BGIOSGA032853

From RiceWiki
Revision as of 05:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032853| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032853, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032853

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032853, complete gene.

LocusTag

OSJNBA0011L09.26

Ensembl Transcript ID

BGIOSGA032853-TA

Ensembl Protein ID

BGIOSGA032853-PA

Length

3576

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11451952..11455527

Sequence Coding Region

11451952..11452246,11452571..11452786,11454096..11454247,11454335..11454611,11455235..11455527

Genome Context

<gbrowseImage1> name=IndicaChromosome10:11451952..11455527 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:11451952..11455527 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTGCTCCAACGCCTCCTCGTCGCGCTCCTCCGCGTCCTCGTCGCCGGAGAGCACGCCGCCGGCGACGCCATGCCGTCGCCGGCGTCCGGCGGCGGTGGCGCCGCCGTTAACGTTGAAGCGCGGTACGCGCGCGTGTTCTGCTTCGGCAACTCGCTCACCGACACCGGCAACAACCCCCTCCTCCCGGCCACCGCCGGCGGGCCGTCCACCAGCCCGCCGTACGGGATGACCTTCTTCCACCGCCCCACCGGCCGCTCCTCCGACGGCCGCCTCCTCATCGACTTCATCGTGAAGGCGCTGAGGGCGCCGCAGCCGACGCCGTACCTCGCCGGCAAGACAGCGGCGGACTTGTTGGCCGGGGCGAACTTCGCGGTGGGCGGCGCGACGGCGCTCGAGCCGGCGGTGCTCGAGAGCAGGGGCATCGTGTCGGTGGTTCCGGTGTCTCTGAGCAACGAGACGCGCTGGTTCAAGGATACCTTACAGCTTCTTGCTTCCACCACCAACGCGAGGCGCAGGATCGCCGAGACGTCGCTCTTCTTCTTCGGAGAGATCGGAGTCAACGACTACTTCCTCGCCTTGGCTAGCAACCACACCGTCGAACAGGCGGCGGCGACCTTGGTCCCAGACATCGTCGGCGTCATCCGATCAGCCGTGATCGACGCCATCGTCGCCGGAGCAAGAACGGTGGTGGTCACCGGGATGATACCGCTGGGCTGCGAGCCGCAGCTGCTCGCCCTGTTCCCCGCGGCCTCCGCCGCCGACTACGACCCGGACACCGGCTGCGACGCACGGTTCAACGAGCTCGCCGAGGTGCACAACCGCGAGCTGATCCGGATGCTCCGGCGGCTCCGGCGCGCGTTCCCTGCCGTCGCCGTCCACTACGCCGACTTCTACCGCCCCGTCACCGCCATCATCGCCTCTCCGGCCAAATACGGTTTCGGCGACACGCCGTTGGCGGCGTGCTGTGGCGGCGGCAACGCCTACAACTTCGACTTCGCGGCGTTCTGCACCTTGCCGGCGTCGACGGTGTGCGCCGACCCATCCAAGTACGTCTCCTGGGACGGGATCCATTACACGGAGGCGGTGAACAAGTTCGTGGCTCGTTCCATGCTAAGGGGAGTCCTACCGATGCCCAATCCAATTCCCAGCCCGTCCTTGTCCATTCCGTTATCAAGTTCACATGAACATACAGGACAAGAAACCAGCCGGGAGCTCGCTACACTATGA</cdnaseq>

Protein Sequence

<aaseq>MALLQRLLVALLRVLVAGEHAAGDAMPSPASGGGGAAVNVEARYARVFCFGNSLTDTGNNPLLPATAGGPSTSPPYGMTFFHRPTGRSSDGRLLIDFIVKALRAPQPTPYLAGKTAADLLAGANFAVGGATALEPAVLESRGIVSVVPVSLSNETRWFKDTLQLLASTTNARRRIAETSLFFFGEIGVNDYFLALASNHTVEQAAATLVPDIVGVIRSAVIDAIVAGARTVVVTGMIPLGCEPQLLALFPAASAADYDPDTGCDARFNELAEVHNRELIRMLRRLRRAFPAVAVHYADFYRPVTAIIASPAKYGFGDTPLAACCGGGNAYNFDFAAFCTLPASTVCADPSKYVSWDGIHYTEAVNKFVARSMLRGVLPMPNPIPSPSLSIPLSSSHEHTGQETSRELATL</aaseq>

Gene Sequence

<dnaseqindica>1..295#620..835#2145..2296#2384..2660#3284..3576#ATGGCGCTGCTCCAACGCCTCCTCGTCGCGCTCCTCCGCGTCCTCGTCGCCGGAGAGCACGCCGCCGGCGACGCCATGCCGTCGCCGGCGTCCGGCGGCGGTGGCGCCGCCGTTAACGTTGAAGCGCGGTACGCGCGCGTGTTCTGCTTCGGCAACTCGCTCACCGACACCGGCAACAACCCCCTCCTCCCGGCCACCGCCGGCGGGCCGTCCACCAGCCCGCCGTACGGGATGACCTTCTTCCACCGCCCCACCGGCCGCTCCTCCGACGGCCGCCTCCTCATCGACTTCATCGGTACATCATTTCATCAAGAAATTAATCAAACCAGCTAGCTAGCTAGCATAGCATATCTATAATCTAATTAATTAATCTAGCTAGATGTATACTCCCTTCATCTCGAATATATAATGTTTAATCATTCATCTTATTAAAAAATATATAAATATTATTTGATTTATTGGGCACTTATTTTATCACAATTAAAGTAGAATCTTAATATCTACTTTTACATATTTATATTATTTTTTTAAATGAGACGAATGGTCAAACGTGGTGCGAGAAATCAACGGCGCCGTTATACATTTGTGATATCCATGGCGTCGGGGGTTGTTTTTGCAGTGAAGGCGCTGAGGGCGCCGCAGCCGACGCCGTACCTCGCCGGCAAGACAGCGGCGGACTTGTTGGCCGGGGCGAACTTCGCGGTGGGCGGCGCGACGGCGCTCGAGCCGGCGGTGCTCGAGAGCAGGGGCATCGTGTCGGTGGTTCCGGTGTCTCTGAGCAACGAGACGCGCTGGTTCAAGGATACCTTACAGCTTCTTGCTTCCACCACCAACGGTAAAAGACTACAAGCGACGGAAATAAGCTGGTTTTTTTATATAAAAAGAAAACTGTTATAGACACGTGCGTTATAGGAATATAATTAACTATTTTGCCACTAATTTACCACTAGACCCACATGTTATAAACACATGAGGACCATATGTTATAAATACGTGAGTACCCACATGCCATAGAGTACGAGTGGCAAATTAATCCTTAATTGGCATATGTTAAAAGTGGCAAAAAGAGTTTATTGGTTTTTCTTAAATCAGTATTTATAATACAAAAGCAGTTTTTTTAAGTGGGAGTGGAGGGGAATGGAAAGATCAGGACGACTACCTCTTTTAAGTAGCAGAGAAATAATGGCATCATTTTTTTTCCCTGTAATAGGCGACCTACCTAAATAAAAATAAAGGTAAATGTTTTATGCTCCTATTTTAGCCGACCAAAAGGTAAGGTCGAAAAACTGAAAACAATTAAAAAAGCATAAATCAACTCTACAAATAAGCAGTAAAGTTCAAATTTGTCTATAGCTTACAAGTCAACGAGCAGCCAAGAAAGCAAAGTATGTCAAAGAGGGGAAGATTTGAACTGATGGATGTAATAATGCATCCCACAACTTTACCACCATAACAAAGGGGCATGACTCGTTGTGACGGAGCTATTTTAACTGTAAGACAATGGGGGAATTTACTATTTGCCACTCTCTTAAAATGCCAGTGCTCAAATGCCACTCTCCTAAATTTTCATTCCCAAATGCCACTCGGGCCCACATGTCAGCCTCACTCATCATCGGGTCCCGCATCACTTTTGTTTGAATGGAGAGTGAGGCTGACATGTGGCCCCGGGTGGCATTTGGGAATGAAAATTTGGGAGAGTGGCATTTGAGCACTGGCATTTTGAGAGAGTGGCAAATAGTAAATTCTCCCGTAAGAGACAATACTTGATTCTAAAACGAGACGTTGCCTCACTTAATTTGGGTAAGATTTGATAAAGTCATTAGCAAAGAAGTTCCCGGGATTGAGCAAAATTTTAAAAATATATAAAAGTTTTACAAAATTTTCCCTTTACTATTAAAAAAATTATAGTGTACAATGCTTAAAAGTTAACCATGCCATATATTAAAACCAGAGGAAGTGTAGTGTACAATGTTTCGCAACATAAATGAATATGCTCTATAAAAATTAATTAACAACCTAGAGGGTAGATCACAATTAAACTGAACCCCACTAGACAGCTAAAATATTTCTGAATCCTTTGTAATCCATTCTTTTGCAACTGCCTGATCTTGTGAATAATTGTGATGCATATGCGCACTCTACAGCGAGGCGCAGGATCGCCGAGACGTCGCTCTTCTTCTTCGGAGAGATCGGAGTCAACGACTACTTCCTCGCCTTGGCTAGCAACCACACCGTCGAACAGGCGGCGGCGACCTTGGTCCCAGACATCGTCGGCGTCATCCGATCAGCCGTGATCGTAAGATCGAAAACACACTTCTCCCTAACTTGCATCCTAAGATCGCTGGAAATCGTCAATTGACTATATATATCTAATCGCCCGTAGGACGCCATCGTCGCCGGAGCAAGAACGGTGGTGGTCACCGGGATGATACCGCTGGGCTGCGAGCCGCAGCTGCTCGCCCTGTTCCCCGCGGCCTCCGCCGCCGACTACGACCCGGACACCGGCTGCGACGCACGGTTCAACGAGCTCGCCGAGGTGCACAACCGCGAGCTGATCCGGATGCTCCGGCGGCTCCGGCGCGCGTTCCCTGCCGTCGCCGTCCACTACGCCGACTTCTACCGCCCCGTCACCGCCATCATCGCCTCTCCGGCCAAATACGGTACGGTCCATGGATGTAGGGGCGGATCTATAATAAATTTTGAGGGGGACTTATCTTCTTCTCCCTCGTTCAACCCCCTTTAATTTTATTCCTCTTCTCCCTTCTCTTCTCACTTCCTTCTCTCCTTCTATCAATGAGGATCCAGAGTTCCCCCTACCCCGCTGGATCCTCATTGATGCATGCTGACACGCTGTTGATTCGTCCCTACCCCTAGTACCCACACTAGATCCGTCCCTGTATAGATGCATGCTGACACGCTGTTGATTCGTGCACACATGAGGTGTTATAGAACGGGCACATATGATGTGTTATACGTGCCGCCGGCTCTAAATATGTCGGTCAGAAAATCTCTTTGCCGACCAGACTTCTTTGGACCGTTCAAGTTGGTCAACAATTTTTTTTTTGTCGATCAACCGCATGCCTCTAAATGTGGTCTTTACCAACCGAGATCATCTGTTAGAGATTTTGTGTCATAGTGTAGTGAAGGGTTGGGTGGGCCAGAAATATCTCATGCGTCGAGTTTATAATTAAGAGCCGGTACATATAAGACGTAACCTACTTGGATATCTCTATACTACTGACATATAATCATGTGGTATGGTGGCATATATATATGCATGCAGGTTTCGGCGACACGCCGTTGGCGGCGTGCTGTGGCGGCGGCAACGCCTACAACTTCGACTTCGCGGCGTTCTGCACCTTGCCGGCGTCGACGGTGTGCGCCGACCCATCCAAGTACGTCTCCTGGGACGGGATCCATTACACGGAGGCGGTGAACAAGTTCGTGGCTCGTTCCATGCTAAGGGGAGTCCTACCGATGCCCAATCCAATTCCCAGCCCGTCCTTGTCCATTCCGTTATCAAGTTCACATGAACATACAGGACAAGAAACCAGCCGGGAGCTCGCTACACTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032853