BGIOSGA033279

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Revision as of 05:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033279| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033279, complete gene.| tag = OS10G05...")
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Gene Name

BGIOSGA033279

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033279, complete gene.

LocusTag

OS10G0516300

Ensembl Transcript ID

BGIOSGA033279-TA

Ensembl Protein ID

BGIOSGA033279-PA

Length

5125

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18854861..18859985

Sequence Coding Region

18854861..18855107,18855244..18855320,18855801..18855907,18856014..18856095,18856171..18856283
,18856492..18856555,18856661..18856735,18857169..18857285,18857609..18857677
,18857797..18857889,18858206..18858308,18858513..18858637,18858790..18858839
,18858950..18859016,18859136..18859215,18859511..18859639,18859747..18859813
,18859902..18859985

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18854861..18859985 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18854861..18859985 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAACGAGTGCTCCGCGCGGCGGCGGCGGGGATTGGCCACGCGTCGGGCCACCGCGCGCCGAGGTGGGGCGCGGCGGCGGCGGCGGCGAGGTGGCTGAGCGGGGGCAGGGAGGCGATGAGCTACGACGTGGTGGTCGTGGGGGCTGGGCCCGCGGGGCTCGCCGCGGCCATCCGGCTGAAGCAGCTCTGCCGCGACGCCGACACCGACCTCTCCGTCTGCGTCCTCGACGAAGGGCTCGAAGTCGGTGCGCATGTATTGTCGGGGAACGTGTTCGAGCCACGAGCGTTGGATGAACTCATCCGGAAGTGGAGGCAAGAGGATACCCCAATAAGAGTCCCCGTCTCATCTGACAAGTTCTGGCTGTTGACAAAGAATAAGGCATGGACACTTCCATCTCCTTTCGATAACAAGGGAAACTATGTGATAAGCTTGAGCCAAATGGTGCGATGGATGGCCTCCAAAGCTGAAGAATTGGGTGTTGAAGTATATCCAGGTTTTGCTGCGAGTGAGATCCTTTATGATGAAAATCAAATAGTTACAGGCGTTGCAACCAATGATGTTGGTATTGCTAAAGATGGTTCCAAAAGGGAAACTTTTCAACCTGGTGTTGAACTAAGAGGCGACTACTTAGAAAATGCAGGGCGAATGACACTGTTGGCCGAGGGTTGCCGAGGTTCATTATCAGAGAAAATAATAAGGAACCACAAGCTCAGAGAGAGTGGGCAAGGCCAGCATCAGACATATGCTCTTGGAATTAAGGAGGTTTGGGAGATCGAGGAAGGAAAGCACAAGCCAGGTTCTGTGATTCATACTGTAGGGTGGCCTTTGGACTCGAAAACATATGGAGGATCATTTATGTATCACCTTGATGATAGACAGTTAGCGATAGGTCTGGTTGTTGCCTTGAACTATCAAAATCCTTTCATGAGCCCATATGATGAATTCCAGAAATTCAAGCAACACCCTGCTGTCAGGACAATTTTGGATGGTGGAACAGTTCTTCAGTATGGTGCTCGTACGTTGAATGAAGGTGGTTTTCAATCAATACCAAATCCAGTTTTCCCTGGAGGTGCAATTATTGGATGCTCTGCAGGGTTCCTTAATGTTCCCAAAATAAAAGGAACTCATACAGCCATGAAGTCAGGTATGCTGGCTGCAGAAGCAACTTTCAAAACTCTTGTTGAAGGATCTTCGATGGAACTCTATTGGGAGAATCTCAAGAAGTCATGGATATGGGAAGAGCTTTATAGAGCTCGGAATTACAGACCAGCATTTGAATATGGATTTATTCCAGGCATTGCCTTGTCTGCACTGGAACGATACGTATTCAAAGGAAAGTCCCCCTTTACCTTAAAGCACGGGATACCTGACCATGAAGCAACAGATATGGCCAGTTTGCACTCGCCTATTCAATATCCGAAACCAGATGGTCAAATATCCTTTGACGTACCAACTTCTTTATACAGGAGCAGCACAAACCATGAGCATGATCAACCTCCTCATCTCCGTTTGAGGGATCCTACAGTACCGGAGAGAGTAAATCTTCCTCTGTATGCTGGACCAGAGTCACGTTATTGTCCAGCTCGAGTTTACGAGTATGTCACCGACGAGAAAGGTGACCAGAAGCTTCACATAAATGCTCAAAATTGTCTTCATTGCAAGGCTTGTGACATCAAAGATCCAAAGCAAAACATCGAATGGACCGTTCCAGAAGGTGGAGGCGGCCCAGGGTACACAGTAATGTAG</cdnaseq>

Protein Sequence

<aaseq>MQRVLRAAAAGIGHASGHRAPRWGAAAAAARWLSGGREAMSYDVVVVGAGPAGLAAAIRLKQLCRDADTDLSVCVLDEGLEVGAHVLSGNVFEPRALDELIRKWRQEDTPIRVPVSSDKFWLLTKNKAWTLPSPFDNKGNYVISLSQMVRWMASKAEELGVEVYPGFAASEILYDENQIVTGVATNDVGIAKDGSKRETFQPGVELRGDYLENAGRMTLLAEGCRGSLSEKIIRNHKLRESGQGQHQTYALGIKEVWEIEEGKHKPGSVIHTVGWPLDSKTYGGSFMYHLDDRQLAIGLVVALNYQNPFMSPYDEFQKFKQHPAVRTILDGGTVLQYGARTLNEGGFQSIPNPVFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATFKTLVEGSSMELYWENLKKSWIWEELYRARNYRPAFEYGFIPGIALSALERYVFKGKSPFTLKHGIPDHEATDMASLHSPIQYPKPDGQISFDVPTSLYRSSTNHEHDQPPHLRLRDPTVPERVNLPLYAGPESRYCPARVYEYVTDEKGDQKLHINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYTVM</aaseq>

Gene Sequence

<dnaseqindica>1..247#384..460#941..1047#1154..1235#1311..1423#1632..1695#1801..1875#2309..2425#2749..2817#2937..3029#3346..3448#3653..3777#3930..3979#4090..4156#4276..4355#4651..4779#4887..4953#5042..5125#ATGCAACGAGTGCTCCGCGCGGCGGCGGCGGGGATTGGCCACGCGTCGGGCCACCGCGCGCCGAGGTGGGGCGCGGCGGCGGCGGCGGCGAGGTGGCTGAGCGGGGGCAGGGAGGCGATGAGCTACGACGTGGTGGTCGTGGGGGCTGGGCCCGCGGGGCTCGCCGCGGCCATCCGGCTGAAGCAGCTCTGCCGCGACGCCGACACCGACCTCTCCGTCTGCGTCCTCGACGAAGGGCTCGAAGTCGGTGCGTGTCTTCCTCCGGAATCGGTTCCCCCTTCGGTCCGGTTGCTTGCGTCTTAGCACGCCAGTGCGCGATGGCGTTACTCTACTCCTGCTCGTGTAATTTGGCGTTTGTTTGATTTTGCTTGCTCTCGCTGCAGGTGCGCATGTATTGTCGGGGAACGTGTTCGAGCCACGAGCGTTGGATGAACTCATCCGGAAGTGGAGGCAAGAGGATGTATGCCCTTCTCTGCTCTAAACTGGATATGCTATATAAGTATGTTTTAGTTGGCCATTCTGCTGTCTAGACTCTAGACCAAGTGCAAATTAACTATGGTTGATCCCTTCATCAGAAGCCTGAGGTTCATTTGATCATGGGAAATCATGGATATTTTGGTGTGTGAGGATGTTTCAGCTCCCTAATTTTGCTTTGCGTAGGGCAAATGCACAGAAATAAACGATATATAATAATTATTATTTATTTATTTTTTTTTTTTTGGGGGGGGGGGGGGCGAAATTTAATTAGTTGATGCTCAGTAACAGTTTCAAACTAACAATTGCATCATGAGATGTCCCAAATTCCCAATGAATAAGACCTGGTCCTTTTGATATGGCAGTTCCTTGAATAATGATAGCAAAATACACTTCAGTAACAAAGTAAATTTAGTTCTAAGTACATAAGGCATTGATATTTATGTGCCTACTGTGTGTTTGATAGACCCCAATAAGAGTCCCCGTCTCATCTGACAAGTTCTGGCTGTTGACAAAGAATAAGGCATGGACACTTCCATCTCCTTTCGATAACAAGGGAAACTATGTGATAAGGTGCTGAGATTTTCTTCTAATTATTAGCTTCATCTATGCAAAGTTCTAGTATATTTCACTTATTCGACAGTATCTGATTTTAGAAACAATGCTTAATATTGTCCAGCTTGAGCCAAATGGTGCGATGGATGGCCTCCAAAGCTGAAGAATTGGGTGTTGAAGTATATCCAGGTTTTGCTGCGAGTGAGGTACCACCATTTTTCAGTTGTGGAACTCTTCTGTCAAAGGGCTAATATTAATCTGTCTGAATTCTTCTCTAACAGATCCTTTATGATGAAAATCAAATAGTTACAGGCGTTGCAACCAATGATGTTGGTATTGCTAAAGATGGTTCCAAAAGGGAAACTTTTCAACCTGGTGTTGAACTAAGAGGCGAGTAACCATCCTTATTGAGTGCATAATGTTGAGATAATCAATTGCTCCTTTTTTTTCCGTTGTTTGTATAGGCAGATAATAGTGATTTTGTTTTCCCTATTGTTTGTCTTTAAAACCTTTTCAGTCTGTTGACGTTGTTCTTTCTGTAAAATTGGTACCCATTTGTTCCAAGCTGGTGGTTCCACTCACGTGTCTATTCTCATGGTCAGCTACTTAGAAAATGCAGGGCGAATGACACTGTTGGCCGAGGGTTGCCGAGGTTCATTATCAGAGGTCAGCATAAATCTAGTTTTATGAAATTCATATGTTCTTTTTTATATATATATTTCATTTGGTGCTAACACTTATCATGTTATTCTTCCCTCTTTCTCTTTCCAGAAAATAATAAGGAACCACAAGCTCAGAGAGAGTGGGCAAGGCCAGCATCAGACATATGCTCTTGGAATTAAGGAGGTACCTTGATATTCAGTAATACCACTTTCAGTTTCCAAATGCCTGTTCTCAAATCTTATCAAACCAACTCATATATCTCGTGAGGAAAACAAGATCCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGAAAATCGTCTGACTTAAATCAGTCCCATACCACATTATACATGCAATATATGCAAACTATAGGTAACACTCTTTTATGTTAACATTTTCAAAATCACCCATGCACAAACACTTCAAAAATATTTTCTAATAAAGAACTTATGGTTATTTTTGAGGAATTCCATTAGATGCTTTCGTTTGTTCCTTATAGAACTATGATTTACTAGCTTTATCTTCAAAACATCTCCATTCTTTTCCTTAAAATGACTTACAGACGAGTTAGCAGTGCCACTTGAAACTAATTGGAAGCTTTCTTAGGTTTGGGAGATCGAGGAAGGAAAGCACAAGCCAGGTTCTGTGATTCATACTGTAGGGTGGCCTTTGGACTCGAAAACATATGGAGGATCATTTATGTATCACCTTGATGATAGACAGGTAGTTCTTCTGTTATTTGCTACAATATCCCTTTATGAGTTCTCTTTTCTTTTGCAAATATATGTTCAGTGAAGTCTGTCATCTGTGTAAAGATGTAAAAATGTATTTATCTTACATGATAGATGCATCCTTTTCCACAACCTAAGTTCACAGCTTACAGATTATAATTTGGGTTTAAAGGAGGAACCATTAATTCATCCCTTATCATAAGGCCTTTTGTTTGCAGAGTGGATAAATGTATAACTTGCTCAGTTTTTTCCCCGGAAATTTTGATTACTTTATCGCTTAGTGGTGTTTACTTTATCTCTGCTCTGATATTTCAGTTAGCGATAGGTCTGGTTGTTGCCTTGAACTATCAAAATCCTTTCATGAGCCCATATGATGAATTCCAGGTTAGTCAAATTTCTATGGGTATGTTCTTTTATGATGGTAGTGTACTAGTATAGTCCTGAACTCCTGATGGTCGATTTTTTTTCTTCTAAGCATTATGCAATCATATTTTATATTTCAGAAATTCAAGCAACACCCTGCTGTCAGGACAATTTTGGATGGTGGAACAGTTCTTCAGTATGGTGCTCGTACGTTGAATGAAGGTGGTTTTCAAGTAAGTGGCATGTCAAAGAAATGAAAATTTTGTTGTAAATAGATTCATATGTAAGCTCTGCGCATAACTATATTGGGCATCTGCCGGTTTATGACATTACAAGCATTTTACATCGAAATCAATTCACCTGGTGTTTCCGGTTAACTGGTACATGAACTTTGAGACACAGCATTGTTATAGTGTTCTTGTTATGCTATATGTTTCAACACTGTAGCTTTTACCTCTGTCATTCAGTCAGGTCTCCTGTATTTTGTTTTCTTTAGTTGTTAGCAATAGTTACTGATAGGGTGCTGATAATGTTCATGTAAAATTTCAGTCAATACCAAATCCAGTTTTCCCTGGAGGTGCAATTATTGGATGCTCTGCAGGGTTCCTTAATGTTCCCAAAATAAAAGGAACTCATACAGCCATGAAGTCAGGTATCTCTTTGCGTGATGCTTTGAGCTTTATGTTGTAGTGCTGCCTGTTCACTTTTATGTCAATTACTTTACATTTCTTTCAGAGTACACATTTTGATCTCCTTAAAGTGGCACATTATTCTCAACCAAAAATGGTAGATCATGTGTGCTAACTGTAGAGTATGCTGAGAAGCCATGTACTAAAGGGTTGGATGTGTACAACAGGTATGCTGGCTGCAGAAGCAACTTTCAAAACTCTTGTTGAAGGATCTTCGATGGAACTCTATTGGGAGAATCTCAAGAAGTCATGGATATGGGAAGAGCTTTATAGAGCTCGGAATTACAGACCAGTATGTGATTATGTTTGTTACAGACTTCCTGAACATTTATTTTGTCTAATTAAGTATTCCGTCATACAAGCTTTTGAAGTGAGGATATGCAGTTTCTGTTTTTTCCTTTCTGAAGCTATTGAGCAGACAGATTTATTTATATTCTGTTACAGGCATTTGAATATGGATTTATTCCAGGCATTGCCTTGTCTGCACTGGAACGGTGAGGCCCAACTAATTTGTTAATATTACTTAATATTCTATACTTCTTTTGGGATGAAGTCAATACTCTACTTGGTTCGCTGACGTTTGTTGTTATTGTTCAATTTTTAGATACGTATTCAAAGGAAAGTCCCCCTTTACCTTAAAGCACGGGATACCTGACCATGAAGCAACAGATGTGAGTTTCAAGTACTGCTGGTGCTCATCTAATATAGACATTCTTTGTTAGCATAAATGAAAAGCACATTGTTTCATTTTTTCACTACTGACATTAACCAAACACATTCTTGTGAACAGATGGCCAGTTTGCACTCGCCTATTCAATATCCGAAACCAGATGGTCAAATATCCTTTGACGTACCAACTTCTTTATACAGGTAAGATATGCAGCAAGAATGATGACGTCCATCACTCTTTAGACATCACTCTTTAGAATTCTTTCTTTCAAAGTTTCAAGTTATGTTCACAATTTTTAGAAGCAATAGTGCTTTCCTGTGAATTGGTTTAGAGCTTTTTCTTAATAGTCACATGTAGTATAGTGGCGGCAGATTCATCAAATTTAGTGGGTGAATGGCTATCGTTCTCCATTTTTTTTTCATGAACTGAAATGTAATGTGGAGTGATTTACATGCATATTCTGTACACTGATCATGTATGATCTCATTTATACAGGAGCAGCACAAACCATGAGCATGATCAACCTCCTCATCTCCGTTTGAGGGATCCTACAGTACCGGAGAGAGTAAATCTTCCTCTGTATGCTGGACCAGAGTCACGTTATTGTCCAGCTCGAGTTTACGAGTAAGGAAATCGGCCTTTCTTACTTGAATGAAAGATAACCTACAATTAAGTACTGAATGCCCAAACAAGGATTGCTAATCACTTCTGCCATACATGTTCTCATGCAGGTATGTCACCGACGAGAAAGGTGACCAGAAGCTTCACATAAATGCTCAAAATTGTCTTCATTGCAAGGTATTTGCCTCCATGTTGATTCAGTTGTCCATGGACATTTGCATCTTTTGTTTCCTGTAACTGAATGAAATGTTGACGGTATCTGCAGGCTTGTGACATCAAAGATCCAAAGCAAAACATCGAATGGACCGTTCCAGAAGGTGGAGGCGGCCCAGGGTACACAGTAATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033279