BGIOSGA033080

From RiceWiki
Revision as of 05:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033080| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033080, complete gene.| tag = OsI_338...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033080

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033080, complete gene.

LocusTag

OsI_33894

Ensembl Transcript ID

BGIOSGA033080-TA

Ensembl Protein ID

BGIOSGA033080-PA

Length

3440

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15407734..15411173

Sequence Coding Region

15407734..15408916,15410057..15410097,15411069..15411173

Genome Context

<gbrowseImage1> name=IndicaChromosome10:15407734..15411173 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:15407734..15411173 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCCCAAGGCCATCGCCGTCGACGGCGACCTCTTCCTCTTCCGCATCCCGATCGACCGCGTCGGCACCATGTCCCTCACCCACAACGACTACTTCGTCTACATGGCGCGGTCTCCCCCTCACCGCCCGAGACTGGATCTGCTCCCGAACCCGTCGCACGATACCCTGGGAGACAAGGAGATCGCCATACTGAGCTGTGCCGATGGCGGCGAGCAGTACGTGGTGACCGCCCTCAGGACCATCCCCGGCAGTAAAACCATCCACAGGCTGCATCTGTACCGCTCCAAACCGAACGGCGAGCAAGGGAGATGGACTTCGCAGATGGTGTCTGTGGAGGGACCACTGATGAGGGACTTGGTGTGCCCCATCCCTGAGACGGTGCACAGGCAAGTGCACCACGTGACGAGCAAGGTGATCAGGCTGGGAACAGGTGCAAATGGCATGGTAGGGTGGGTGGATATCTGGCGCGGCATCCTCCTCTGCGACGTGCTCCAGGAGAGCCCCAAGCTCCATGACATGCCGCTGCCTCTGCCGGCCAAGAGCAACAGCCACAGGGCCTTCCTCAACACCACCGACCAGTACTGCGGCGACGTCGCCGTCAGCCGAGACAAGAGCTTCATCAAGTACGTCGAGATGGAGATCGTCACGCCCAAGATCGTGAGCGCCACGCCACCAGGTGACTGTGATCCTGACCCGTTCCTCGAATGGCTGCGCCGTCGAGAATGCAAGGACCTGAAACGCACCTTGGTCCATGGCCGCTGGAAGGCCACCACATGGAGGATGCCGATCCCGGTCACCTCATGGGACGATTGGTGCCGCGACTGCGCTGTTGAATCTGCCGAGCTCAGCACTGACAACCCAAAGGCTTATGAGTTGCTGTGTGCTGTGAGCAAAGAAAGTCTTAAAGAGGATGATGATGATAAGGCCATGGAGGCGGCAACGACAACCACGACGAGGTTGCCATTGGGACGCCTGGGCATGGCTTACCCTGCCATGAGCATCGATGACGATGTCATTTACGTGCTGACAAAACCCGTCATGGGGAATGGCAAGGCGGCATTTCTGACTGCTGTTGATGTGAGGAGGAAGAAGGTGCTGGCAGTGGCCAAGCTTGATAGCGCCGTTTTCATGCGTTACTACCTTGCCGTTGGGATCTCCAAACATTTTTTCAGCGCTCCAGATTTAGGGCCTGATCCATATGACAGTTCTTGCTTTTGGATGGTACAAGAGAATCACTTGGACAAGCTGAAGATCATGGGCAGAAGTCAGCAAGAAGAAGAAGAAGAAGACGTGGAAAGCGGCAAGAGTGATGCTGTCCAGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MVPKAIAVDGDLFLFRIPIDRVGTMSLTHNDYFVYMARSPPHRPRLDLLPNPSHDTLGDKEIAILSCADGGEQYVVTALRTIPGSKTIHRLHLYRSKPNGEQGRWTSQMVSVEGPLMRDLVCPIPETVHRQVHHVTSKVIRLGTGANGMVGWVDIWRGILLCDVLQESPKLHDMPLPLPAKSNSHRAFLNTTDQYCGDVAVSRDKSFIKYVEMEIVTPKIVSATPPGDCDPDPFLEWLRRRECKDLKRTLVHGRWKATTWRMPIPVTSWDDWCRDCAVESAELSTDNPKAYELLCAVSKESLKEDDDDKAMEAATTTTTRLPLGRLGMAYPAMSIDDDVIYVLTKPVMGNGKAAFLTAVDVRRKKVLAVAKLDSAVFMRYYLAVGISKHFFSAPDLGPDPYDSSCFWMVQENHLDKLKIMGRSQQEEEEEDVESGKSDAVQQ</aaseq>

Gene Sequence

<dnaseqindica>1..1183#2324..2364#3336..3440#ATGGTGCCCAAGGCCATCGCCGTCGACGGCGACCTCTTCCTCTTCCGCATCCCGATCGACCGCGTCGGCACCATGTCCCTCACCCACAACGACTACTTCGTCTACATGGCGCGGTCTCCCCCTCACCGCCCGAGACTGGATCTGCTCCCGAACCCGTCGCACGATACCCTGGGAGACAAGGAGATCGCCATACTGAGCTGTGCCGATGGCGGCGAGCAGTACGTGGTGACCGCCCTCAGGACCATCCCCGGCAGTAAAACCATCCACAGGCTGCATCTGTACCGCTCCAAACCGAACGGCGAGCAAGGGAGATGGACTTCGCAGATGGTGTCTGTGGAGGGACCACTGATGAGGGACTTGGTGTGCCCCATCCCTGAGACGGTGCACAGGCAAGTGCACCACGTGACGAGCAAGGTGATCAGGCTGGGAACAGGTGCAAATGGCATGGTAGGGTGGGTGGATATCTGGCGCGGCATCCTCCTCTGCGACGTGCTCCAGGAGAGCCCCAAGCTCCATGACATGCCGCTGCCTCTGCCGGCCAAGAGCAACAGCCACAGGGCCTTCCTCAACACCACCGACCAGTACTGCGGCGACGTCGCCGTCAGCCGAGACAAGAGCTTCATCAAGTACGTCGAGATGGAGATCGTCACGCCCAAGATCGTGAGCGCCACGCCACCAGGTGACTGTGATCCTGACCCGTTCCTCGAATGGCTGCGCCGTCGAGAATGCAAGGACCTGAAACGCACCTTGGTCCATGGCCGCTGGAAGGCCACCACATGGAGGATGCCGATCCCGGTCACCTCATGGGACGATTGGTGCCGCGACTGCGCTGTTGAATCTGCCGAGCTCAGCACTGACAACCCAAAGGCTTATGAGTTGCTGTGTGCTGTGAGCAAAGAAAGTCTTAAAGAGGATGATGATGATAAGGCCATGGAGGCGGCAACGACAACCACGACGAGGTTGCCATTGGGACGCCTGGGCATGGCTTACCCTGCCATGAGCATCGATGACGATGTCATTTACGTGCTGACAAAACCCGTCATGGGGAATGGCAAGGCGGCATTTCTGACTGCTGTTGATGTGAGGAGGAAGAAGGTGCTGGCAGTGGCCAAGCTTGATAGCGCCGTTTTCATGCGTTACTACCTTGCCGTTGGGATCTCCAAACATTTTTTCAGCGCTCCAGGTACTTCGCACCTACTGCTCCCTGTTGCCATTTATGTTTTCTGATAATGATTGAAATTTGCTTGTGTGTTGTGGTGCTAATTAACCTGTAGTTACAGCAAGGTAGTATATGCATCATTACCAGCAATGCTGACTTAATTTAGGCGGATATTGCATTCAGTGCAGCGACTGACATTAGAGGACAGCAAAACTGTTGTAGAAATTAAAGTATTTCATTTTTTTTTGCCTAGTTATATTGTCCAATTGTCTAATAGCCACACATAGAGGTCTCATTTTTGTTAGGTACTTTTGCTATTCAAAAGTATATTAGTGACTAGGTCCAGCATCACTGGAGGTCAAATGTTTGTACATAGGATTCACAGTAAATGGGAAACTAATCTAATCCCTCGAGGGGATGTTTGTACCGAAAATCTGCTTCACAGTAAATCTGCTTCTATGTTTGTACCGAAACCACATGACAGAATGAGAAAGATCAGTATGCTGAAAGTTCAGGTCTCTGATCAGTATAACAGGAGGTCATCTCCTATAATGGAAGACAAATTTTAAGGATGCCACATTTTTCACCATAATATTCTTCTCGTCACATAACTCGTACAAGATGGGATATAAGATGCTATGTGGACTATTTGTCAGTCACTTGTATATCTTCCAAAAAATGTGTGGCACCACCAGACATAGAGATCAGATCGCAAATTGTGTACATATTTCACATTACGAACTACATAGCTTTGCATATACTCCATCCGTTTCTAAATATTTGACACCGTTGACTTTTTAGCACATGTTTGACCGCTCGTCTTATTCAAAAACTTTTGTGAAATATGTAAAACTATATGTATACATATAAGTATATTTAACAATGAATCGAATGATAGGAAAAAAAATTAATAATTACTTAAATTTTTTGAATAAAACGAGCGATCAAACATATTTAAAAAAGTCAACGGCATCAAATATTTAGAAATGGAGGGAGTATATATTTGGCCGTCGATCAACAACTTTTGCCATAAGCCTAGTTCATCTTCCAATCTGCTTTTTTTTTTTTTGAAACCTATCTTCCAATCTGCATTGCCATTTACATAACTAGGTAATGATAATTTTCCTGGGATATTTGACCCCATTACCTCTTTTCTTTTTAAAGATTTAGGGCCTGATCCATATGACAGTTCTTGCTTTTGGATGGTCTGACGAATGACCATTCGATGAACATATCAACCTGGTAACCTTGATTCAGGACGGTAAACTTAATGTTGGTGCGGTGCAATGGTAGAGTACTACCAAGAGTCTGCACTGTGTCTGAAGATAAATCTTAGACTACTTGCCATAGATGGAAAATGAAACTTAATCTGTTCCAAAAGTAAAAATGAAACTTGAAACTTTGTTAGAATGCACTGTTGCAGTCTGTGCAGTGGATTCTTGTAGGAACAACCAAACTGTTGTTTTTTTAAGGGAAAATGGCAGGATTACTGCCCATTCATTAAGCAGGAAATGTTTTTCCTTAAAAAGCAGTTTGATAATGACCTGTTCTTAGACAAATGCAGCTCCATGTAAGTATTAAAATGCCTTCGATGGTGGCCAAAAGTTAATTTCTTGTTGTCTCAATGCCACTTCCATTCTCCTGTGATTCATATATCTAAAATTTTGACCAAGGTATAACATCGTTTGCATTCGTCATAAATATTAATATCAGTAAACATGTTGTCAAATCTTATTTCTGCCTCGTTATGCTTCTAATTATATTATATTGTTATTATGCGGTTAATTTAACCATAAAAAAGTAATAATCAAATTGCATTAGATATTAATATCAGTAAACATGTTGTCAAATCTTATTTCTGCCTCGTTATGCTTCTAATTATACTATATTGTTATCATGCGGTTAATTTAACTATAAAAAAGTAATAATCAAATTGCATTAGGACCAAGTTAATTTCAAAACAAGAAGGGAATGAAGCAAGTAATAAGATATTGACCAAACCAATTTCGAAACAAGTAGTTATTATACTGCTGTATTGCTTTGGATTTTGTCTGTCTTATTGTACTTGCCGACGACAACATGAATGCTCTTACCCTTGATCCCAGATAATGCCGTAATTGTTGCTTCTAGGACTTTCTTTAAAAGAAAAAAATATGAGCTATTTTATTTGGTGTAGGTACAAGAGAATCACTTGGACAAGCTGAAGATCATGGGCAGAAGTCAGCAAGAAGAAGAAGAAGAAGACGTGGAAAGCGGCAAGAGTGATGCTGTCCAGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033080