BGIOSGA033144

From RiceWiki
Revision as of 05:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033144| Description = BGIOSGA033144| Definition = Oryza sativa Indica Group BGIOSGA033144, complete gene.| tag = | tid = BGIOSGA033144-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033144

Description

BGIOSGA033144

Definition

Oryza sativa Indica Group BGIOSGA033144, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA033144-TA

Ensembl Protein ID

BGIOSGA033144-PA

Length

5687

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16935464..16941150

Sequence Coding Region

16935464..16935636,16935849..16936008,16936114..16936196,16936307..16936442,16937075..16937188
,16937292..16937375,16937463..16937618,16937714..16937788,16938288..16938394
,16938478..16938658,16938802..16938990,16939367..16939447,16939591..16939725
,16939977..16940299,16940473..16940578,16940704..16940853,16941004..16941150

Genome Context

<gbrowseImage1> name=IndicaChromosome10:16935464..16941150 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:16935464..16941150 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCCGGCAAGTACGTGCGGTACACGCCGGAGCAGGTGGAGGCGCTGGAGAGGGTGTACGCCGAGTGCCCCAAGCCCAGCTCCTCCCGCCGCCAGCAGCTGCTCCGCGACTGCCCCATCCTCGCCAACATCGAGCCCAAGCAGATCAAGGTCTGGTTCCAGAACAGAAGGTGCCGAGATAAGCAGCGGAAGGAGGCATCAAGGCTTCAGGCCGTGAACCGAAAATTGACGGCGATGAATAAGCTTCTCATGGAGGAGAATGAGCGTCTTCAGAAGCAGGTCTCCCAGCTGGTCCATGAGAACGCGTACATGAAGCAGCAACTTCAGAATCCGTCATTGGGCAATGATACAAGCTGTGAATCAAATGTGACCACTCCTCAGAACCCTCTGAGAGATGCAAGTAACCCGTCTGGACTCCTTACAATTGCGGAGGAGACCCTGACAGAGTTCCTCTCCAAGGCTACAGGGACTGCTGTTGATTGGGTGCCAATGCCTGGGATGAAGGTTGATTGCCAACTTCTCAGATTCACTCTGCCTGCATCGAATGACATCGTGGAGATCTTAAAAGACCGCCCATCTTGGTTCCGTGATTGTCGAAGTCTTGAAGTCTTCACAATGTTTCCAGCTGGAAATGGTGGCACGATCGAACTTGTTTACATGCAGATGTATGCTCCTACTACTTTGGTTCCTGCACGAGATTTTTGGACACTTAGATACACAACTACAATGGATGATGGCAGCCTTGTGGTCTGTGAGAGATCATTGAGTGGTTCTGGAGGTGGTCCAAGTACAGCCTCCGCACAGCAATTTGTAAGAGCTGAGATGCTTCCTAGCGGCTATCTAGTGCGCCCATGCGAGGGTGGTGGCTCCATCGTGCATATTGTGGACCATCTGGATCTTGAGGCTTGGAGTGTTCCAGAAGTGCTTCGGCCACTCTACGAGTCATCTAGGGTAGTTGCTCAGAAAATGACTACTGCAGCACTACGGCACATCAGACAAATTGCTCAAGAGACAAGCGGGGAGGTTGTATACGCTTTGGGGAGGCAACCTGCTGTTTTGCGGACATTTAGTCAGAGGTTGAGTAGAGGCTTCAATGATGCTATTAGTGGTTTCAACGATGATGGTTGGTCTGTCATGGGTGGGGATGGCATTGAAGATGTGATCATTGCTTGCAATGCAAAGAAGGTTAGGAATACTAGCACTTCGGCCAATGCTTTTGTAACTCCAGGAGGTGTTATATGTGCTAAGGCATCCATGCTACTGCAGAGTGTCCCACCTGCAGTTTTGGTTCGATTTTTGAGGGAACATCGTTCTGAATGGGCGGATTATAACTTCGATGCATATTCAGCTTCATCTCTGAAGACAAGCTCATGTTCACTTCCTGGGTTGCGGCCTATGAGATTTTCTGGGAGCCAGATCATTATGCCACTTGCTCACACGGTGGAGAATGAAGAGATTTTAGAAGTTGTCCGTCTTGAAGGACAAGCACTTACACATGATGATGGTCTTATGTCTAGAGATATTCACCTGCTTCAGCTTTGCACTGGAATAGATGAGAAATCAATGGGATCCTGCTTCCAGCTTGTCTTTGCACCAATCGATGAGCTTTTCCCTGATGATGCTCCGTTAATATCTTCAGGCTTTCGTGTTATACCGCTGGACATGAAAACAGATGGTACACCTGCTGGTAGAACATTAGATTTGGCATCTAGCCTTGAAGTTGGTTCAACTGCACAGCCCACAGGGGATGCATCTATGGATGACTGTAATCTACGATCAGTGCTGACAATTGCCTTTCAGTTCCCTTATGAAATGCATCTCCAAGACAGCGTTGCAACTATGGCCCGGCAATATGTCCGCAGTATTGTTTCCTCTGTTCAGAGAGTATCAATGGCTATTTCTCCTTCTCGGTCTGGCTTGAATGCTGGGCAGAAGATAATTTCAGGCTTCCCTGAAGCCCCAACGCTAGCTCGTTGGATTTGCCAAAGCTACCAGTTCCATTTGGGGGTGGAGTTACTTAGGCAGGCAGATGATGCTGGGGAAGCACTATTGAAAATGCTATGGGATTACGAAGACGCTATTTTGTGCTGTTCTTTCAAGGAAAAGCCTGTATTTACTTTTGCCAACGAGATGGGACTAAACATGCTAGAAACATCTCTCGTCGCTCTCCAAGATCTCTCACTGGACAAGATATTTGATGAAGCCGGTAGGAAGGCCCTATACAACGAGATCCCGAAATTGATGGAACAGGGTTACGTGTACCTGCCTGGTGGAGTGTGCTTGTCCGGGATGGGGCGCCATGTTTCTTTCGAGCAAGCTGTAGCATGGAAGGTGCTCGGAGAAGACAACAATGTGCACTGCCTCGCCTTCTGCTTCGTCAACTGGTCCTTCGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKVDCQLLRFTLPASNDIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAKKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV</aaseq>

Gene Sequence

<dnaseqindica>1..173#386..545#651..733#844..979#1612..1725#1829..1912#2000..2155#2251..2325#2825..2931#3015..3195#3339..3527#3904..3984#4128..4262#4514..4836#5010..5115#5241..5390#5541..5687#ATGGACTCCGGCAAGTACGTGCGGTACACGCCGGAGCAGGTGGAGGCGCTGGAGAGGGTGTACGCCGAGTGCCCCAAGCCCAGCTCCTCCCGCCGCCAGCAGCTGCTCCGCGACTGCCCCATCCTCGCCAACATCGAGCCCAAGCAGATCAAGGTCTGGTTCCAGAACAGAAGGTGAGCCTAATCATGCACACATATACTATCATACTAGTTTGCCCTTTTTTTTTTTGTGTGTCTGGATGTGAAATGTTATGGTCTTATGGATAAATTGGTTGAGAATGGAGCAATAGCAATGGTAGTGTTCAATTGTTTGCCTTTGTTGGTATTGTGAGGATACAGGAAGAAAGTTACTTGTTGTGGGGTTCTTGAATGTGTTTGCTTTGCAGGTGCCGAGATAAGCAGCGGAAGGAGGCATCAAGGCTTCAGGCCGTGAACCGAAAATTGACGGCGATGAATAAGCTTCTCATGGAGGAGAATGAGCGTCTTCAGAAGCAGGTCTCCCAGCTGGTCCATGAGAACGCGTACATGAAGCAGCAACTTCAGAATGTATGTCTTCGTGTTGTTGAGCTCACATCGTGCTTCGGGTGGAAAAGGCGCTGCCCTTTCTTTGTTTTCTCGCCTGCTCATATCATCTCTGTTCATTGTTTGCAGCCGTCATTGGGCAATGATACAAGCTGTGAATCAAATGTGACCACTCCTCAGAACCCTCTGAGAGATGCAAGTAACCCGTCTGGGTTAGTGAAATTTCCTTTGAATGTTTTGGTTTTGGGCAATTGGAAGCGGCTGCCCTCTAGGGATTGGTTTGCCATTTTCTTGATAAACTAGTTATATGATTTTTGTCCAGACTCCTTACAATTGCGGAGGAGACCCTGACAGAGTTCCTCTCCAAGGCTACAGGGACTGCTGTTGATTGGGTGCCAATGCCTGGGATGAAGGTTGATTGCCAACTTCTCAGATTCACTCTGCCTGCATCGAATGACGTGTGCATTCGAATGTTCTTATTTGTGTTCCCTTTTCTTTGATAAGCCTGTCCGGATTCGTTTGGTATTGTGCCGTTTCACATGGTTGCCGTGTGTGCTGCCCGTGCCTGTGGTTTGGTGAATCTAGAACCAACAAAGGTAATAGCATTCATCAGTACTTCATTTATTTATTTATTTTTAATTCTTAATTCTACAACAATGCCTGCTGTTTGCTTCCAAGAAAAAGAATTCCTAAACCAGCTTCATCTGCAAGTAACTATGCTGTTTTCATGCTGACATACTTTTGATCAAAGAAAAGTCCTTTAAAGTACCCGTCACAAGCACAACTAGCTGTGCTGTGCATACATGAACTCTTTTTTACTTGAGGGGCAGACTCCTTTACTAGAATGAAGAGTTGCCAAGTTTTCGGTCTCACGCCATCCACAAAAAGAAAAGTTCTCGCTCTCTCTGGCTTGACAGCTAAGGTGTTCCACATCCAAAGATTCATTGCAAAATCTTCTCTTCATGCATTTTGTTCCATGTTGGACATAATTCTTCATACGTATTTGGTTGATGTGAATATTTTCTAGAAAGCTGAAAGACTTTATTGTTTTCAGAAAATTGTTGGGAGATTCTTATAGTGTGCTATGCAGATCGTGGAGATCTTAAAAGACCGCCCATCTTGGTTCCGTGATTGTCGAAGTCTTGAAGTCTTCACAATGTTTCCAGCTGGAAATGGTGGCACGATCGAACTTGTTTACATGCAGGTGAGCGTTACATCCTAACTTTTTTCTTGAATTAAGTATCCCATCATTAATTTTTGCCACATGCATTCCCTTTTTATTTATCATTCTTGGCTTTTTCGCTCAGATGTATGCTCCTACTACTTTGGTTCCTGCACGAGATTTTTGGACACTTAGATACACAACTACAATGGATGATGGCAGCCTTGTGGTGCGTTGAGCTTGAGCATCTTCATTTTATTTTAGTTTGCCTACATTGTAAATTAGCACAGGTGTCCTAAGTCCATGTATCTTGCAGGTCTGTGAGAGATCATTGAGTGGTTCTGGAGGTGGTCCAAGTACAGCCTCCGCACAGCAATTTGTAAGAGCTGAGATGCTTCCTAGCGGCTATCTAGTGCGCCCATGCGAGGGTGGTGGCTCCATCGTGCATATTGTGGACCATCTGGATCTTGAGGTGTGATCTTCAAGTTCTGCATTCTTTCTAGTTAGATGTGCTCTGCATTTGAGTCATTATTTCTTTTATTAATTTACTTAGATTCCATTTTACAGGCTTGGAGTGTTCCAGAAGTGCTTCGGCCACTCTACGAGTCATCTAGGGTAGTTGCTCAGAAAATGACTACTGCAGTAAGTTCCTATAACATTTCCTGATCTGCTTTTCTCTTGACAATTCAATGATATTCTCTCTTGTTACATACATATATATGAAGAAATGCCCACTGTTTCCTTATGATTGGTCATTTCCTCAAGACCTACAATTGCATGGTGCAATCCCAATGTTAAGTACCCACTGTTTGTAGTTAGATTAGACGGTTCATACATTGTTCAGTCCCCATAGTAAGTATTACAACGCCTACACCTGAGAAGTGTTGACATATCACTAAATTCTTTGTTTCCTGAAAGTCTAATAGTTTTGGAGAGTTAAGGTTGGGGTAGTGCTTGAGCCTGTAATGTCAATTTCATCATTTTTTTTTCTAGAGGCTACTTAGCCTTATTCAAATAAGTATACTGAAGTGCTTTAAGTTTTCTTTCATATATATTCTAATCATAGCCCATCTTTGCATCTTTGGACTACTGAAATGATATTAATTTTCTTCGTCATATAATGATTACTCTTACTATAAAGGCACTACGGCACATCAGACAAATTGCTCAAGAGACAAGCGGGGAGGTTGTATACGCTTTGGGGAGGCAACCTGCTGTTTTGCGGACATTTAGTCAGAGGTTGAGTAGGTATGTCCAGGATATAAACTTCTTTCGCTTCTACTGTTTATATTGGATGTTTTTTATTCTAACACATTACTATGCCCATTTAGAGGCTTCAATGATGCTATTAGTGGTTTCAACGATGATGGTTGGTCTGTCATGGGTGGGGATGGCATTGAAGATGTGATCATTGCTTGCAATGCAAAGAAGGTTAGGAATACTAGCACTTCGGCCAATGCTTTTGTAACTCCAGGAGGTGTTATATGTGCTAAGGCATCCATGCTACTGCAGGTGAGTGTTAAATATAAATTTGTTTCTATCGATGCAGGCTGCTTAGTTTTCAGTGCCTAAGATGTGAATTCACTTACGTTTTGTTTTTTATTCTTAACTGTAACTTTTCAAGAGCTTACTTTTTTTTTTAATTTGCATCCTAGAGTGTCCCACCTGCAGTTTTGGTTCGATTTTTGAGGGAACATCGTTCTGAATGGGCGGATTATAACTTCGATGCATATTCAGCTTCATCTCTGAAGACAAGCTCATGTTCACTTCCTGGGTTGCGGCCTATGAGATTTTCTGGGAGCCAGATCATTATGCCACTTGCTCACACGGTGGAGAATGAAGAGGTATGCTGACAGATCTTTAACATTTCATAACTTGCTAGGTGCTGTTCCGTGACTATTTTCATTATTAGGTTTTTTTTATTTTTATATAGTATCTTTGAATATGTTCTTATTTATCTAGTTTATTGTCATTTTTCCAATTGATGATAGAGGATTTCTATGTAGCCTTCCATTGTTATTATTATGTCCCTTTAGTAGTTGGTCTTTGTGCTACTTTCCTTGTCTAGTAGTGTGGGGGATCCATTTGTCTGTTGTTCACAAAGTGAGCTTTATAAAAGTCTATATCATTTGGACAAAAACAACTGACAATTTGCATTTATACAAGATAAGATTTATCACTTTTCATGCTACTTTGTTGATGAGTTTTATCAACATACAGATTTTAGAAGTTGTCCGTCTTGAAGGACAAGCACTTACACATGATGATGGTCTTATGTCTAGAGATATTCACCTGCTTCAGGTAATAATTCTCTTCTTTCGGCGCTATCTGGTTTTCAAAAGAGCACTATTACCAATCGCAGTAAAAAAGAGCAAATTATTCTAATAATTAAGTCCCGTTGCAAGGAATTCCTAATGTACCTCCCATCTTGCCTGATCTTTCAGCTTTGCACTGGAATAGATGAGAAATCAATGGGATCCTGCTTCCAGCTTGTCTTTGCACCAATCGATGAGCTTTTCCCTGATGATGCTCCGTTAATATCTTCAGGCTTTCGTGTTATACCGCTGGACATGAAAACAGTGAGTTTTTCTCATGTTAGCCTTTCTTTTTAAGTGCATTAGTTCTGTGTTGTATGGATAATTCTTGAAATTTTTCTGTTCTTTTGAACTCCCATGTAGTGCAAACCATTTTTGGTAGCTTATGGGTTAAAAGCCTTCTAACTTCTGTAGGATGGAGATCCATTAGACCTGAACATCTTGTTTCTACCTTGTTACTTCTATCTGGTTTGATTTTCAGCAGCTAGGATTTTAACCATCAATGTCTTCCACAGGATGGTACACCTGCTGGTAGAACATTAGATTTGGCATCTAGCCTTGAAGTTGGTTCAACTGCACAGCCCACAGGGGATGCATCTATGGATGACTGTAATCTACGATCAGTGCTGACAATTGCCTTTCAGTTCCCTTATGAAATGCATCTCCAAGACAGCGTTGCAACTATGGCCCGGCAATATGTCCGCAGTATTGTTTCCTCTGTTCAGAGAGTATCAATGGCTATTTCTCCTTCTCGGTCTGGCTTGAATGCTGGGCAGAAGATAATTTCAGGCTTCCCTGAAGCCCCAACGCTAGCTCGTTGGATTTGCCAAAGCTACCAGTAAGTACATGTTTATTTCCTATATATCTTATGAATGCCTTTTGGTATTAATAGATAGGAGCTGCATTATTGCTCTATACGGCTATACCACTACCTGTCCAAAATTAAAAATATAGGACTATTACCAAATATTAACTTGTATTCAAGCTGATAAGGATTTGTGGTGTTTGCAGGTTCCATTTGGGGGTGGAGTTACTTAGGCAGGCAGATGATGCTGGGGAAGCACTATTGAAAATGCTATGGGATTACGAAGACGCTATTTTGTGCTGTTCTTTCAAGGTACTATAGTTTTTCCCTTGTTCTTTTCATAATTTCCAACTTGTACATTTTATGTCGTTACATTTAAGTGAGAATAAGCTTTGCCTTTGTATGGCTCATATATTTGGCACTATATATTCTTTCAGGAAAAGCCTGTATTTACTTTTGCCAACGAGATGGGACTAAACATGCTAGAAACATCTCTCGTCGCTCTCCAAGATCTCTCACTGGACAAGATATTTGATGAAGCCGGTAGGAAGGCCCTATACAACGAGATCCCGAAATTGATGGAACAGGTAGATAGCCACTTGCAAAATCCACATTTTCTTTTCCCCATGTAATAACAGCAATGTCCTAACTGCTAAACACAAACCAAGTAGAGATGCAAGAACTCACCGTAGCCACAGAGTAATCTTTCGATTTCGATTCAATCTGTTCTTGTTCAGGGTTACGTGTACCTGCCTGGTGGAGTGTGCTTGTCCGGGATGGGGCGCCATGTTTCTTTCGAGCAAGCTGTAGCATGGAAGGTGCTCGGAGAAGACAACAATGTGCACTGCCTCGCCTTCTGCTTCGTCAACTGGTCCTTCGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033144

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA033144&oldid=32366"