BGIOSGA032940

From RiceWiki
Revision as of 05:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA032940| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA032940, complete gene.| tag = OS10G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA032940

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032940, complete gene.

LocusTag

OS10G0422500

Ensembl Transcript ID

BGIOSGA032940-TA

Ensembl Protein ID

BGIOSGA032940-PA

Length

3612

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13306667..13310278

Sequence Coding Region

13306667..13306693,13306848..13306947,13307309..13307386,13307572..13307659,13307768..13307872
,13308230..13308772,13308925..13309060,13309199..13309389,13309488..13309596
,13309810..13309958,13310032..13310278

Genome Context

<gbrowseImage1> name=IndicaChromosome10:13306667..13310278 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:13306667..13310278 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGAGATGGCGCCAAGAAGAGCAAGCTGTCATGGTCCAAGAGCCTTGTGCTGAAGTGGTTCAACATCAGGGGGAAGTCCTATGACTTCCATGGCGATGATGCAGCTGCTGCATTTGGGAGGAGAGGAGGAGGAGGAGAGGATGAGTGGAGGAGCAGCAGCTTTTCCAGGAGGGAATCCTGCACGGTCAAGAAGAGCAGGACAGAGAGGGCGTCGCGGCGGAGCCACGAGCGGTCTCGCCGGAGCAAGATCGACCTCGACGCCGCGGAGGCCACCGTCACGTTGGACTACAGGATCTTCGTTGCCACGTGGAACGTGGGCGGCCGCGCGCCGCCGGGGTCGCTGAGCCTCGACGACTGGCTCCGCACCTCGCCGCCGGCCGACATCTACGTCCTCGGGTTCCAGGAGATCGTGCCGTTGAACGCCGGCAACGTGCTCGGCGCGGAGGACAATGGCCCGGCGAGGAAGTGGGTGTCGCTGGTGCGGCGGACGCTGAACAGCCTCGCGGGCACGGGCGGTGGCGGCGGAGGCGGAGGTGGCGGGGGCATGAGGACGCCGTCGCCGGCGCCGGACCCGGTGGTGGAGATGGACGACGACTTCGAGGGGTCGTCGTCGAGGCAGAACAACCCGGCGGCGTTCTTCCACCGCCGCTCGTTCAACGCCGGGCTCAGCCGGAGCCTCCGGATGGACGGCGACATCCTCGGCGGCGGCGGCGGCGCGCAGCCGAGGCTGGAGCGCCGGTACAGCGTCAACGACCGCGTCATGTACGGCAGCCGGCCGAGCGACTACGAGGCCAACTGCCGGTGGGGCCACCCGTCGGACGACGGCGAGATCGACGACGGCGGCGGCGAGTCGCCAAGCGCGGTGTTCTCGCCGATGTCGTACGGATACGGCGCGCCGCCGTACATGGAAGAGAGCAATGGCGGCGCCGCCCATTCTAGGTACTGCTTGGTTGCGAGCAAGCAAATGGTTGGATTGTTCCTGATGGTTTGGGCTAGGAGAGAAATAAAAAGTGACATAAGAAATCTCAAGGTGTCTTGTGTAGGGAGAGGATTGATGGGCTATCTTGGAAATAAGGGTTCGATTTCGGTTAGCATGTTGTTGCACCAAACAAGCTTCTGCTTCGTCTGTAGTCACCTCACATCGGGGCAGAAGGATGGTGATGAGCACCGCAGAAACTCCGATGTGATGGAAATTTTGAGAAAAACCAGGTTCCCAATGGTTTATGGACAGTATGAGAGATCACCAGAGACTATTTTGGAGCATGATCGGATCATTTGGCTTGGGGACCTAAATTATCGGATAGCGCTTTCCTACCGATCGGTGAAGGCTCTTGTGGAGATGCGCAATTGGAAAGCGTTGCTTGAGAAAGATCAGCTGAGGAGCGAGCAAAGAGGCGGCCGCGTATTTCCTGGTTGGAATGAGGGGAGGATATATTTTCCTCCTACTTACAAATACTCAAATAATTCCGACAGATATGCAGGGGATGACATGAACCAGAAAGAAAAGAGGAGAACTCCAGCATGGTGCGACCGCATTTTATGGTATGGAAGGGGTCTTAGCCAACTCTCATATGTTCGAGGAGAGTCCCGCTTCTCGGATCATAGGCCTGTCTACAGCATGTTTAGTGCAGAAGTAGAATCGATCAATCACAGCCGAATTCAGAAAATGAGTTGTTCAAGCTCGCAATTGGACATCGAAGAATTGCTGCCCTACTCATATGGTTACACCGATATCAACCCATATGGATACACCGACCTCAACTTCTATTGA</cdnaseq>

Protein Sequence

<aaseq>MRDGAKKSKLSWSKSLVLKWFNIRGKSYDFHGDDAAAAFGRRGGGGEDEWRSSSFSRRESCTVKKSRTERASRRSHERSRRSKIDLDAAEATVTLDYRIFVATWNVGGRAPPGSLSLDDWLRTSPPADIYVLGFQEIVPLNAGNVLGAEDNGPARKWVSLVRRTLNSLAGTGGGGGGGGGGGMRTPSPAPDPVVEMDDDFEGSSSRQNNPAAFFHRRSFNAGLSRSLRMDGDILGGGGGAQPRLERRYSVNDRVMYGSRPSDYEANCRWGHPSDDGEIDDGGGESPSAVFSPMSYGYGAPPYMEESNGGAAHSRYCLVASKQMVGLFLMVWARREIKSDIRNLKVSCVGRGLMGYLGNKGSISVSMLLHQTSFCFVCSHLTSGQKDGDEHRRNSDVMEILRKTRFPMVYGQYERSPETILEHDRIIWLGDLNYRIALSYRSVKALVEMRNWKALLEKDQLRSEQRGGRVFPGWNEGRIYFPPTYKYSNNSDRYAGDDMNQKEKRRTPAWCDRILWYGRGLSQLSYVRGESRFSDHRPVYSMFSAEVESINHSRIQKMSCSSSQLDIEELLPYSYGYTDINPYGYTDLNFY</aaseq>

Gene Sequence

<dnaseqindica>1..27#182..281#643..720#906..993#1102..1206#1564..2106#2259..2394#2533..2723#2822..2930#3144..3292#3366..3612#ATGAGAGATGGCGCCAAGAAGAGCAAGGTGAGTTTCTTTGCTGTTGTTAATTCTTGCTTTCTCTGATGATCTGATCTTCAGACATTGCAAAGAGGCAGATTTTCTTCTTGTTTTTTTTTGGTACCAAATCTTCTCCAACTTCTTGTTGTTGTTGTTGATGATGATGATGATGCTGATGCAGCTGTCATGGTCCAAGAGCCTTGTGCTGAAGTGGTTCAACATCAGGGGGAAGTCCTATGACTTCCATGGCGATGATGCAGCTGCTGCATTTGGGAGGAGAGGTGAGTGAGTGAGTGAGCCTGATGAACTCTGAACAGTAGCTAGCCACGCCCCTCTCTCTCTCACTGACAGAGTGTGTCTAGCTGTGGGGCCCACACTGCCACCCCCATGGGCCATGGCTACTACTACTACTCCAACTCTCCTACCTCCTGTCTGCCTCTTGGAGATCAGATCACTCTTTTGTTTTGTTTTCTTGCACTGCTGCTGCTGCTGGTCAAAGGACCCAGCTTTTTCAGTTCTTTTTTCTTTCTTTTGGGTTGGTTTGTGATGGATGGCATGGTGATCCAAATTTGCTGAGACATTCGGGCATTTTGATTGTTTTTTTTTGTTCTCTGATGATGAGAATAATCTGAACTGGAGCAGGAGGAGGAGGAGAGGATGAGTGGAGGAGCAGCAGCTTTTCCAGGAGGGAATCCTGCACGGTCAAGAAGAGCAGGACAGGTGATTCTATTCTAGTACCAATCTGACCGAATTTTTTTATTTTTTTTTAAAAATTCGAGTTTTCATATGATTCTGGTTCAATTGGTACCTAGAGTCTGCAAGTGCACGAGAAAGAAGAAAAGAAAACCCCCAGATTTTTATATGATTATGATTGAAGAAAAAAAAATAATTTCGAATTGTTGCAGAGAGGGCGTCGCGGCGGAGCCACGAGCGGTCTCGCCGGAGCAAGATCGACCTCGACGCCGCGGAGGCCACCGTCACGTTGGACTACAGGTGCGCGTGTGTGCATATCTCCGGCGATCGCCGCCATTTCTGCTGCACCGATCTCCATTGATCCGTAACAATGTCGTCGTCGTCCTCGTTGTTTCTTGCGTTATGTAGGATCTTCGTTGCCACGTGGAACGTGGGCGGCCGCGCGCCGCCGGGGTCGCTGAGCCTCGACGACTGGCTCCGCACCTCGCCGCCGGCCGACATCTACGTCCTCGGGTACGTACACGCCGCCGCCTCTCGCCATTGCCGTTGAAACGTAGCGTTGGAATATAAACTGAATTGCTCGTTTATTTCTCATCAGTTTAAGTTTTTGAATTGAACTAGTGAGTGTATACAACTTACAGTCTCATCTTTTAGCTTATGCTGATTTTGAAGTTTTTTTTATCGTAGTTTATTTTTTATCCTTCGCTTTTAGATCGCTAATAACACGTATATAAAAATTTTATTTACAAATTATTTTACGTTAATAAATATATCATTTCGCTTAATCTGTCAATAAGTTAAACGATGGCCTCCTTAATATGGTCAGAGCTTGGATTGAACTGGTCGATAAATGCAACTCAATACGTGTAGGTTCCAGGAGATCGTGCCGTTGAACGCCGGCAACGTGCTCGGCGCGGAGGACAATGGCCCGGCGAGGAAGTGGGTGTCGCTGGTGCGGCGGACGCTGAACAGCCTCGCGGGCACGGGCGGTGGCGGCGGAGGCGGAGGTGGCGGGGGCATGAGGACGCCGTCGCCGGCGCCGGACCCGGTGGTGGAGATGGACGACGACTTCGAGGGGTCGTCGTCGAGGCAGAACAACCCGGCGGCGTTCTTCCACCGCCGCTCGTTCAACGCCGGGCTCAGCCGGAGCCTCCGGATGGACGGCGACATCCTCGGCGGCGGCGGCGGCGCGCAGCCGAGGCTGGAGCGCCGGTACAGCGTCAACGACCGCGTCATGTACGGCAGCCGGCCGAGCGACTACGAGGCCAACTGCCGGTGGGGCCACCCGTCGGACGACGGCGAGATCGACGACGGCGGCGGCGAGTCGCCAAGCGCGGTGTTCTCGCCGATGTCGTACGGATACGGCGCGCCGCCGTACATGGAAGAGAGCAATGGCGGCGCCGCCCATTCTAGGTGACCACCATTTCTTGGCTTTGGATCTTGAAATTTCAGCCTTTCATCAGGATAATTAAGCTTGATTTCATGGAATTATCCCGAATTTACAGTAGTTTTGATGAGATTTAATTAGGATTTTTATTTTCTAAATAAAATTTGAGGTGATTTAGGTACTGCTTGGTTGCGAGCAAGCAAATGGTTGGATTGTTCCTGATGGTTTGGGCTAGGAGAGAAATAAAAAGTGACATAAGAAATCTCAAGGTGTCTTGTGTAGGGAGAGGATTGATGGGCTATCTTGGAAATAAGGTAACTTATGTTAAAATAATCTGTTGTGATTTTTGGTGTTATATTCCTATCTTATTGCCATTATTGAATTTGAAGAAAAAAGAGTAAGAAATTGTGTTTCAGAAGCTTTGTAAACCAATGAGAAGTTTTTTTTCCCAGGGTTCGATTTCGGTTAGCATGTTGTTGCACCAAACAAGCTTCTGCTTCGTCTGTAGTCACCTCACATCGGGGCAGAAGGATGGTGATGAGCACCGCAGAAACTCCGATGTGATGGAAATTTTGAGAAAAACCAGGTTCCCAATGGTTTATGGACAGTATGAGAGATCACCAGAGACTATTTTGGAGCATGAGTAAGCAAAACACCTTAGCATCCCTCAACTCTTGTAAATTAAAAACTTGCAATCACAAATATTGTGTAATATATCCTTCACCTTCGCCATTTTCTTAGTCGGATCATTTGGCTTGGGGACCTAAATTATCGGATAGCGCTTTCCTACCGATCGGTGAAGGCTCTTGTGGAGATGCGCAATTGGAAAGCGTTGCTTGAGAAAGATCAGGTATGAGCTTAGCAACAAACTTTGAAAGACACAATGCAGATCTCCAATAGTGGTAAAATTCTTCCAATAGTAGTTTGCTTGTGACAGAGGCAATCATTGCTTTATATCCTGTCATTCTTTTGCTTTGGTGACGTTACAAGACTTCATTAGTTTGGCAAAACAGAAGGCCAAGAATAATTGTGATGAGAAGGCATGAATTGCTTATACTTTCAGCTGAGGAGCGAGCAAAGAGGCGGCCGCGTATTTCCTGGTTGGAATGAGGGGAGGATATATTTTCCTCCTACTTACAAATACTCAAATAATTCCGACAGATATGCAGGGGATGACATGAACCAGAAAGAAAAGAGGAGAACTCCAGCATGGTAAGTAAAGCACATTGCCAGATTTTTGCCATATTTCGTACAGTTCAGCAATTTCAGTGATCTTGTTTTACAGGTGCGACCGCATTTTATGGTATGGAAGGGGTCTTAGCCAACTCTCATATGTTCGAGGAGAGTCCCGCTTCTCGGATCATAGGCCTGTCTACAGCATGTTTAGTGCAGAAGTAGAATCGATCAATCACAGCCGAATTCAGAAAATGAGTTGTTCAAGCTCGCAATTGGACATCGAAGAATTGCTGCCCTACTCATATGGTTACACCGATATCAACCCATATGGATACACCGACCTCAACTTCTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032940