGTACGTATTAAGTACTGACATGAAGGTCAGTGTTAATTAGCTATACTTACAGGCTACTATATGTCGTATTAAATAGCCTAACCTCACCATCTATATTTTCATTGGTCTGTCGTATTTCAAGGCTAGCTAGTAAAAAACTCAGAAATCGTATTTTCTTCTGACCTCATATATATTTCATGAATCTCAGATACACACAAATGCCGGTATATATATATATATAACTTATATAGTTATACACTGGGAAGATGATCCCGGTGAGAAAAAAAATCATTCCGATATGTATACAATTAATAATGATAACTTTATTTTCAATTTAAATGGAAATTCTAGTTTTATATTTTGTTTTGTTAATGTGGTAGTTTTTAATTATAATTAAGATCTGCTCATGCTAATACTGGGCCTGCCCTGGGGCAGTGTGAGCGGTGCAATCGCACTGGGCCCCACGACTTCATGGGCCCCCGGGCCCCGGCCATGTACACAATAATACCTCTGCCTAGCCTGCACGGTCAATACAATTTACACATAAAGTAAAGCACAGATTATGTACAGGCACGTTAACGTTAGCAAAAACCAGGAAACCCATCAGTTCTTGCGCAGTTGCGCCGCTGCTCAGGAAACATCATCGCTCGGCGTTGAAACCATCTCCTTCCTCTCGAAGGCCTGGGCTCTCCTCTCAATTGGCAATCCTAATTAAGCAATTGGTCTCTCTGGGCTGCCATTAATTAATCTCATCCTGAAGCCTATGTTCTATTCTTATATTCTTAGTAGTATCTTGAACACAAAATTCAGATAGAACTTCACTAATTTCTTTTTGTTCTATAGCTACTAGAGTTGACTGGTTGAGATAGGAGCTTTAAGTGAATAGGTTCCTTCTCAGTTCTTACGATATGTACGTAGTTAATTAGTATCTCTACATCACAATCTTCTTGGTTGAGTCATTCCTCTTGCAGTCTTAACACTAACAGATGACGTGCTCTTTAATTTATAGGGGACATATAAGATATTATAAACTTAAATAGTTTCAATATTTGATGTATTCCTTGTATAGCGTTTATACTATTCAATTATCACCAAACGTTACTTTGTGCTTAATGATGTCTTAAAGTTCAACATTTTTTCCTATTTAAAATAAAAAAAATATTTTACATATATATTTACTAGCTACTAGTATTGTAGGGCCCTTTATTTTTGTCTCGTACTAGGCCCTCAAAATTTCATGACTAGCCAATGATACACGTATATTTATCATGTTTCCCTCTGGTGCAGATGTGGCCTGATCTGATTAAGAAAGCAAAGGAAGGTGGCCTTGACGCGATCGAGACCTACGTCTTCTGGAACGGCCATGAGCCCCATCGCCGCCAGGTTAGTTCTGTCTCCGATAAAATATGTATACTGCTTTAGCTGTTACTGCTATTTATTTAGTAAGTAATCGAATATGTAAATCCACAGTAAATATTTTACGATTTAAAACTAAGCTTATGTAATTCAAAGCAAGGCTGTTCCCCATGTATATACCCCATGTATATACGGAGGGAGTACTATTTATTTAGTAAGTAATCGAATATGTAAATCTACAGTAAATATTGATTAAAACTGAGCTTATGTAATTCAAAGCAAGGCTGTTCCCCATGTATATTATTTAGATGAATTAAGCTTAGTTTATACATCCTTATATTCCAGGCTGTTCCCCATGTATATTATTTAGATGAATTAAGCTTAGTTTATACATCCTTATATTCCTTGCGTATAGATCGCAGTATCGCTACTTGTAGCTTATTTTGCAAACCCGATTCGCTACTTGTAGCTTATTTTGCAAACCCGATTCTTGATATTTCTAACCAATGCATGAAACAAAGTAGTATAATCGAAATTCTTGATATTTCTAACCAATGCATGAAACAAAGTAGTATAATATATTCCATCTCCTACGATGGGTCATATAGAAGTGACTATATATTCAAACTAAGAATATATGACATCCCTTACGATGGGTCATATAGAAGTAACTATATATTCAAACTAAGAATATATGCCATGTCCTACGATGGGTCATATAGAAGTAACTATAGTTCAAACTAAGAATATATGCCATCTCCTACTATGTGTGCATTTTGAAAATTTTAGCCTATTCTAGCAATGTTCTTCTGATGACCTACGATGTGCATTTTGAAAAATTTTAGCATATTCTAGCAATGTTCTTCTCATGACCTTCGTGAAATGTTTTGATGTATATGTAGTACAACTTGCCTATTCTAGCAATGTTTCTCATGACCTTCGTGAAATGTTATATATATACATATATATATACATATATATATACATATATATATACATATATATATATATATATATATGTAGTACAACTTACTTCTCATGACCTTGGTGAAATGTTTTGATATATATGTAGTACAACTTTGAGGGGAACTATGACATTATCAGATTTTTCAAGGAGATCCAGAATGCTGGCTTATACGCTATTCTTCGCATCGGGCCATACATTTGCGGCGAATGGAACTATGGGTACATAACTGTATATGCTCAATTTTACACACGTTTGTGTGATAGATAAGGGAATGTTGAATACTATTTCACTAGCACACTGCACTAATCATACTTTTTTTAATCGTTTTCCTCATATGCAGAGGACTTCCTGCTTGGCTACGTGATATTCCACAAATGCAGTTCAGAATGCATAATGCGCCATTTGAGGTAATGGGTTATAATAATAAATTAATTCAAACATGTATATATTCATATATTATGTATAGCAATTGAAATTTTGAGCAATTGTTTTGTTTCCTACTGAATAGAATGAGATGGAAAACTTCACGACTCTCATTATCAACAAGATGAAGGATGCCAACATGTTTGCTGGTCAAGGTGGCCCAATCATCCTGGCACAGGTGTGATGCATGCTAGCACCCTCGATCTGTTGCCAATAATACAAGTTATTCAATTACAAATGCATTGCTTGTATCTTTATATATATATAGTACCGCTGATCTATTGCCAATAATTTAAGTTATTTAATACAAATGCATTGCTTGTATCTTTATATTATAGATCGAAAACGAGTACGGAAATGTCATGGGCCAACTGAACAATAATCAGTCTGCGTCTGAATACATCCATTGGTGTGCGGACATGGCCAACAAGCAGAATGTCGGTGTCCCATGGATCATGTGTCAGCAAGACAGTGATGTGCCGCACAATGTGGTGAGCATGACTTTCAATTTGTTTAAAATAATGTATAATGTTTGTATGTGTTTAAATTCTTTTATTGATTGTTTGAAATTCATGCCGTTGTTTCTTTTCCCGATTAATTTAGGTGAACACCTGCAACGGATTCTACTGCCATGATTGGTTCCCAAATAGGACTGGCATCCCTAAGATTTGGACAGAGAACTGGACTGGATGGTATATATATATTTATAATTTTCTTTCATCACATATATATGTTTCTCTTCTATTGTAAAAGAACTTTTTTAATATTCAAATATGAATTGAAGCATATCTTTTGTGACTTTCATTGATTCGGATTAGGTTTAAAGCCTGGGACAAGCCGGATTTCCATAGATCCGCCGAAGATATTGCTTTCGCAGTTGCAATGTTCTTCCAAAAGCGTGGTTCTCTCCAGAACTACTACATGGTATGTACTCTCAATTTTTTGTGGCTTTCTCACATATATATATATATATATATATCTCACAATGAATCGAACTAATTGTTGCCATCACACCATTTTTACCAGTACCATGGTGGAACGAATTTTGGTCGCACCTCAGGTGGCCCGTACATCACAACTAGTTACGACTATGACGCACCTTTGGATGAATATGGTGAGAAATTAACATACAACATTTTGGGCTATTTAATTATATGCACAATTAATAAGCTATAAATCATAGTATAATTTTGATTTTCCTTTGGTTTACCTATCATAATTAGGTAATCTTCGGCAGCCGAAATATGGCCACTTGAAGGACCTCCACTCTGTGATCAAGTCCATTGAGAAGATTCTTGTCCATGGGGAATATGTTGACACCAACTACAGTGATAATGTCACAGTATGATTCATGCCATACTTTCGCAGAATTTCCCTAATAGATTCAAGTTTTCTAGCAAACTGATACATGTGGTTCACATTGATAATTTCTTTTCAACATATCTGATGCATTATGATCACTTATTTTCTAAAGGTTACCAAGTACACCTTGGGCTCCACCTCAGCTTGTTTCATCAACAACCGGAATGACAACAAAGATCTTAACGTAACCCTTGATGGAAACACTCACCTTCTGCCTGCTTGGTCTGTGAGTATCTTGCCTGACTGCAAGACCGTTGCCTTCAATAGCGCCAAGGTATTTTTCCAATCATTATTGAATTCTGACTATATAATTTGATTGATGCAGGATCTATGATACTACACTATTGTTACAAGCTAATTGTTAAGATTGTTTTTTCTTTCGTTTTTTTTTTGGAACAATTAGATCAAAGCCCAAACGACTATCATGGTAAAGAAGGCTAACATGGTAGAGAAGGAGCCAGAGAACTTGAAATGGTCATGGATGCGTGAAAATTTGACGCCCTTCATGACTGATGAGAAGGGAAGCTATAGGAAGAATGAGCTCTTAGAGCAGATCGTCACATCAACCGATCAAAGTGATTACTTGTGGTACAGAACAAGGTATTGGCCAAAAAAACATTTTTATTGCAACTTTTACATGATAAGAAGCATTTTTAATGTTAACTTATTATTGAATAATATGCTGCCTAATTTTGACACATAAAATGAAATGCAGCCTTGACCACAAGGGTGAGGCGAGCTACACTTTGTTCGTGAACACAACAGGGCATGAACTATATGCCTTTGTGAATGGAATGCTTGTTGGTAAGTAGCTAGTTAAATTTAGCTTCTTGCACAACATAACAATTCGTGGTAATTTTCTCATTGAGATGTTAACTATCAATCTGGTTGGCAGGTAAAAACCATTCTCCAAATGGACACTTTGTTTTCCAGCTTGAGTCAGCAGTAAAGCTTCATGATGGAAAGAACTACATTTCTCTTTTGAGTGCTACCATTGGTCTAAAGGTTTCTAATATATTTACTAAACAGTTCATTAAAAGCCTGTCACTATATTTTTTGTATATGTGTTGTTGTGTATGATGAAAGATATTTGTTCAATGTCAAACAGAACTATGGCCCTTTGTTTGAGAAGATGCCTGCGGGCATTGTTGGAGGACCAGTTAAGTTGATTGACAACAATGGCACAGGGATTGATCTCTCCAACAGTTCCTGGTCATATAAGGTGCACAAAATCTCTATCAATTGTCAATTATTACTATTTAATTATCAACTATATTTCTATGGATATTTTTAAGACTTTTGATGACGTATGTTATTAGGAAATATACCAGCAAATTTTTCCCTTGATTCAATAGATTGTTTAGATTAATTAATACTCGTCATCTTACCACTTTAGTTACCTCCTAAGAGATAAGTGGAGCACCCTAAATATATGTTTCTATTGATTGTAATATTACTTTGATTTTCTATTTCTAGGCTGGCTTGGCAGGTGAGTATAGGCAGATCCACCTGGACAAGCCCGGTTACAGATGGGACAACAACAATGGCACCGTCCCTATCAACAGGCCCTTTACATGGTACAAGGTATTATATAGGTTGATATGTATTATCCATATTGTATTGAGCTACGAAATAGAAGTAATTCCCTTGTTTTATTTTTCTATTTAGACTACCTTCCAAGCTCCAGCCGGTCAGGACACGGTGGTGGTGGACCTCCTAGGGCTGAACAAGGGCGTGGCATGGGTGAACGGGAACAACCTTGGCCGTTACTGGCCATCATATACAGCGGCGGAGATGGGTGGCTGCCATCACTGCGACTACCGCGGAGTTTTTCAGGCTGAGGGCGATGGACAAAAATGCCTCACGGGATGCGGTGAGCCGTCGCAACGGTACTATCATGTTCCACGCTCCTTCCTCAAGAATGGCGAGCCCAACACACTCATTCTCTTCGAGGAGGCCGGCGGCGACCCTTCACAGGTCATCTTCCACTCTGTCGTGGCAGGCTCTGTGTGCGTGTCCGCTGAGGTTGGGGATGCCATCACACTATCCTGCGGTCAACACAGCAAAACCATCTCGACCATCGACGTGACCAGCTTTGGTGTTGCGCGTGGCCAGTGCGGCGCCTATGAGGGTGGGTGCGAGTCCAAGGCTGCGTACAAGGCTTTCACAGAAGCTTGCCTTGGGAAGGAGTCATGCACAGTGCAAATCATTAATGCTCTCACCGGCTCCGGGTGCCTCTCCGGCGTCCTCACCGTCCAAGCCTCATGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032709