BGIOSGA033245

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Revision as of 05:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033245| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033245, complete gene.| tag = OsI_342...")
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Gene Name

BGIOSGA033245

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033245, complete gene.

LocusTag

OsI_34254

Ensembl Transcript ID

BGIOSGA033245-TA

Ensembl Protein ID

BGIOSGA033245-PA

Length

4018

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18370544..18374561

Sequence Coding Region

18370544..18371550,18372314..18374561

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18370544..18374561 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18370544..18374561 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTGTTGAAGAAGAAACTGGAGTTTGCTTGTGATATTGATAATGAGGGGCAAAAACTCATGTCCAATATGGAAATGATTCAAGCTGTTCTTAGAGGAGGCGAGAAGATGAAGTTTGATGATGTGCAGAGAGCCTGGTTTTCTGATCTGAAAGATGCTGGCTATGATGCCATGGATGTATTGGATGAATACCTCTATGAAGTTCAGCGACGTAAGGTGATCCATCTTCCCCATCTGCGTAACCATACATTAAGTTCTGCTTTGAATCCTTCACGTCTTAAATTTATGAGTAATATGGAAAGGAAGATTAAGTATATAGCTGGTAAAATTGATGATTTGAAAAATAAGCGCTTAACCTTCAAAGTAGAGGTCCATGATCAAACAGATCAACAACATGAAGGAAGTATGTGTAACGGGAGTACCTCTCTTCCTCCAATTTCACCCTGTGGTAGAGAGAATGATCAGGAGAGGATTGTAAATATGCTTCTCCAACGTGATTTGAAGCCCAACATTGCAGTATTGCCTATACTGGGTGAGGCTTATATTGGGAAGACAACTGTTGCTCAGCTAATCATCAATGACAAGCGTGTATCAAGGCACTTTGATGTCAGAATATGGGCTCATGTATCACCTGATTTCAATATAAAAAGGATATCTGCATCTATCCTAGAGTCTATATATGACAAATCTCATTATGACAACCTGGACACCCTCCAAAAACACATACAAAAGCGGCTACGAGGGAAAAGGTTCCTGCTTGTCCTAGATGACTATTGGACAGAGAACTGGCATGACTGGGAGGAGCTCAAGCGTCCATTGCTCAAGGCTTCTGCTGGAAGCAAGGTTATAGTGACAACACGGAGTGGGGCAGTCGCAAAATTGCTTGGTATGGATCTAACGTATCAAGTGAAACCTCTATCAAGTGAGGACTGCTGGTCATTGTTCCGCCGATGCGCCCTTGGCGTGGAAGTCAAAGAATATAATTCTGGAGATTTCCTCGATAGATTGAAGATGGAAGTTCTACAGAAGTGTAACGGTGTTCCTTTCATTGCGGCCAGCTTAGGCCATAGATTACACCAGAAGGATAAAAGTACGTGGGTTGCTATTCTGCAAGAGGAAATTTGCGATGCCAATCCCAATTATTTCATTCGGGCCCGTCAACTGAGCTATGCACAGTTACACTCCCATCTCAAGCCTTGTTTTGCTTACTGCTCAATTATTCCATGGGAATTCCAGTTTGAGGAGGAGTGGCTTATCAAGCATTGGATGGCTCATGGTTTCATTCAGTCTCAGCCTGGCGATGTAGCCAGAGCCACTGGCAGTTGTTACTTTAGAACTTTAGTTGAACAGTCCTTTTTCCAGAGAGAACTGGTTCACCATGGTGGGGAACGACACCGTTATAGCATGTCCCGAATGATGCATGAGCTCGCTTTGCACGTCTCAACTGATGAATGCTATATCTTGGGGAGTCCTGACAAAGTTCCAAAGAAGGTCCAGTCCGTCCGGCATTTAACAGTATTAATCGACAAGTTTGCCGACCCAAACATGTTCGAGACAATTTCCCAATATAAGCATTTACATACACTTCTAGTCACTGGTGGCACAAGTTATGTACTGAGTATCCCCAAAAATATACTCAATAGTACATTAAAAAAGCTTCGACTTCTAGAATTGGATAACATTGAGATCACCAAGCTACCTAAATCAATTGGAAATTTGATACACCTCCGCTGTCTCATGCTCCAAGGATCCAAGATAAGACAGCTGCCTGAATCAATATGCAGCCTGTACAATCTTCAAACTCTGTGCCTAAGGAACTGCTATGATCTTGAGAAGTTGCCACGCAGAATAAAGTGTCTTCGCAAGCTAAGGCATATCGATCTGCATCTGGATGATCCTTCCCCTGATATCCATGGATTGAAGGATATGCCTGTGGATATAGGATTGTTGACTGATCTTCAGACACTGTCAAGGTTTGTCACAAGCAAGAGGAACATTCTCGACAACCACAGCAGTATTAAGGAGCTAGATAAATTGGACAATCTATGCGGGGAACTACTCATTTCAAATCTGCATGTTGTTAAGGATGCGCAAGAAGCTGCGCAGGCACATTTGGCTTCCAAACAATTTCTCCAAAAGATGGAGCTCTCATGGAAAGGCAACAACAAACAAGCTGAACAAATTTTGGAGCAACTAAAACCACCCTCCGGAATAAAAGAGCTTACCATTTCAGGTTATACCGGCATATCGTGTCCTATCTGGCTTGGTTCTGAAAGCTACACGAATCTAGTCACTTTGTCACTCTATGATTTCAAGAGCTGCACTGTTGTTCCTTCCCTTTGGCTATTACCTCTTTTGGAAAATCTCCACATCAAGGGATGGGATGCATTGGTTAAATTTTGTGGGAGCAGTTCTGCCAGTTTCCAAGCTCTGAAGAAGCTACATTTCGAGAGGATGGACAGTTTAAAGCAATGGGATGGGGATGAGAGAAGTGCATTTCCTGCCCTTACTGAGCTGGTTGTCGACAATTGCCCCATGCTGGAGCAACCAAAATTTCCTGGTCTTCAGAACTTCCCATCGCTGACGAGTGCGAATATAATCGCGAGCGGTAAGTTTATTTGGGGACCATGGCGCTCCCTTTCTTGTCTTACATCCATCACCCTTCGCAAACTGCCGACGGAGCACATCCCACAGCACATCCCACCTGGGTTAGGACAGCTCCGTTTTCTGCGACACCTTAAGATCATTCATTGTGAGCAACTGGTGTACATGCCTGAGGATTGGCCACCTTGCAATCTGATTCGCTTCTCCGTGAAGCATTGCCCTCAGCTTCTTCAGCTACCGAACGGTCTCCAACGCCTGCAAGAATTGGAAGACATGGAGATTGTAGGATGTGGAAAGCTTACCTGCCTCCCAGAGATGAGAAAACTTACTTCCCTAGAAAGACTGGAGATTTCAGAATGTGGCTCGATTCAGTCCCTGCCAAGTAAAGGTTTGCCCAAGAAACTGCAGTTCTTGAGCATAAACAAATGCCATGGGCTTACCTGCCTCCCAGAGATGAGAAAACTTACTTCCCTAGAAAGACTGGAGATTTCAGAATGTGGCTCGATTCAGTCCCTGCCAAGTAAAGGTTTGCCCAAGAAACTGCAGTTCTTGAGCGTAAACAAATGCCCATGGCTTAGTTCGCGTTGCATGGTTCTGGGAAGTACTATCTCTTCACTATGGATTGACGGTGAACTTATTAGGTACTAG</cdnaseq>

Protein Sequence

<aaseq>MELLKKKLEFACDIDNEGQKLMSNMEMIQAVLRGGEKMKFDDVQRAWFSDLKDAGYDAMDVLDEYLYEVQRRKVIHLPHLRNHTLSSALNPSRLKFMSNMERKIKYIAGKIDDLKNKRLTFKVEVHDQTDQQHEGSMCNGSTSLPPISPCGRENDQERIVNMLLQRDLKPNIAVLPILGEAYIGKTTVAQLIINDKRVSRHFDVRIWAHVSPDFNIKRISASILESIYDKSHYDNLDTLQKHIQKRLRGKRFLLVLDDYWTENWHDWEELKRPLLKASAGSKVIVTTRSGAVAKLLGMDLTYQVKPLSSEDCWSLFRRCALGVEVKEYNSGDFLDRLKMEVLQKCNGVPFIAASLGHRLHQKDKSTWVAILQEEICDANPNYFIRARQLSYAQLHSHLKPCFAYCSIIPWEFQFEEEWLIKHWMAHGFIQSQPGDVARATGSCYFRTLVEQSFFQRELVHHGGERHRYSMSRMMHELALHVSTDECYILGSPDKVPKKVQSVRHLTVLIDKFADPNMFETISQYKHLHTLLVTGGTSYVLSIPKNILNSTLKKLRLLELDNIEITKLPKSIGNLIHLRCLMLQGSKIRQLPESICSLYNLQTLCLRNCYDLEKLPRRIKCLRKLRHIDLHLDDPSPDIHGLKDMPVDIGLLTDLQTLSRFVTSKRNILDNHSSIKELDKLDNLCGELLISNLHVVKDAQEAAQAHLASKQFLQKMELSWKGNNKQAEQILEQLKPPSGIKELTISGYTGISCPIWLGSESYTNLVTLSLYDFKSCTVVPSLWLLPLLENLHIKGWDALVKFCGSSSASFQALKKLHFERMDSLKQWDGDERSAFPALTELVVDNCPMLEQPKFPGLQNFPSLTSANIIASGKFIWGPWRSLSCLTSITLRKLPTEHIPQHIPPGLGQLRFLRHLKIIHCEQLVYMPEDWPPCNLIRFSVKHCPQLLQLPNGLQRLQELEDMEIVGCGKLTCLPEMRKLTSLERLEISECGSIQSLPSKGLPKKLQFLSINKCHGLTCLPEMRKLTSLERLEISECGSIQSLPSKGLPKKLQFLSVNKCPWLSSRCMVLGSTISSLWIDGELIRY</aaseq>

Gene Sequence

<dnaseqindica>1..1007#1771..4018#ATGGAGCTGTTGAAGAAGAAACTGGAGTTTGCTTGTGATATTGATAATGAGGGGCAAAAACTCATGTCCAATATGGAAATGATTCAAGCTGTTCTTAGAGGAGGCGAGAAGATGAAGTTTGATGATGTGCAGAGAGCCTGGTTTTCTGATCTGAAAGATGCTGGCTATGATGCCATGGATGTATTGGATGAATACCTCTATGAAGTTCAGCGACGTAAGGTGATCCATCTTCCCCATCTGCGTAACCATACATTAAGTTCTGCTTTGAATCCTTCACGTCTTAAATTTATGAGTAATATGGAAAGGAAGATTAAGTATATAGCTGGTAAAATTGATGATTTGAAAAATAAGCGCTTAACCTTCAAAGTAGAGGTCCATGATCAAACAGATCAACAACATGAAGGAAGTATGTGTAACGGGAGTACCTCTCTTCCTCCAATTTCACCCTGTGGTAGAGAGAATGATCAGGAGAGGATTGTAAATATGCTTCTCCAACGTGATTTGAAGCCCAACATTGCAGTATTGCCTATACTGGGTGAGGCTTATATTGGGAAGACAACTGTTGCTCAGCTAATCATCAATGACAAGCGTGTATCAAGGCACTTTGATGTCAGAATATGGGCTCATGTATCACCTGATTTCAATATAAAAAGGATATCTGCATCTATCCTAGAGTCTATATATGACAAATCTCATTATGACAACCTGGACACCCTCCAAAAACACATACAAAAGCGGCTACGAGGGAAAAGGTTCCTGCTTGTCCTAGATGACTATTGGACAGAGAACTGGCATGACTGGGAGGAGCTCAAGCGTCCATTGCTCAAGGCTTCTGCTGGAAGCAAGGTTATAGTGACAACACGGAGTGGGGCAGTCGCAAAATTGCTTGGTATGGATCTAACGTATCAAGTGAAACCTCTATCAAGTGAGGACTGCTGGTCATTGTTCCGCCGATGCGCCCTTGGCGTGGAAGTCAAAGAATATAATTCTGGAGATTTCCTCGATAGGTACCCTCTTCAATCTTAATCTCTCCGTTCCAAAATATAAGAACTTTTAGCTTTTTCTTAGAGAGATTAAGGTTGGATGAAAAAGATTATGATGCCCCTCATTAGGTGAGGGATATTTGACTATTTGAGGAGCGGGGGAGGGTTGTTAGGGATAAAATTGGGTGAAATTTAACTGGGGAGTAATTGGTGTGGAAAGTAGTACTCTAGAAGTCCTTATATTTTGGAACAAATTTTGAACCCCAAAAGTCCTTATATTTTGAGACACAAGGACTGAGGGAGTAACTAGTACTAGCATAAGTAAATTTTGGGCACAAATGCTAAAACCTCGGCACCTGATGCCCCATCTCTAGTTTTTTTAGATGATTGTCGTAACAGAGGTTTTTTGAATATAAAAGTTCATACAGTAACACTCCGTATTAATAAATTCTATAATCATCAGATGACCTGACATCTGATCTCTTCTTTCACCCGCAGAAAGATGCATCAAGTTTCTTATAGGGTTAAAGTTAAACTAATGCCCACTTTTCTATTCGCCTTTTTCAGAGTTTATCTCTAACGCCGTATACATTTTTCCCTCTATCTTAATGAAATGATACAGAGATCTCCTACGTGTTCTAAAAAAACTAATACCCACCTTTCTATCCATCAGTTTTTCCTTCTTTTTTTTTTCTATTACATGTTCTGTTTTAGCCTCAAACATTTCTATGTATTTGACTATTTGCAACGTTGTTCTTCGACTGTTGCAAAAATGGCTGTTTTGCAGATTGAAGATGGAAGTTCTACAGAAGTGTAACGGTGTTCCTTTCATTGCGGCCAGCTTAGGCCATAGATTACACCAGAAGGATAAAAGTACGTGGGTTGCTATTCTGCAAGAGGAAATTTGCGATGCCAATCCCAATTATTTCATTCGGGCCCGTCAACTGAGCTATGCACAGTTACACTCCCATCTCAAGCCTTGTTTTGCTTACTGCTCAATTATTCCATGGGAATTCCAGTTTGAGGAGGAGTGGCTTATCAAGCATTGGATGGCTCATGGTTTCATTCAGTCTCAGCCTGGCGATGTAGCCAGAGCCACTGGCAGTTGTTACTTTAGAACTTTAGTTGAACAGTCCTTTTTCCAGAGAGAACTGGTTCACCATGGTGGGGAACGACACCGTTATAGCATGTCCCGAATGATGCATGAGCTCGCTTTGCACGTCTCAACTGATGAATGCTATATCTTGGGGAGTCCTGACAAAGTTCCAAAGAAGGTCCAGTCCGTCCGGCATTTAACAGTATTAATCGACAAGTTTGCCGACCCAAACATGTTCGAGACAATTTCCCAATATAAGCATTTACATACACTTCTAGTCACTGGTGGCACAAGTTATGTACTGAGTATCCCCAAAAATATACTCAATAGTACATTAAAAAAGCTTCGACTTCTAGAATTGGATAACATTGAGATCACCAAGCTACCTAAATCAATTGGAAATTTGATACACCTCCGCTGTCTCATGCTCCAAGGATCCAAGATAAGACAGCTGCCTGAATCAATATGCAGCCTGTACAATCTTCAAACTCTGTGCCTAAGGAACTGCTATGATCTTGAGAAGTTGCCACGCAGAATAAAGTGTCTTCGCAAGCTAAGGCATATCGATCTGCATCTGGATGATCCTTCCCCTGATATCCATGGATTGAAGGATATGCCTGTGGATATAGGATTGTTGACTGATCTTCAGACACTGTCAAGGTTTGTCACAAGCAAGAGGAACATTCTCGACAACCACAGCAGTATTAAGGAGCTAGATAAATTGGACAATCTATGCGGGGAACTACTCATTTCAAATCTGCATGTTGTTAAGGATGCGCAAGAAGCTGCGCAGGCACATTTGGCTTCCAAACAATTTCTCCAAAAGATGGAGCTCTCATGGAAAGGCAACAACAAACAAGCTGAACAAATTTTGGAGCAACTAAAACCACCCTCCGGAATAAAAGAGCTTACCATTTCAGGTTATACCGGCATATCGTGTCCTATCTGGCTTGGTTCTGAAAGCTACACGAATCTAGTCACTTTGTCACTCTATGATTTCAAGAGCTGCACTGTTGTTCCTTCCCTTTGGCTATTACCTCTTTTGGAAAATCTCCACATCAAGGGATGGGATGCATTGGTTAAATTTTGTGGGAGCAGTTCTGCCAGTTTCCAAGCTCTGAAGAAGCTACATTTCGAGAGGATGGACAGTTTAAAGCAATGGGATGGGGATGAGAGAAGTGCATTTCCTGCCCTTACTGAGCTGGTTGTCGACAATTGCCCCATGCTGGAGCAACCAAAATTTCCTGGTCTTCAGAACTTCCCATCGCTGACGAGTGCGAATATAATCGCGAGCGGTAAGTTTATTTGGGGACCATGGCGCTCCCTTTCTTGTCTTACATCCATCACCCTTCGCAAACTGCCGACGGAGCACATCCCACAGCACATCCCACCTGGGTTAGGACAGCTCCGTTTTCTGCGACACCTTAAGATCATTCATTGTGAGCAACTGGTGTACATGCCTGAGGATTGGCCACCTTGCAATCTGATTCGCTTCTCCGTGAAGCATTGCCCTCAGCTTCTTCAGCTACCGAACGGTCTCCAACGCCTGCAAGAATTGGAAGACATGGAGATTGTAGGATGTGGAAAGCTTACCTGCCTCCCAGAGATGAGAAAACTTACTTCCCTAGAAAGACTGGAGATTTCAGAATGTGGCTCGATTCAGTCCCTGCCAAGTAAAGGTTTGCCCAAGAAACTGCAGTTCTTGAGCATAAACAAATGCCATGGGCTTACCTGCCTCCCAGAGATGAGAAAACTTACTTCCCTAGAAAGACTGGAGATTTCAGAATGTGGCTCGATTCAGTCCCTGCCAAGTAAAGGTTTGCCCAAGAAACTGCAGTTCTTGAGCGTAAACAAATGCCCATGGCTTAGTTCGCGTTGCATGGTTCTGGGAAGTACTATCTCTTCACTATGGATTGACGGTGAACTTATTAGGTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033245